| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is proP [H]
Identifier: 158423113
GI number: 158423113
Start: 1689818
End: 1691116
Strand: Direct
Name: proP [H]
Synonym: AZC_1489
Alternate gene names: 158423113
Gene position: 1689818-1691116 (Clockwise)
Preceding gene: 158423111
Following gene: 158423114
Centisome position: 31.47
GC content: 68.36
Gene sequence:
>1299_bases ATGGCAAAGACGCTTGCGCGCTCGGGGCAGGGTGCCGCCGCGCCCGAAGGTGAAGGACGCCGCGCCGTTGCGGCGGCGGT CATCGGCAACATCCTCGAATGGTACGACTTCGCCATCTACGGCTATGTCGCCACCATCATCGCGCACAAGTTCTTCCCGC CGGGCGACGAGGTGAGCGGCCTGCTCGCCACCTTCGCCACCTTCGGCATCGGTTTTGCCGCCCGCCCCCTCGGCGGCATC CTCATTGGCCGGATGGGCGACACCCGCGGCCGCAAGGCTGCGCTCCTGCTCACCATCTTCACCATGGCCATTGGCACCGT GGGCATCGGCCTCATTCCCTCCTATGAGGTCATCGGCGTGCTGGCGCCGGTGCTGCTGGTGCTCTGCCGCCTGTTGCAGG GCTTCGCCGCCGGCGGCGAATGGGGCGGCGCCACCGCCTTCATCGTGGAATGGGCGCCCAGGAACCGGCGCGGCTATTTC GGCAGTTGGCAGCAGGCGAGTGTCGCCGGCGGCCTGCTCCTCGGCTCGGGCACCGCCGCCCTGTTCAGCACGCTGCTGAC GCCGGACCAGATGGACGCCTGGGGCTGGCGCATCCCCTTCATCCTCGGCATCATCCTGCTGCCGGTCGGCCTCTACATGC GGGCGAACATCGACGAGACGCCCGCCTATCGCGAGGCCCGGGCCGAGCCCGTGGCGCAGGCCCGCGTGCGGACACCGGGC TGGGTGCTGGCCGCCAAGGCGTTCGGCTTCACCATCCTCTGGACGGTGTCCTATTATGTGATCCTCTATTACATGCCCAC CTTCACCCAGAAGTATGCCGGCCTCAGCCGCACCGAGTCCCTGTGGTCGAACACGCTCGGGCTCGTGGTGCTGGCGGTGG TGATTCCGCTCATGGGCCTGTTGTCCGACCGCATCGGCCGCAAGCCCATGCTGCTCGCCTGCTGCGTGGCGTTCGTGGTG CTCACCTATCCGCTGTTCGCGGCGATGTCGGGCGGCGCGCCGCTGCTCACCGTGATGGCGATCCAGATCGTGTTCGGCAT CATGATCGCCATGTTCTCCGGGCCCGGCCCCGCCGCCATCGCCGAGATATTCCCGACCCACTCGCGCTCCACATGGATGT CCACGGGCTACAGCCTGGCGGTGACGGTGTTCGGCGGCTTTGCGCCCTTCATCGCCACCTGGCTGATCAGCACCACGGGC TCGCCGCTGGCGCCGACCTTCTATCTGATCGCCGCCGGCGTGGTGTCGGCCGTGGTCATCGCCCTGCTGCCGGAGACGGC GCACGACGATCTGGCCTGA
Upstream 100 bases:
>100_bases TCTCTCCCGGTACGATTTTAAGTATTACTATGCAATACGCTAGATCGTAATGCAATTAGTGGTGCGCACGCACCGGCAAT AACAAGCAGAGGGGTCCATC
Downstream 100 bases:
>100_bases CGGACCCGGCCTCCGCCCGGCGGCGGGGGCCATCCCACTTCGGGAGGCTGAGATGACGCTCGACTTCAACGGCAGGACGG TGGCCGTCTCCGGTGCCGGC
Product: general substrate transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MAKTLARSGQGAAAPEGEGRRAVAAAVIGNILEWYDFAIYGYVATIIAHKFFPPGDEVSGLLATFATFGIGFAARPLGGI LIGRMGDTRGRKAALLLTIFTMAIGTVGIGLIPSYEVIGVLAPVLLVLCRLLQGFAAGGEWGGATAFIVEWAPRNRRGYF GSWQQASVAGGLLLGSGTAALFSTLLTPDQMDAWGWRIPFILGIILLPVGLYMRANIDETPAYREARAEPVAQARVRTPG WVLAAKAFGFTILWTVSYYVILYYMPTFTQKYAGLSRTESLWSNTLGLVVLAVVIPLMGLLSDRIGRKPMLLACCVAFVV LTYPLFAAMSGGAPLLTVMAIQIVFGIMIAMFSGPGPAAIAEIFPTHSRSTWMSTGYSLAVTVFGGFAPFIATWLISTTG SPLAPTFYLIAAGVVSAVVIALLPETAHDDLA
Sequences:
>Translated_432_residues MAKTLARSGQGAAAPEGEGRRAVAAAVIGNILEWYDFAIYGYVATIIAHKFFPPGDEVSGLLATFATFGIGFAARPLGGI LIGRMGDTRGRKAALLLTIFTMAIGTVGIGLIPSYEVIGVLAPVLLVLCRLLQGFAAGGEWGGATAFIVEWAPRNRRGYF GSWQQASVAGGLLLGSGTAALFSTLLTPDQMDAWGWRIPFILGIILLPVGLYMRANIDETPAYREARAEPVAQARVRTPG WVLAAKAFGFTILWTVSYYVILYYMPTFTQKYAGLSRTESLWSNTLGLVVLAVVIPLMGLLSDRIGRKPMLLACCVAFVV LTYPLFAAMSGGAPLLTVMAIQIVFGIMIAMFSGPGPAAIAEIFPTHSRSTWMSTGYSLAVTVFGGFAPFIATWLISTTG SPLAPTFYLIAAGVVSAVVIALLPETAHDDLA >Mature_431_residues AKTLARSGQGAAAPEGEGRRAVAAAVIGNILEWYDFAIYGYVATIIAHKFFPPGDEVSGLLATFATFGIGFAARPLGGIL IGRMGDTRGRKAALLLTIFTMAIGTVGIGLIPSYEVIGVLAPVLLVLCRLLQGFAAGGEWGGATAFIVEWAPRNRRGYFG SWQQASVAGGLLLGSGTAALFSTLLTPDQMDAWGWRIPFILGIILLPVGLYMRANIDETPAYREARAEPVAQARVRTPGW VLAAKAFGFTILWTVSYYVILYYMPTFTQKYAGLSRTESLWSNTLGLVVLAVVIPLMGLLSDRIGRKPMLLACCVAFVVL TYPLFAAMSGGAPLLTVMAIQIVFGIMIAMFSGPGPAAIAEIFPTHSRSTWMSTGYSLAVTVFGGFAPFIATWLISTTGS PLAPTFYLIAAGVVSAVVIALLPETAHDDLA
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=435, Percent_Identity=34.9425287356322, Blast_Score=280, Evalue=1e-76, Organism=Escherichia coli, GI1788292, Length=424, Percent_Identity=34.4339622641509, Blast_Score=230, Evalue=1e-61, Organism=Escherichia coli, GI1789941, Length=432, Percent_Identity=35.4166666666667, Blast_Score=213, Evalue=3e-56, Organism=Escherichia coli, GI1788942, Length=408, Percent_Identity=32.5980392156863, Blast_Score=197, Evalue=9e-52, Organism=Escherichia coli, GI87082231, Length=220, Percent_Identity=29.0909090909091, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI87082404, Length=381, Percent_Identity=24.1469816272966, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 45804; Mature: 45673
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTLARSGQGAAAPEGEGRRAVAAAVIGNILEWYDFAIYGYVATIIAHKFFPPGDEVSG CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLATFATFGIGFAARPLGGILIGRMGDTRGRKAALLLTIFTMAIGTVGIGLIPSYEVIGV HHHHHHHHHCCHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LAPVLLVLCRLLQGFAAGGEWGGATAFIVEWAPRNRRGYFGSWQQASVAGGLLLGSGTAA HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHCCEEECCCHHH LFSTLLTPDQMDAWGWRIPFILGIILLPVGLYMRANIDETPAYREARAEPVAQARVRTPG HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHCCCCC WVLAAKAFGFTILWTVSYYVILYYMPTFTQKYAGLSRTESLWSNTLGLVVLAVVIPLMGL CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSDRIGRKPMLLACCVAFVVLTYPLFAAMSGGAPLLTVMAIQIVFGIMIAMFSGPGPAAI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH AEIFPTHSRSTWMSTGYSLAVTVFGGFAPFIATWLISTTGSPLAPTFYLIAAGVVSAVVI HHHCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ALLPETAHDDLA HHCCCCCCCCCC >Mature Secondary Structure AKTLARSGQGAAAPEGEGRRAVAAAVIGNILEWYDFAIYGYVATIIAHKFFPPGDEVSG CCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLATFATFGIGFAARPLGGILIGRMGDTRGRKAALLLTIFTMAIGTVGIGLIPSYEVIGV HHHHHHHHHCCHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LAPVLLVLCRLLQGFAAGGEWGGATAFIVEWAPRNRRGYFGSWQQASVAGGLLLGSGTAA HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHCCEEECCCHHH LFSTLLTPDQMDAWGWRIPFILGIILLPVGLYMRANIDETPAYREARAEPVAQARVRTPG HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHCCCCC WVLAAKAFGFTILWTVSYYVILYYMPTFTQKYAGLSRTESLWSNTLGLVVLAVVIPLMGL CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSDRIGRKPMLLACCVAFVVLTYPLFAAMSGGAPLLTVMAIQIVFGIMIAMFSGPGPAAI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH AEIFPTHSRSTWMSTGYSLAVTVFGGFAPFIATWLISTTGSPLAPTFYLIAAGVVSAVVI HHHCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ALLPETAHDDLA HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]