Click here to switch to the map view.

The map label for this gene is ydhJ [H]

Identifier: 158422981

GI number: 158422981

Start: 1530664

End: 1531608

Strand: Reverse

Name: ydhJ [H]

Synonym: AZC_1357

Alternate gene names: 158422981

Gene position: 1531608-1530664 (Counterclockwise)

Preceding gene: 158422982

Following gene: 158422980

Centisome position: 28.52

GC content: 66.88

Gene sequence:

>945_bases
ATGACCGCAATCGACATGCCTGCCGGGAACCAGAAATCGTATATCGGCCAGATCCTGCGGGTGCTGGCGACGCTGATCGC
CGCCGCCCTCGCCGGCGGGCTTGGCTGGAGGATGTGGGACACCTACATGTCCACGCCCTGGACCCGCGACGGCACGGTGC
GGGCCTATGTGGTCACGGTCGCACCGCAGGTCTCCGGCCGCATCGTCGAACTGCCGGTGAAGGCCGACCAATTCGTCCAC
AAGGGAGACCTGCTGATGGTAATCGAACCCGATGACTATCAGATCGCCCTTGCCAATGCGGAGGCCAATGTCGCCCGCGC
CAAGGCGGACCTCGAGAACAAGCAAGCCGAGGCGGAACGCCGGCTACACCTCAGCGCCCTGGCCGTCTCCGACGAGGAGA
AGCAGAGCTTCGCGGCGACCGCCAACATGGCGCTCGCCGCCTATCAGCAGGCCCTCGCCGATCGCGACAAGGCCAAGCTC
GACCTCAGCCGGACCCGCATCGTCTCGCCTGTTAACGGCTATGTCACGAACCTGCTCACCCAGGTCGGCGACTTCGCCAC
GACCGGCCAGAGAGCGCTCTCGGTCGTGGACAGCGACAGCTTCTGGGTGGACGGCTATTTCGAGGAAACGCTGCTCAACT
CCATCCATGTGGGCGACCGGGCGGAGGTGGCCCTGATGGCCTATCCGGAGCGCCTTAGCGGACACGTGACCGGCATCGGC
CGCGGTATTGCCGTCCCCAACGCGCAGCCGGATGGATCGGGCCTCGCCACCGTCAATCCCGTCTTCACCTGGGTGCGCCT
CGCGCAGCGCGTGCCGGTCCGCGTCGTGCTTGATGACGTCCCGCCGTCCATCGTCCTGTCGGCGGGGCTCACCGCGAGCA
TCACCATCCTTGACGGCACCGCGCCCACGAGCGCCGCCGCGCCTGCTCAATCGGCGCACCGATGA

Upstream 100 bases:

>100_bases
CTCGCTCATCGTGATCGCCTACGGGGGCCGTCCGTGACCGCCGCCCCGCTTACGACGCAGCCCATCCATCCTGTCTGAAT
CCTCGCCGTGGGAGCCCACC

Downstream 100 bases:

>100_bases
GCGGCCCGTGCGCCGCTCTGCCCGCGCATACCCATGTATGGCGGGTGCATCTGTCGATCTGATTCAATCTCCAGCCGAAC
GCACCATAGTTCATCCATGA

Product: membrane fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTAIDMPAGNQKSYIGQILRVLATLIAAALAGGLGWRMWDTYMSTPWTRDGTVRAYVVTVAPQVSGRIVELPVKADQFVH
KGDLLMVIEPDDYQIALANAEANVARAKADLENKQAEAERRLHLSALAVSDEEKQSFAATANMALAAYQQALADRDKAKL
DLSRTRIVSPVNGYVTNLLTQVGDFATTGQRALSVVDSDSFWVDGYFEETLLNSIHVGDRAEVALMAYPERLSGHVTGIG
RGIAVPNAQPDGSGLATVNPVFTWVRLAQRVPVRVVLDDVPPSIVLSAGLTASITILDGTAPTSAAAPAQSAHR

Sequences:

>Translated_314_residues
MTAIDMPAGNQKSYIGQILRVLATLIAAALAGGLGWRMWDTYMSTPWTRDGTVRAYVVTVAPQVSGRIVELPVKADQFVH
KGDLLMVIEPDDYQIALANAEANVARAKADLENKQAEAERRLHLSALAVSDEEKQSFAATANMALAAYQQALADRDKAKL
DLSRTRIVSPVNGYVTNLLTQVGDFATTGQRALSVVDSDSFWVDGYFEETLLNSIHVGDRAEVALMAYPERLSGHVTGIG
RGIAVPNAQPDGSGLATVNPVFTWVRLAQRVPVRVVLDDVPPSIVLSAGLTASITILDGTAPTSAAAPAQSAHR
>Mature_313_residues
TAIDMPAGNQKSYIGQILRVLATLIAAALAGGLGWRMWDTYMSTPWTRDGTVRAYVVTVAPQVSGRIVELPVKADQFVHK
GDLLMVIEPDDYQIALANAEANVARAKADLENKQAEAERRLHLSALAVSDEEKQSFAATANMALAAYQQALADRDKAKLD
LSRTRIVSPVNGYVTNLLTQVGDFATTGQRALSVVDSDSFWVDGYFEETLLNSIHVGDRAEVALMAYPERLSGHVTGIGR
GIAVPNAQPDGSGLATVNPVFTWVRLAQRVPVRVVLDDVPPSIVLSAGLTASITILDGTAPTSAAAPAQSAHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=284, Percent_Identity=45.0704225352113, Blast_Score=240, Evalue=8e-65,
Organism=Escherichia coli, GI1789637, Length=285, Percent_Identity=38.5964912280702, Blast_Score=179, Evalue=1e-46,
Organism=Escherichia coli, GI1790519, Length=299, Percent_Identity=31.1036789297659, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI1788711, Length=341, Percent_Identity=29.3255131964809, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1789041, Length=332, Percent_Identity=26.2048192771084, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 33560; Mature: 33429

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIDMPAGNQKSYIGQILRVLATLIAAALAGGLGWRMWDTYMSTPWTRDGTVRAYVVTV
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEE
APQVSGRIVELPVKADQFVHKGDLLMVIEPDDYQIALANAEANVARAKADLENKQAEAER
CCCCCCEEEEECCCHHHHEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
RLHLSALAVSDEEKQSFAATANMALAAYQQALADRDKAKLDLSRTRIVSPVNGYVTNLLT
HHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHCCCCHHHHHHHHHH
QVGDFATTGQRALSVVDSDSFWVDGYFEETLLNSIHVGDRAEVALMAYPERLSGHVTGIG
HHCCHHCCCHHHEEEECCCCEEECCHHHHHHHHHCCCCCCCCEEEEECCHHHCCCEEEEC
RGIAVPNAQPDGSGLATVNPVFTWVRLAQRVPVRVVLDDVPPSIVLSAGLTASITILDGT
CCEECCCCCCCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCEEEEEEEECC
APTSAAAPAQSAHR
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TAIDMPAGNQKSYIGQILRVLATLIAAALAGGLGWRMWDTYMSTPWTRDGTVRAYVVTV
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEE
APQVSGRIVELPVKADQFVHKGDLLMVIEPDDYQIALANAEANVARAKADLENKQAEAER
CCCCCCEEEEECCCHHHHEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
RLHLSALAVSDEEKQSFAATANMALAAYQQALADRDKAKLDLSRTRIVSPVNGYVTNLLT
HHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHCCCCHHHHHHHHHH
QVGDFATTGQRALSVVDSDSFWVDGYFEETLLNSIHVGDRAEVALMAYPERLSGHVTGIG
HHCCHHCCCHHHEEEECCCCEEECCHHHHHHHHHCCCCCCCCEEEEECCHHHCCCEEEEC
RGIAVPNAQPDGSGLATVNPVFTWVRLAQRVPVRVVLDDVPPSIVLSAGLTASITILDGT
CCEECCCCCCCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCEEEEEEEECC
APTSAAAPAQSAHR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]