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The map label for this gene is yybR [H]

Identifier: 158422910

GI number: 158422910

Start: 1440080

End: 1440457

Strand: Reverse

Name: yybR [H]

Synonym: AZC_1286

Alternate gene names: 158422910

Gene position: 1440457-1440080 (Counterclockwise)

Preceding gene: 158422915

Following gene: 158422903

Centisome position: 26.83

GC content: 58.47

Gene sequence:

>378_bases
ATGACCCTTAGTGACATTGATTTTCCTACCCCCGGCGAAGGGGACGACTGTCGGATGGTCCGGGAAATCCTTGATCTCAT
CGGCGACAAGTGGACCCTGTACATCATCGCGACGCTCAAGGATGGGCCCGTACGGTTCAATGAACTGCGGCGTCGCATCG
ACGGCATTTCTCAGCGGATGCTAACGATTAACCTGCGCAGTCTGGAACGTGACGGGTTGGTGAAGCGGACCTTGTTTCCC
ACGATTCCGCCGCGCGTCGACTACGAACTCACGGATGTGGGGCGGACGCTTCTCGCGCCCGTCATGACGCTCGTGACATG
GGCGAACAGCAATCAGGAGAACATCAAAGGCGCCCGCATCCGATACGACGCCAGCTAG

Upstream 100 bases:

>100_bases
GGATGCTGGTCATGGATTGCTCCGACGGGAACAGGGCGGTAATTTCTTGTTACCGACGCTATTAAAGTGACCGCCACGCT
GCTCGCAAGAAGGCACTCCG

Downstream 100 bases:

>100_bases
TTGGTATGGGATATCACCTACCGGATTCGGTGCGCTGTCGCGGGACCAAGGTCGATCGAAGGGCTGCTTCCCCCTAAAAG
CGTAAGCGTCGTCTTCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTLSDIDFPTPGEGDDCRMVREILDLIGDKWTLYIIATLKDGPVRFNELRRRIDGISQRMLTINLRSLERDGLVKRTLFP
TIPPRVDYELTDVGRTLLAPVMTLVTWANSNQENIKGARIRYDAS

Sequences:

>Translated_125_residues
MTLSDIDFPTPGEGDDCRMVREILDLIGDKWTLYIIATLKDGPVRFNELRRRIDGISQRMLTINLRSLERDGLVKRTLFP
TIPPRVDYELTDVGRTLLAPVMTLVTWANSNQENIKGARIRYDAS
>Mature_124_residues
TLSDIDFPTPGEGDDCRMVREILDLIGDKWTLYIIATLKDGPVRFNELRRRIDGISQRMLTINLRSLERDGLVKRTLFPT
IPPRVDYELTDVGRTLLAPVMTLVTWANSNQENIKGARIRYDAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=99, Percent_Identity=36.3636363636364, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14307; Mature: 14176

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSDIDFPTPGEGDDCRMVREILDLIGDKWTLYIIATLKDGPVRFNELRRRIDGISQRM
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHE
LTINLRSLERDGLVKRTLFPTIPPRVDYELTDVGRTLLAPVMTLVTWANSNQENIKGARI
EEEEHHHCCCCCCCHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
RYDAS
EECCC
>Mature Secondary Structure 
TLSDIDFPTPGEGDDCRMVREILDLIGDKWTLYIIATLKDGPVRFNELRRRIDGISQRM
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHE
LTINLRSLERDGLVKRTLFPTIPPRVDYELTDVGRTLLAPVMTLVTWANSNQENIKGARI
EEEEHHHCCCCCCCHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
RYDAS
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]