| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422729
Identifier: 158422729
GI number: 158422729
Start: 1233684
End: 1234994
Strand: Direct
Name: 158422729
Synonym: AZC_1105
Alternate gene names: NA
Gene position: 1233684-1234994 (Clockwise)
Preceding gene: 158422728
Following gene: 158422733
Centisome position: 22.97
GC content: 75.51
Gene sequence:
>1311_bases ATGGCGGATGCGGGCGCGGCGCGGACGTTCCTCTCGGGCCTCGACGAGGCGGGCGCCGAACGCCTGCTCACCGATTGGGA GATCTGGGCGCGCCCCGACCAGTTGCCGCCGCCCGCCGCGTCCGGTGGCCGGCCCTGGACCACCTGGCTGGTGCTGGGCG GGCGGGGCGCCGGCAAGACGCGGGCGGGTGCCGAATGGGTGCGTGGACTGGCCCTCGGCCGGCCGCCTTTCGCGCCGGCC CCCGTGGGCCGCATCGCGCTGGTGGCCGAGACCATGGGCGATCTGCGGGAGGTGATGGTGGAGGGTGTGTCCGGCCTGCT CGCCGTCCATCCCGCCGCCGAACGGCCCCGCTGGGAGCCCACCCGCCGCCGCCTCGTCTGGCCCAATGGCGCGGTGGCGC AGGGCTTTTCCGCCGAGGACCCCGAAAGCCTGCGCGGGCCGCAATTCGAGGCCGCCTGGCTCGATGAACTCGCCAAGTGG CGGCGGGCCGAGGCGGTGTTCGACATGCTCCAGTTCGGCCTCCGGCTCGGCGCGCAGCCGCGCCAGATGGTGACGACGAC GCCCCGCCCGAGCGCCCTGCTGCGCCGCCTCATGGCCGACCCGTCCACCGTCTTGAGCCGCGCAACCACGGCTCAGAACG CCTTTCACCTCGCGCCCGCTTTCCTCGACACGGTGCTGGCCCGCTATGGCGGCACGCGGCTCGGGCGGCAGGAACTGGAG GGCGAAATCATCGAGGACCGGCCCGACGCGCTCTGGACCCGTTCGGCCCTCGAGGCCGCCCGCGAGGCCGCGGCCCCGCC GCTCGCCCGCGTGGTGGTGGCCCTCGATCCGCCGGCCTCCTCGCGGGCCGGGGCGGACGCCTGCGGGATCATCGCCGCCG GCATCGACGGGGAGGGCCTTGTGCATGTCTTGGCGGACGCCACCGCCGCCGGCCTGCGCCCCGCCCAATGGGCGGCGCGG GCCATCGACCTGTGGCGCACCCATGAGGCGGATGCGGTGGTGGCGGAGGTGAACCAGGGCGGCGAGATGGTGCGCAGCGT GCTCGCCGAGGTGGATGCCAGCGTGCCGGTGGTGAGCGTGCGCGCAACGCGCGGCAAGTATCTGCGCGCCGAGCCCGTCG CCGCTCTCTATGAGCAGGGGCGCGTGCGCCACGCCGGTGCCTTCCCGGCGCTGGAGGACGAGATGTGTGACTTCGGCCCG GAGGGCCTGTCCTCCGGCCGTTCGCCGGACCGGCTCGACGCCCTCGTCTGGGCCGTCACCCAGCTCGCCCTCGGCCCCCG CGCCCCGGCGCCGCGCGTGCGGCGGTTTTGA
Upstream 100 bases:
>100_bases GGCGCCCGCCTGTGCCGCATTCGTTCGCCGGAGGCGCCTCATGTCGCTCGCCCTTCCCCCTCCCTCCGCCGCCGCTTTGC GTGCGGCCCTGGCGGCGGTG
Downstream 100 bases:
>100_bases AGGCGCTCCCGCGCCGTTTCAGGCGGCGGCCAAAAGCGCCCGGAAGCCGAACAGCCGGGCGGCGGTGCCGCCGAGAACCT GCGGCAGCTCGGGGGCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Large Terminase; Terminase Large Subunit; Large Terminase Phage Packaging Protein; Terminase-Like Family Protein; Phage Protein-Like
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MADAGAARTFLSGLDEAGAERLLTDWEIWARPDQLPPPAASGGRPWTTWLVLGGRGAGKTRAGAEWVRGLALGRPPFAPA PVGRIALVAETMGDLREVMVEGVSGLLAVHPAAERPRWEPTRRRLVWPNGAVAQGFSAEDPESLRGPQFEAAWLDELAKW RRAEAVFDMLQFGLRLGAQPRQMVTTTPRPSALLRRLMADPSTVLSRATTAQNAFHLAPAFLDTVLARYGGTRLGRQELE GEIIEDRPDALWTRSALEAAREAAAPPLARVVVALDPPASSRAGADACGIIAAGIDGEGLVHVLADATAAGLRPAQWAAR AIDLWRTHEADAVVAEVNQGGEMVRSVLAEVDASVPVVSVRATRGKYLRAEPVAALYEQGRVRHAGAFPALEDEMCDFGP EGLSSGRSPDRLDALVWAVTQLALGPRAPAPRVRRF
Sequences:
>Translated_436_residues MADAGAARTFLSGLDEAGAERLLTDWEIWARPDQLPPPAASGGRPWTTWLVLGGRGAGKTRAGAEWVRGLALGRPPFAPA PVGRIALVAETMGDLREVMVEGVSGLLAVHPAAERPRWEPTRRRLVWPNGAVAQGFSAEDPESLRGPQFEAAWLDELAKW RRAEAVFDMLQFGLRLGAQPRQMVTTTPRPSALLRRLMADPSTVLSRATTAQNAFHLAPAFLDTVLARYGGTRLGRQELE GEIIEDRPDALWTRSALEAAREAAAPPLARVVVALDPPASSRAGADACGIIAAGIDGEGLVHVLADATAAGLRPAQWAAR AIDLWRTHEADAVVAEVNQGGEMVRSVLAEVDASVPVVSVRATRGKYLRAEPVAALYEQGRVRHAGAFPALEDEMCDFGP EGLSSGRSPDRLDALVWAVTQLALGPRAPAPRVRRF >Mature_435_residues ADAGAARTFLSGLDEAGAERLLTDWEIWARPDQLPPPAASGGRPWTTWLVLGGRGAGKTRAGAEWVRGLALGRPPFAPAP VGRIALVAETMGDLREVMVEGVSGLLAVHPAAERPRWEPTRRRLVWPNGAVAQGFSAEDPESLRGPQFEAAWLDELAKWR RAEAVFDMLQFGLRLGAQPRQMVTTTPRPSALLRRLMADPSTVLSRATTAQNAFHLAPAFLDTVLARYGGTRLGRQELEG EIIEDRPDALWTRSALEAAREAAAPPLARVVVALDPPASSRAGADACGIIAAGIDGEGLVHVLADATAAGLRPAQWAARA IDLWRTHEADAVVAEVNQGGEMVRSVLAEVDASVPVVSVRATRGKYLRAEPVAALYEQGRVRHAGAFPALEDEMCDFGPE GLSSGRSPDRLDALVWAVTQLALGPRAPAPRVRRF
Specific function: Unknown
COG id: COG5323
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46656; Mature: 46524
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAGAARTFLSGLDEAGAERLLTDWEIWARPDQLPPPAASGGRPWTTWLVLGGRGAGKT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC RAGAEWVRGLALGRPPFAPAPVGRIALVAETMGDLREVMVEGVSGLLAVHPAAERPRWEP HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC TRRRLVWPNGAVAQGFSAEDPESLRGPQFEAAWLDELAKWRRAEAVFDMLQFGLRLGAQP HHCEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RQMVTTTPRPSALLRRLMADPSTVLSRATTAQNAFHLAPAFLDTVLARYGGTRLGRQELE CHHEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC GEIIEDRPDALWTRSALEAAREAAAPPLARVVVALDPPASSRAGADACGIIAAGIDGEGL CCHHCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCEEEEECCCCCCH VHVLADATAAGLRPAQWAARAIDLWRTHEADAVVAEVNQGGEMVRSVLAEVDASVPVVSV HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCEEEE RATRGKYLRAEPVAALYEQGRVRHAGAFPALEDEMCDFGPEGLSSGRSPDRLDALVWAVT ECCCCCCCCCCHHHHHHHCCCCEECCCCCCHHHHHHCCCCHHHCCCCCHHHHHHHHHHHH QLALGPRAPAPRVRRF HHHCCCCCCCCCCCCC >Mature Secondary Structure ADAGAARTFLSGLDEAGAERLLTDWEIWARPDQLPPPAASGGRPWTTWLVLGGRGAGKT CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC RAGAEWVRGLALGRPPFAPAPVGRIALVAETMGDLREVMVEGVSGLLAVHPAAERPRWEP HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC TRRRLVWPNGAVAQGFSAEDPESLRGPQFEAAWLDELAKWRRAEAVFDMLQFGLRLGAQP HHCEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RQMVTTTPRPSALLRRLMADPSTVLSRATTAQNAFHLAPAFLDTVLARYGGTRLGRQELE CHHEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC GEIIEDRPDALWTRSALEAAREAAAPPLARVVVALDPPASSRAGADACGIIAAGIDGEGL CCHHCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCEEEEECCCCCCH VHVLADATAAGLRPAQWAARAIDLWRTHEADAVVAEVNQGGEMVRSVLAEVDASVPVVSV HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCEEEE RATRGKYLRAEPVAALYEQGRVRHAGAFPALEDEMCDFGPEGLSSGRSPDRLDALVWAVT ECCCCCCCCCCHHHHHHHCCCCEECCCCCCHHHHHHCCCCHHHCCCCCHHHHHHHHHHHH QLALGPRAPAPRVRRF HHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA