| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422733
Identifier: 158422733
GI number: 158422733
Start: 1238332
End: 1239504
Strand: Direct
Name: 158422733
Synonym: AZC_1109
Alternate gene names: NA
Gene position: 1238332-1239504 (Clockwise)
Preceding gene: 158422729
Following gene: 158422734
Centisome position: 23.06
GC content: 72.29
Gene sequence:
>1173_bases ATGCTGTCGTCCGTCTTCCAGGCCCTGCGCCCGCGTCCCGCCGAGGCCAAGGCGAGCCGCACCGCCGCGCTGGTGGCGCT GCTCGCCACCGGCCGCGCCCGCTGGACGCCCCGCGATTATGCCGGGCTCGCCCGCGAGGGCTTTGCCCGCAATGCGGTGG CCTATCGCGCCGTTCGGCTGATCAGCGAGGCCGCCGCCAGCGTGCCGCTGCTCTTGATGGACGGCGACCGCGAGATCGAC GCCCATCCGCTGCTGGACCTCCTCGCACGGCCCCATCCGCGTGCGGCGAAGGCGGATTTCCTGGAGGCGCTGTGCGGCCA TCTGCTGGTGGCCGGCAATGCCTATGTGGAAGCGGTGGCGGTGGAGGGCGCCGTGCGCGAACTCCACGTGCTGCGGCCGG ATCGCGTGCGCATCGTGCCCGGCCCCGACGGCTGGCCGGAGGCGTTCGACTACACGCTGGAGGGCCGCACCCTGCGCATT CCGCAGGAGAGCATCGTGCCGGGCGCCGACGTGCCGCCGGTGCTGCACCTCGCCTTGTTCAATCCGCTGGATGATCTCTA CGGCTTCGCCCCGCTGGAGGCGGCGGCGCAGGCGCTCGATCTGCACAATGCCGCCGGCGCCTGGAACAAGGCGCTGCTCG ACAATGCCGCGCGCCCTTCCGGCGCGCTGGTCTATGGCGGCACGGGTTCGCTCTCCGAGGAACAGTTCGCGCGGCTCAGG GAAGAACTGGAGGCGAGCTTCCAGGGTGCCGCCAATGCCGGCCGCCCGCTGCTGCTGGAAGGCGGGCTCGACTGGAAGCC CCTCGGCCTCAGCCCGAAGGACATGGATTTCGCCGCCGCCCGCGAGGCCGCCGCGCGGGAGATCGCGCTGGCGCTCGGCG TGCCGCCCATGCTGCTTGGCATTCCGGGCGACAACACCTATGCCAATTATGCCGAGGCCAACCGCGTGCTTTGGCGCCAG AGCGTGCTGCCGCTGGTGAAGCGGGTTGCCGGTGCGCTGAGCGCCTGGCTCGCGCCGGCCTTCGGTTCGGGCCTCGCGCT CGTGCCCGACCTCGACCAGGTGGAGGCGCTCGCCGCCGAGCGCTCCGAGCTCTGGAGCCGCGTGAACGCGGCCGATTTCC TCACCGATGCGGAGAAGCGCGCGGCGGTCGGCTACGGCCCCGTCGCGCCCTGA
Upstream 100 bases:
>100_bases GAGGGCGCGGTGCGCTTTCACGCTTCAGACACGATCCTCCAGCGGCCGGTGGCCGTCGCCTGTCCTGCTTGCTCCGGCTG CGGAGCCGAGGGAGTCCCGC
Downstream 100 bases:
>100_bases GGGGAGGTCATCTTGGAGAGCATCCTTCAGGTTTTCGCCACGCGCGGCGACCTCGCCCATCTGGCGCTCGCCGCCTGGGC GCTGAGCGCGTCCGGCGTTG
Product: phage portal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MLSSVFQALRPRPAEAKASRTAALVALLATGRARWTPRDYAGLAREGFARNAVAYRAVRLISEAAASVPLLLMDGDREID AHPLLDLLARPHPRAAKADFLEALCGHLLVAGNAYVEAVAVEGAVRELHVLRPDRVRIVPGPDGWPEAFDYTLEGRTLRI PQESIVPGADVPPVLHLALFNPLDDLYGFAPLEAAAQALDLHNAAGAWNKALLDNAARPSGALVYGGTGSLSEEQFARLR EELEASFQGAANAGRPLLLEGGLDWKPLGLSPKDMDFAAAREAAAREIALALGVPPMLLGIPGDNTYANYAEANRVLWRQ SVLPLVKRVAGALSAWLAPAFGSGLALVPDLDQVEALAAERSELWSRVNAADFLTDAEKRAAVGYGPVAP
Sequences:
>Translated_390_residues MLSSVFQALRPRPAEAKASRTAALVALLATGRARWTPRDYAGLAREGFARNAVAYRAVRLISEAAASVPLLLMDGDREID AHPLLDLLARPHPRAAKADFLEALCGHLLVAGNAYVEAVAVEGAVRELHVLRPDRVRIVPGPDGWPEAFDYTLEGRTLRI PQESIVPGADVPPVLHLALFNPLDDLYGFAPLEAAAQALDLHNAAGAWNKALLDNAARPSGALVYGGTGSLSEEQFARLR EELEASFQGAANAGRPLLLEGGLDWKPLGLSPKDMDFAAAREAAAREIALALGVPPMLLGIPGDNTYANYAEANRVLWRQ SVLPLVKRVAGALSAWLAPAFGSGLALVPDLDQVEALAAERSELWSRVNAADFLTDAEKRAAVGYGPVAP >Mature_390_residues MLSSVFQALRPRPAEAKASRTAALVALLATGRARWTPRDYAGLAREGFARNAVAYRAVRLISEAAASVPLLLMDGDREID AHPLLDLLARPHPRAAKADFLEALCGHLLVAGNAYVEAVAVEGAVRELHVLRPDRVRIVPGPDGWPEAFDYTLEGRTLRI PQESIVPGADVPPVLHLALFNPLDDLYGFAPLEAAAQALDLHNAAGAWNKALLDNAARPSGALVYGGTGSLSEEQFARLR EELEASFQGAANAGRPLLLEGGLDWKPLGLSPKDMDFAAAREAAAREIALALGVPPMLLGIPGDNTYANYAEANRVLWRQ SVLPLVKRVAGALSAWLAPAFGSGLALVPDLDQVEALAAERSELWSRVNAADFLTDAEKRAAVGYGPVAP
Specific function: Unknown
COG id: COG4695
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phage portal family. HK97 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006944 - InterPro: IPR006427 [H]
Pfam domain/function: PF04860 Phage_portal [H]
EC number: NA
Molecular weight: Translated: 41491; Mature: 41491
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSVFQALRPRPAEAKASRTAALVALLATGRARWTPRDYAGLAREGFARNAVAYRAVRL CHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ISEAAASVPLLLMDGDREIDAHPLLDLLARPHPRAAKADFLEALCGHLLVAGNAYVEAVA HHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHH VEGAVRELHVLRPDRVRIVPGPDGWPEAFDYTLEGRTLRIPQESIVPGADVPPVLHLALF HHHHHHHHHEECCCCEEEECCCCCCHHHHCEEECCCEEECCHHHCCCCCCCCHHHHHHHH NPLDDLYGFAPLEAAAQALDLHNAAGAWNKALLDNAARPSGALVYGGTGSLSEEQFARLR CCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHH EELEASFQGAANAGRPLLLEGGLDWKPLGLSPKDMDFAAAREAAAREIALALGVPPMLLG HHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE IPGDNTYANYAEANRVLWRQSVLPLVKRVAGALSAWLAPAFGSGLALVPDLDQVEALAAE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHH RSELWSRVNAADFLTDAEKRAAVGYGPVAP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLSSVFQALRPRPAEAKASRTAALVALLATGRARWTPRDYAGLAREGFARNAVAYRAVRL CHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ISEAAASVPLLLMDGDREIDAHPLLDLLARPHPRAAKADFLEALCGHLLVAGNAYVEAVA HHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHH VEGAVRELHVLRPDRVRIVPGPDGWPEAFDYTLEGRTLRIPQESIVPGADVPPVLHLALF HHHHHHHHHEECCCCEEEECCCCCCHHHHCEEECCCEEECCHHHCCCCCCCCHHHHHHHH NPLDDLYGFAPLEAAAQALDLHNAAGAWNKALLDNAARPSGALVYGGTGSLSEEQFARLR CCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHH EELEASFQGAANAGRPLLLEGGLDWKPLGLSPKDMDFAAAREAAAREIALALGVPPMLLG HHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE IPGDNTYANYAEANRVLWRQSVLPLVKRVAGALSAWLAPAFGSGLALVPDLDQVEALAAE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHH RSELWSRVNAADFLTDAEKRAAVGYGPVAP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA