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The map label for this gene is yecS [H]

Identifier: 158423073

GI number: 158423073

Start: 1649998

End: 1650666

Strand: Direct

Name: yecS [H]

Synonym: AZC_1449

Alternate gene names: 158423073

Gene position: 1649998-1650666 (Clockwise)

Preceding gene: 158423071

Following gene: 158423074

Centisome position: 30.73

GC content: 63.08

Gene sequence:

>669_bases
ATGAACTACGTGCTTGATTTCACCCCCGTCATCGAGGGGCTGCCGGATCTGCTTGCCGGCTGCCTTGGCACCTTCGTGCT
GGCACTCGGCGGCATGGCGCTGGCCATCGTGATCGGCATCGGCGGTGTGCTGCTGCGCGACTCGCGCCACGCCCCCGTGC
GCTTCCTTGTGAAGGCCTTCGTGGAAGTCATCCGCAACACGCCGTTCCTGGTGCAGATCTTCTTCATCTATTTCGCCCTG
CCGCTGGCCGGCGTGCGTCTTGACCCGACACCCACCGCCATCATTGCGCTCGGCATCAATGGCGGGGCCTATGCCATCGA
GATCATTCGGGGCGGCGTGCAGTCCATCAGCCGTGGCCAGGTCGAGGCGGGGCTGGCGCTCGGCCTGCACAAGGCTCTGG
TGTTCCGGCTCATCGTGCTGAAGCCGGCGCTGCGGGCTGTTTATCCCTCGCTTACCAGCCAGTTCATCCTTCTGACGCTG
ACCACCAGCATCGCCTCGGCGATTTCCGCCTATGAGCTGACCTCGGTGGCCCAGCGCATCGAATCCGACAGCTTCCGCAG
CTTCGAGGTCTTCGGCACGGCGACGTTCATGTATCTCGTGATCTCCTGGATGATGATGCGCTTCTTCGCGCTCATCTCCG
CCCGCTACTTCAGCTATCCGGTCAAGTGA

Upstream 100 bases:

>100_bases
GAGCGCAAGTCGCCTCTCCGCGATGCGCCAGATGCGCGCAGACGCATCGGCGAAGGTGCAACGGACCGTCCCGCAGAAGG
GCGGCTGTCGAGGAAACGCC

Downstream 100 bases:

>100_bases
GGAGCGTGGGATGCATCTGGGCGAATTCCTCTTCCTCCTTCAGGGCCTGAAGTGGACGGTCATCCTCTCCGCCATCGCCT
TCGTGCTCGGGGGTGTCGGC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNYVLDFTPVIEGLPDLLAGCLGTFVLALGGMALAIVIGIGGVLLRDSRHAPVRFLVKAFVEVIRNTPFLVQIFFIYFAL
PLAGVRLDPTPTAIIALGINGGAYAIEIIRGGVQSISRGQVEAGLALGLHKALVFRLIVLKPALRAVYPSLTSQFILLTL
TTSIASAISAYELTSVAQRIESDSFRSFEVFGTATFMYLVISWMMMRFFALISARYFSYPVK

Sequences:

>Translated_222_residues
MNYVLDFTPVIEGLPDLLAGCLGTFVLALGGMALAIVIGIGGVLLRDSRHAPVRFLVKAFVEVIRNTPFLVQIFFIYFAL
PLAGVRLDPTPTAIIALGINGGAYAIEIIRGGVQSISRGQVEAGLALGLHKALVFRLIVLKPALRAVYPSLTSQFILLTL
TTSIASAISAYELTSVAQRIESDSFRSFEVFGTATFMYLVISWMMMRFFALISARYFSYPVK
>Mature_222_residues
MNYVLDFTPVIEGLPDLLAGCLGTFVLALGGMALAIVIGIGGVLLRDSRHAPVRFLVKAFVEVIRNTPFLVQIFFIYFAL
PLAGVRLDPTPTAIIALGINGGAYAIEIIRGGVQSISRGQVEAGLALGLHKALVFRLIVLKPALRAVYPSLTSQFILLTL
TTSIASAISAYELTSVAQRIESDSFRSFEVFGTATFMYLVISWMMMRFFALISARYFSYPVK

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=193, Percent_Identity=37.3056994818653, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787030, Length=199, Percent_Identity=38.1909547738693, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1786873, Length=208, Percent_Identity=34.1346153846154, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788645, Length=199, Percent_Identity=27.1356783919598, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1786874, Length=183, Percent_Identity=29.5081967213115, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=26.1682242990654, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082239, Length=199, Percent_Identity=30.1507537688442, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788646, Length=211, Percent_Identity=24.6445497630332, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787087, Length=196, Percent_Identity=26.0204081632653, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI48994930, Length=121, Percent_Identity=33.0578512396694, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24159; Mature: 24159

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYVLDFTPVIEGLPDLLAGCLGTFVLALGGMALAIVIGIGGVLLRDSRHAPVRFLVKAF
CCCEECHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHHHHH
VEVIRNTPFLVQIFFIYFALPLAGVRLDPTPTAIIALGINGGAYAIEIIRGGVQSISRGQ
HHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCH
VEAGLALGLHKALVFRLIVLKPALRAVYPSLTSQFILLTLTTSIASAISAYELTSVAQRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESDSFRSFEVFGTATFMYLVISWMMMRFFALISARYFSYPVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNYVLDFTPVIEGLPDLLAGCLGTFVLALGGMALAIVIGIGGVLLRDSRHAPVRFLVKAF
CCCEECHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHHHHH
VEVIRNTPFLVQIFFIYFALPLAGVRLDPTPTAIIALGINGGAYAIEIIRGGVQSISRGQ
HHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCH
VEAGLALGLHKALVFRLIVLKPALRAVYPSLTSQFILLTLTTSIASAISAYELTSVAQRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESDSFRSFEVFGTATFMYLVISWMMMRFFALISARYFSYPVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]