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The map label for this gene is gntR [H]

Identifier: 158422732

GI number: 158422732

Start: 1237264

End: 1238067

Strand: Reverse

Name: gntR [H]

Synonym: AZC_1108

Alternate gene names: 158422732

Gene position: 1238067-1237264 (Counterclockwise)

Preceding gene: 158422738

Following gene: 158422731

Centisome position: 23.06

GC content: 74.0

Gene sequence:

>804_bases
ATGAGCCAGCACGCTGTGGACGCGGACAGGACGCAGGCGGACGCATCGGCCGATGCGCCCGGCGCCGTGCTCGCGCTCAG
CGAGACCAGCGACAGCCGCCTGCCCCTCTATCAGCGCCTGCGCGACGCCATCGTCGCCCGCATCGTCGCGGGCGACTGGG
GGCCGGGCACGGCCATTCCGGCGGAAAGCGAGATCGCCCGCGTCAACGGCGTGGCGCTCGGCACCGTGCGCAAGGCGCTC
GACACGCTGGTGGCCGAGGGCGTGCTCGACCGGGTGCAGGGGCGCGGCACCTTCGTGCGCCGCCCCTCCCTCGACCGCTC
GCTCTTCCGCTTCTTCCGCGCCGAGGGGGCGGACGGGGCGCGCGCCATGCCCGAGGGCCGCGTGCTCGCCCGCAAGGTCG
CCCCCTGCCCGGCGGAACCCGCGAGGGCGCTCGGCCTCGCGCCGAAGTCGCTCGCCTTGCGCATCGACCGCCTGCGCCTC
ATCGACGGCACCCCGGTCTTCGCCGAGGAAATCTGGCTGCCGCGCGCCCGCTTCGCGCCGCTGGAGGATCTCGTCCTCAC
CGGCTTCGGCGACCTGCTCTATCCGCTCTATGAGCGCCTGTGCGGCGAGGTGGTCGCCTCTGCCGAGGAGACGCTCACCA
TCGACCTCGCTACCGAGAAGGACGCCCGCGTGCTGGAGATCCCCGCCGGCGCGCCCGTGGTGGTGGTGGACCGTGTGGCG
CTCGGCTTCGATCGCCATCCCATCGAGTGGCGCCGCTCGCGCGGCCCCGCCGACCGCTTCCGCTACCGCATCGAGATCCG
CTGA

Upstream 100 bases:

>100_bases
CAATACGGCGCCTTCGCACCTGCACAGCTACCCGATTGACGGTGGGGATAGCCCCCTCTAGTCCTATAGAGGACCAATCA
ACCGGTGGAGCGCGGGTGGC

Downstream 100 bases:

>100_bases
GCGGTCCGCCGCTCATTTTCGTTCGCAACCGTTCACGCAAGGCGCCAGCCGGCCGCAAGAGCCGCGCGGGCCTGCCGGAG
GACACCCATGTTCAGTTGGT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSQHAVDADRTQADASADAPGAVLALSETSDSRLPLYQRLRDAIVARIVAGDWGPGTAIPAESEIARVNGVALGTVRKAL
DTLVAEGVLDRVQGRGTFVRRPSLDRSLFRFFRAEGADGARAMPEGRVLARKVAPCPAEPARALGLAPKSLALRIDRLRL
IDGTPVFAEEIWLPRARFAPLEDLVLTGFGDLLYPLYERLCGEVVASAEETLTIDLATEKDARVLEIPAGAPVVVVDRVA
LGFDRHPIEWRRSRGPADRFRYRIEIR

Sequences:

>Translated_267_residues
MSQHAVDADRTQADASADAPGAVLALSETSDSRLPLYQRLRDAIVARIVAGDWGPGTAIPAESEIARVNGVALGTVRKAL
DTLVAEGVLDRVQGRGTFVRRPSLDRSLFRFFRAEGADGARAMPEGRVLARKVAPCPAEPARALGLAPKSLALRIDRLRL
IDGTPVFAEEIWLPRARFAPLEDLVLTGFGDLLYPLYERLCGEVVASAEETLTIDLATEKDARVLEIPAGAPVVVVDRVA
LGFDRHPIEWRRSRGPADRFRYRIEIR
>Mature_266_residues
SQHAVDADRTQADASADAPGAVLALSETSDSRLPLYQRLRDAIVARIVAGDWGPGTAIPAESEIARVNGVALGTVRKALD
TLVAEGVLDRVQGRGTFVRRPSLDRSLFRFFRAEGADGARAMPEGRVLARKVAPCPAEPARALGLAPKSLALRIDRLRLI
DGTPVFAEEIWLPRARFAPLEDLVLTGFGDLLYPLYERLCGEVVASAEETLTIDLATEKDARVLEIPAGAPVVVVDRVAL
GFDRHPIEWRRSRGPADRFRYRIEIR

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082252, Length=220, Percent_Identity=27.2727272727273, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1786950, Length=231, Percent_Identity=27.2727272727273, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788418, Length=244, Percent_Identity=25.4098360655738, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790118, Length=205, Percent_Identity=25.3658536585366, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 29137; Mature: 29006

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHAVDADRTQADASADAPGAVLALSETSDSRLPLYQRLRDAIVARIVAGDWGPGTAIP
CCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AESEIARVNGVALGTVRKALDTLVAEGVLDRVQGRGTFVRRPSLDRSLFRFFRAEGADGA
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCC
RAMPEGRVLARKVAPCPAEPARALGLAPKSLALRIDRLRLIDGTPVFAEEIWLPRARFAP
CCCCCCHHHHHHCCCCCCCHHHHHCCCCHHHHHEEEEEEEECCCCHHHHHHCCCCCCCCC
LEDLVLTGFGDLLYPLYERLCGEVVASAEETLTIDLATEKDARVLEIPAGAPVVVVDRVA
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCEEEEEHHH
LGFDRHPIEWRRSRGPADRFRYRIEIR
HCCCCCCHHHHHCCCCHHHEEEEEEEC
>Mature Secondary Structure 
SQHAVDADRTQADASADAPGAVLALSETSDSRLPLYQRLRDAIVARIVAGDWGPGTAIP
CCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AESEIARVNGVALGTVRKALDTLVAEGVLDRVQGRGTFVRRPSLDRSLFRFFRAEGADGA
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCC
RAMPEGRVLARKVAPCPAEPARALGLAPKSLALRIDRLRLIDGTPVFAEEIWLPRARFAP
CCCCCCHHHHHHCCCCCCCHHHHHCCCCHHHHHEEEEEEEECCCCHHHHHHCCCCCCCCC
LEDLVLTGFGDLLYPLYERLCGEVVASAEETLTIDLATEKDARVLEIPAGAPVVVVDRVA
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCEEEEEHHH
LGFDRHPIEWRRSRGPADRFRYRIEIR
HCCCCCCHHHHHCCCCHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]