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The map label for this gene is 158422863

Identifier: 158422863

GI number: 158422863

Start: 1388841

End: 1389986

Strand: Direct

Name: 158422863

Synonym: AZC_1239

Alternate gene names: NA

Gene position: 1388841-1389986 (Clockwise)

Preceding gene: 158422862

Following gene: 158422867

Centisome position: 25.86

GC content: 70.77

Gene sequence:

>1146_bases
ATGACCGTCGCCGCCGCCCTCGCCGACCTTCCCACCCCATGCCTCATCCTCGATGAGGCGCGCATGCTGCGGAACATCGC
CCGGCTCAAGACGCATCTGGACGGCCTCGGCGTTGCGCTGCGTCCGCACCTGAAAACGCTGAAGAGCGTGGAGGCCGCTC
GCCGTGTGCTGAAGGACGGGAATGGCCCTGCGACGGTCTCCACGCTGAAGGAGGCGGAGGTGTTCGCCGCCGCCGGCGTG
CGCGACATCATCTATGCGGTGGGCATCGCCCCGCAGAAGCTGCCGCGCGTGATCGCCCTGCGCGGCGCGGGCTGCGATCT
CGCCGTGGTGCTGGATACGCGCGTGCAGGCTGCGGCGGTCGCCGCCATGTCGCGGGCCGTGGGGGACGCCATTCCGGCGC
TGATCGAGATCGACTGCGACGGCCATCGCGCCGGTCTCAAGCCGGATGATCCGGAGATCGTCGCCATCGGCCGCATCCTG
CACGAGGGCGGCGCGCAACTGCGCGGCGTGCTCTGCCATTCCGGCGGCAGTTACGGGCAAGTGGGTCCCGAGGCGCTCGC
AGACTTTGCCGAGCAGGAGCGCGCGGCGATCGTGGCAGCCGCCGAGACCCTGCGCGCCGCCGGCCTGCCGTGCCCGGTGG
TCAGCGTCGGCTCCACCCCCACCGCCCATTTCGCCCGCGATCTCACCGGCGTGACGGAAGTGCGCGCCGGCGTCTATGTC
TCCCAGGATCTGGTGATGGCGGGCATCGGCGTGTGCACGCCGGATGATATCGCCCTCTCGGTCCTCGCCACCGTCATCGG
TCACCAGAGCGAGCGCGGCTGGACGCTGGTGGATGCGGGCTGGATGGCCCTTTCCCGCGATCGTGGCACCGCCTCGCAGG
CGGTCGATCAGGGCTATGGCCTGGTGTGCGACGTCGAGGGACAGGTGATCCCGGATCTCATCGTTGTGGGCGCCAATCAG
GAGCACGGCATCATCGGCCTGCGGGCGGGCAGCACGGCCACCGCGCCGGACCTGCCCGTGGGGGCGCAGGTGCGCATCCT
GCCCAACCATGCCTGCGCCACCGCCACCGAGTTCGACGATTATGCGGTGCTGCCGGCGGACGGCAGCGCCCATATCGCCC
GCTGGTCCCGCTTCCGGGGCTGGTGA

Upstream 100 bases:

>100_bases
GCCCCAGTGGCGCAGGCGGGATGAGGCTTTTCACGCGCGCCGGGCCGTTCTAAATGCGGGATAGGGCCGTCCCTGCCCTG
CCCAAAGAAAGCCCCGCGCC

Downstream 100 bases:

>100_bases
GGGATCGGCAGGCCCGGCTCACGTCCGGGCCTGACGTTTCGTCTCAGTTCAGTATTCCGCCGTGCCTTCGAGGAAGAAGA
CGCACGCGCCCTCGATGAGC

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTVAAALADLPTPCLILDEARMLRNIARLKTHLDGLGVALRPHLKTLKSVEAARRVLKDGNGPATVSTLKEAEVFAAAGV
RDIIYAVGIAPQKLPRVIALRGAGCDLAVVLDTRVQAAAVAAMSRAVGDAIPALIEIDCDGHRAGLKPDDPEIVAIGRIL
HEGGAQLRGVLCHSGGSYGQVGPEALADFAEQERAAIVAAAETLRAAGLPCPVVSVGSTPTAHFARDLTGVTEVRAGVYV
SQDLVMAGIGVCTPDDIALSVLATVIGHQSERGWTLVDAGWMALSRDRGTASQAVDQGYGLVCDVEGQVIPDLIVVGANQ
EHGIIGLRAGSTATAPDLPVGAQVRILPNHACATATEFDDYAVLPADGSAHIARWSRFRGW

Sequences:

>Translated_381_residues
MTVAAALADLPTPCLILDEARMLRNIARLKTHLDGLGVALRPHLKTLKSVEAARRVLKDGNGPATVSTLKEAEVFAAAGV
RDIIYAVGIAPQKLPRVIALRGAGCDLAVVLDTRVQAAAVAAMSRAVGDAIPALIEIDCDGHRAGLKPDDPEIVAIGRIL
HEGGAQLRGVLCHSGGSYGQVGPEALADFAEQERAAIVAAAETLRAAGLPCPVVSVGSTPTAHFARDLTGVTEVRAGVYV
SQDLVMAGIGVCTPDDIALSVLATVIGHQSERGWTLVDAGWMALSRDRGTASQAVDQGYGLVCDVEGQVIPDLIVVGANQ
EHGIIGLRAGSTATAPDLPVGAQVRILPNHACATATEFDDYAVLPADGSAHIARWSRFRGW
>Mature_380_residues
TVAAALADLPTPCLILDEARMLRNIARLKTHLDGLGVALRPHLKTLKSVEAARRVLKDGNGPATVSTLKEAEVFAAAGVR
DIIYAVGIAPQKLPRVIALRGAGCDLAVVLDTRVQAAAVAAMSRAVGDAIPALIEIDCDGHRAGLKPDDPEIVAIGRILH
EGGAQLRGVLCHSGGSYGQVGPEALADFAEQERAAIVAAAETLRAAGLPCPVVSVGSTPTAHFARDLTGVTEVRAGVYVS
QDLVMAGIGVCTPDDIALSVLATVIGHQSERGWTLVDAGWMALSRDRGTASQAVDQGYGLVCDVEGQVIPDLIVVGANQE
HGIIGLRAGSTATAPDLPVGAQVRILPNHACATATEFDDYAVLPADGSAHIARWSRFRGW

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 39526; Mature: 39395

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAAALADLPTPCLILDEARMLRNIARLKTHLDGLGVALRPHLKTLKSVEAARRVLKDG
CCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCC
NGPATVSTLKEAEVFAAAGVRDIIYAVGIAPQKLPRVIALRGAGCDLAVVLDTRVQAAAV
CCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCEEEEEECCCCCEEEEECCCHHHHHH
AAMSRAVGDAIPALIEIDCDGHRAGLKPDDPEIVAIGRILHEGGAQLRGVLCHSGGSYGQ
HHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEECCCCCCC
VGPEALADFAEQERAAIVAAAETLRAAGLPCPVVSVGSTPTAHFARDLTGVTEVRAGVYV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCEEE
SQDLVMAGIGVCTPDDIALSVLATVIGHQSERGWTLVDAGWMALSRDRGTASQAVDQGYG
CHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCHHHHHHCCCC
LVCDVEGQVIPDLIVVGANQEHGIIGLRAGSTATAPDLPVGAQVRILPNHACATATEFDD
EEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
YAVLPADGSAHIARWSRFRGW
EEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TVAAALADLPTPCLILDEARMLRNIARLKTHLDGLGVALRPHLKTLKSVEAARRVLKDG
CHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCC
NGPATVSTLKEAEVFAAAGVRDIIYAVGIAPQKLPRVIALRGAGCDLAVVLDTRVQAAAV
CCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCEEEEEECCCCCEEEEECCCHHHHHH
AAMSRAVGDAIPALIEIDCDGHRAGLKPDDPEIVAIGRILHEGGAQLRGVLCHSGGSYGQ
HHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEECCCCCCC
VGPEALADFAEQERAAIVAAAETLRAAGLPCPVVSVGSTPTAHFARDLTGVTEVRAGVYV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCEEE
SQDLVMAGIGVCTPDDIALSVLATVIGHQSERGWTLVDAGWMALSRDRGTASQAVDQGYG
CHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCHHHHHHCCCC
LVCDVEGQVIPDLIVVGANQEHGIIGLRAGSTATAPDLPVGAQVRILPNHACATATEFDD
EEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
YAVLPADGSAHIARWSRFRGW
EEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]