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The map label for this gene is soxA [H]

Identifier: 158422862

GI number: 158422862

Start: 1387637

End: 1388764

Strand: Direct

Name: soxA [H]

Synonym: AZC_1238

Alternate gene names: 158422862

Gene position: 1387637-1388764 (Clockwise)

Preceding gene: 158422861

Following gene: 158422863

Centisome position: 25.84

GC content: 69.68

Gene sequence:

>1128_bases
ATGGCGCGGCCGGATGTCCTGATCATCGGCGGCGGCCTGCACGGCTGCTCAACAGCCTTGCATCTCGCCCGGCGCGGCGT
GAAGGCGCTGGTGATTGAGAAGGACCACGCCGGCCGCCATGCCTCCGGCGTCAATGCAGGCGGGGTGCGGCGGCTCGGCC
GCGCCTTCGCGGAGGTGCCGCTCTCCGTCGCCTCCATGGAACTATGGCATTCCATCCGCGATCTGGTGGATGACGACTGC
GGCTTCGAGAGCCACGGGCAGGTGAAGGTGGCGGAGGACGAGGGCGACCTCGCGCTCCTCGCCGAGCGGGTGGCCAGGCT
CAATGCGCTCGGCTTCACCCATGAGGAACTGATTGCGCAGGACGAATTGCGGGCGCTGCTGCCCGCCGTCTCGCCCCATT
GCGTGGGCGGCATCGTCTCGCGGGCGGATGGGGCGGCGCTGCCCTTCCGAACCGTGCTCGCTTTCCGCAATGCCGCCATC
CGCCTCGGCGCGACCTTTCTCGAAGGCCGCCCGGCAGGCCTGCCGGAGCGGCGGGGCGGCCTGTGGCGGGTACAGGTGGG
GGGCAAGACGCACGAGGCCCCCGTGCTGGTGAACGCCGCCGGAGCCTGGGCGGACCGCATCGCTGCGGCGCTGGGCGAGC
CGGTGCCGCTTGAGGTGATCGCCCCCATGCTGATGATCACCTTGCGGATGCCACCTTTCGTGAAGCCGGTGGTGGGCGCA
ACGCGGCGCCCGCTTTCTTTCAAGCAATATGCCAACGGCACGGTGCTGATTGGCGGCGGGCACCGCGGTATCGCGGATCG
CGACACCAACCGCACGTCGCTCGATTTCGGCAAGCTCGCCTTCAACGCCCGCACGGCGGCGGAGATCTTCCCCATCATGG
CGGAGGCGCAGATCAACCGCGCCTGGGCGGGCATCGAGGCGCGGATGCCCGACGACATCCCCGTGATTGGCCCGAGCCTT
CAGGCCGAAGCCGCCTATCACGCCTTCGGCTTCTCCGCCCACGGCTTCCAGCTCGGCCCCATCGTGGGCAGCATTCTCGC
GGAACTAGTCACCACGGGCGCCAGCAACCTGCCCATTGCGCCCTTTTCCATCGGCCGGTTCGCCGCCCCAGTGGCGCAGG
CGGGATGA

Upstream 100 bases:

>100_bases
CATTACCGCCTGCGGGCGCCGGTAAAGCCCATTTCGGTGGCTGAACTCGCCTCCCTGCCACGGGACGAGACGGCCATGAA
ATCGGTGGAGCGGGGCTGAG

Downstream 100 bases:

>100_bases
GGCTTTTCACGCGCGCCGGGCCGTTCTAAATGCGGGATAGGGCCGTCCCTGCCCTGCCCAAAGAAAGCCCCGCGCCATGA
CCGTCGCCGCCGCCCTCGCC

Product: sarcosine oxidase subunit beta

Products: NA

Alternate protein names: MSOX [H]

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MARPDVLIIGGGLHGCSTALHLARRGVKALVIEKDHAGRHASGVNAGGVRRLGRAFAEVPLSVASMELWHSIRDLVDDDC
GFESHGQVKVAEDEGDLALLAERVARLNALGFTHEELIAQDELRALLPAVSPHCVGGIVSRADGAALPFRTVLAFRNAAI
RLGATFLEGRPAGLPERRGGLWRVQVGGKTHEAPVLVNAAGAWADRIAAALGEPVPLEVIAPMLMITLRMPPFVKPVVGA
TRRPLSFKQYANGTVLIGGGHRGIADRDTNRTSLDFGKLAFNARTAAEIFPIMAEAQINRAWAGIEARMPDDIPVIGPSL
QAEAAYHAFGFSAHGFQLGPIVGSILAELVTTGASNLPIAPFSIGRFAAPVAQAG

Sequences:

>Translated_375_residues
MARPDVLIIGGGLHGCSTALHLARRGVKALVIEKDHAGRHASGVNAGGVRRLGRAFAEVPLSVASMELWHSIRDLVDDDC
GFESHGQVKVAEDEGDLALLAERVARLNALGFTHEELIAQDELRALLPAVSPHCVGGIVSRADGAALPFRTVLAFRNAAI
RLGATFLEGRPAGLPERRGGLWRVQVGGKTHEAPVLVNAAGAWADRIAAALGEPVPLEVIAPMLMITLRMPPFVKPVVGA
TRRPLSFKQYANGTVLIGGGHRGIADRDTNRTSLDFGKLAFNARTAAEIFPIMAEAQINRAWAGIEARMPDDIPVIGPSL
QAEAAYHAFGFSAHGFQLGPIVGSILAELVTTGASNLPIAPFSIGRFAAPVAQAG
>Mature_374_residues
ARPDVLIIGGGLHGCSTALHLARRGVKALVIEKDHAGRHASGVNAGGVRRLGRAFAEVPLSVASMELWHSIRDLVDDDCG
FESHGQVKVAEDEGDLALLAERVARLNALGFTHEELIAQDELRALLPAVSPHCVGGIVSRADGAALPFRTVLAFRNAAIR
LGATFLEGRPAGLPERRGGLWRVQVGGKTHEAPVLVNAAGAWADRIAAALGEPVPLEVIAPMLMITLRMPPFVKPVVGAT
RRPLSFKQYANGTVLIGGGHRGIADRDTNRTSLDFGKLAFNARTAAEIFPIMAEAQINRAWAGIEARMPDDIPVIGPSLQ
AEAAYHAFGFSAHGFQLGPIVGSILAELVTTGASNLPIAPFSIGRFAAPVAQAG

Specific function: Catalyzes the oxidative demethylation of sarcosine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MSOX/MTOX family. MSOX subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797151, Length=388, Percent_Identity=23.7113402061856, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI197927446, Length=385, Percent_Identity=23.3766233766234, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI21361378, Length=385, Percent_Identity=23.3766233766234, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI20130091, Length=385, Percent_Identity=27.012987012987, Blast_Score=106, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR006281 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.5.3.1 [H]

Molecular weight: Translated: 39485; Mature: 39354

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPDVLIIGGGLHGCSTALHLARRGVKALVIEKDHAGRHASGVNAGGVRRLGRAFAEVP
CCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
LSVASMELWHSIRDLVDDDCGFESHGQVKVAEDEGDLALLAERVARLNALGFTHEELIAQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHH
DELRALLPAVSPHCVGGIVSRADGAALPFRTVLAFRNAAIRLGATFLEGRPAGLPERRGG
HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECHHHCCCCCCCCCHHCCC
LWRVQVGGKTHEAPVLVNAAGAWADRIAAALGEPVPLEVIAPMLMITLRMPPFVKPVVGA
EEEEEECCCCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHCC
TRRPLSFKQYANGTVLIGGGHRGIADRDTNRTSLDFGKLAFNARTAAEIFPIMAEAQINR
CCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHH
AWAGIEARMPDDIPVIGPSLQAEAAYHAFGFSAHGFQLGPIVGSILAELVTTGASNLPIA
HHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCC
PFSIGRFAAPVAQAG
CCCCHHHHCCHHCCC
>Mature Secondary Structure 
ARPDVLIIGGGLHGCSTALHLARRGVKALVIEKDHAGRHASGVNAGGVRRLGRAFAEVP
CCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
LSVASMELWHSIRDLVDDDCGFESHGQVKVAEDEGDLALLAERVARLNALGFTHEELIAQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHH
DELRALLPAVSPHCVGGIVSRADGAALPFRTVLAFRNAAIRLGATFLEGRPAGLPERRGG
HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECHHHCCCCCCCCCHHCCC
LWRVQVGGKTHEAPVLVNAAGAWADRIAAALGEPVPLEVIAPMLMITLRMPPFVKPVVGA
EEEEEECCCCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHCC
TRRPLSFKQYANGTVLIGGGHRGIADRDTNRTSLDFGKLAFNARTAAEIFPIMAEAQINR
CCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHH
AWAGIEARMPDDIPVIGPSLQAEAAYHAFGFSAHGFQLGPIVGSILAELVTTGASNLPIA
HHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCC
PFSIGRFAAPVAQAG
CCCCHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368683 [H]