| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yccV [C]
Identifier: 158422850
GI number: 158422850
Start: 1376170
End: 1376616
Strand: Reverse
Name: yccV [C]
Synonym: AZC_1226
Alternate gene names: 158422850
Gene position: 1376616-1376170 (Counterclockwise)
Preceding gene: 158422851
Following gene: 158422849
Centisome position: 25.64
GC content: 68.9
Gene sequence:
>447_bases ATGGCACGGTCGGTGAAGGAACAGGCGCGGACAGACGCACCGGGCGCGACGCCCCGGCGTACACGCCGCCCCGCCCGCAC CAGCCGGGCGACGCCCGAGGCGGCTGTGGCCGCGGACACCCGCACGCGCACCGCTCGATTCCGCATCGGCGACGTGGTGC GCCACCGGCACTTCCCCTTCCGGGGCGTGGTGTTCGACGTGGACCCGGTCTTTGACAATACCGAGGAATGGTATCTGTCG ATCCCGGAGGAGATCCGCCCCCGCAAGGACCAGCCCTTCTACCACCTGCTGGCCGAGAATGCGGACAATGAATACGTGGC CTATGTGTCGGAGCAGAATCTGGAGCCGGACACGTCCAATGAGCCGGTGCGCCACCCACGTGTGGCCGAGGCCCTCGCCT CGGACGGAACCGGCGGCTGGAAGGTGCGGCGCGACCTCCTGAACTGA
Upstream 100 bases:
>100_bases CATCCCCAGGGCGTGGGCCGGCGTATCAGGGTTAAGGAGTGGTGAAGATCGCGGCGTTGCGTTATGTGACGGCGCAGCGA CACACGGGAGATTCACGGGA
Downstream 100 bases:
>100_bases CAGGATCGAGCCGGAAATCCGGACGTTTGATAGCTGGCGATAGATTGGCAAGCCAGCCTGCTAATCATACCTCCTACCGG TCAGCCCCGCGCAAGCATTC
Product: hemimethylated DNA-binding region protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MARSVKEQARTDAPGATPRRTRRPARTSRATPEAAVAADTRTRTARFRIGDVVRHRHFPFRGVVFDVDPVFDNTEEWYLS IPEEIRPRKDQPFYHLLAENADNEYVAYVSEQNLEPDTSNEPVRHPRVAEALASDGTGGWKVRRDLLN
Sequences:
>Translated_148_residues MARSVKEQARTDAPGATPRRTRRPARTSRATPEAAVAADTRTRTARFRIGDVVRHRHFPFRGVVFDVDPVFDNTEEWYLS IPEEIRPRKDQPFYHLLAENADNEYVAYVSEQNLEPDTSNEPVRHPRVAEALASDGTGGWKVRRDLLN >Mature_147_residues ARSVKEQARTDAPGATPRRTRRPARTSRATPEAAVAADTRTRTARFRIGDVVRHRHFPFRGVVFDVDPVFDNTEEWYLSI PEEIRPRKDQPFYHLLAENADNEYVAYVSEQNLEPDTSNEPVRHPRVAEALASDGTGGWKVRRDLLN
Specific function: Unknown
COG id: COG3785
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16926; Mature: 16795
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSVKEQARTDAPGATPRRTRRPARTSRATPEAAVAADTRTRTARFRIGDVVRHRHFPF CCCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHHCCCCC RGVVFDVDPVFDNTEEWYLSIPEEIRPRKDQPFYHLLAENADNEYVAYVSEQNLEPDTSN CCEEEECCCCCCCCCCEEEECCHHHCCCCCCCCEEHEECCCCCCEEEEEECCCCCCCCCC EPVRHPRVAEALASDGTGGWKVRRDLLN CCCCCCHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure ARSVKEQARTDAPGATPRRTRRPARTSRATPEAAVAADTRTRTARFRIGDVVRHRHFPF CCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHHCCCCC RGVVFDVDPVFDNTEEWYLSIPEEIRPRKDQPFYHLLAENADNEYVAYVSEQNLEPDTSN CCEEEECCCCCCCCCCEEEECCHHHCCCCCCCCEEHEECCCCCCEEEEEECCCCCCCCCC EPVRHPRVAEALASDGTGGWKVRRDLLN CCCCCCHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA