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The map label for this gene is marR [H]

Identifier: 158422699

GI number: 158422699

Start: 1201707

End: 1202213

Strand: Direct

Name: marR [H]

Synonym: AZC_1075

Alternate gene names: 158422699

Gene position: 1201707-1202213 (Clockwise)

Preceding gene: 158422698

Following gene: 158422700

Centisome position: 22.38

GC content: 70.61

Gene sequence:

>507_bases
GTGCTAATAGAAAGCATGACTTATAAATATTCCGCGCCCACGCTGCCGCCCGCGACCCAGTTCGGGCGCCTGGTCATTCA
GGTGCACCGGCTATGGCGGCGGGAACTGGACCATGCCCTGGTCGGCCACGGACTGAGCCTTGCGACCGCTCTGCCGCTGC
TCATGCTGCGCGAGCGCGGGGAACTGCGGCAGAACGCGCTGGCGGAGGCGCTCGGCATCGAGTGCCCCTCGCTTGTGCGC
CTGCTCGATGCGCTGGCCGCCGAAGGGCTGGTGGAGCGGCGGGAAGACCCGGCAGACCGCCGGGCCAAGGTGCTGCACCT
CACCCCGCTCGGGCAGCGCCGCGCGCAGGCGGCGGAGGATGCGCTTGTGGTCATGCGCGCGCGCCTGCTGGCGGACGTGT
CCGAGGAGGATCTCGCCCGCACGCTCCATGTGCTGCGCACCGTCGAGGGGCGCCTCGATCGTGAGGCGGAGACCCGTCGG
CCCGGAGCGGAGGGAGATGCCGCATGA

Upstream 100 bases:

>100_bases
TCGACATCATCAACGCGATCGCCATCGGCTTCATGGTGCGCTGAGCGCATCGGGGTCGGGGCGGCGCCCCGCAGGGATTG
GTTGCATCGTAATAATTAGG

Downstream 100 bases:

>100_bases
TCGCGCTGCTGGCCAGCCTGCGCCCACGGGCGACGGACTGGATCTTCTCGCTGAAGACCTTCGCCGCCGCCATGACGGCG
CTCTTCATCGCGCTGTCCTG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLIESMTYKYSAPTLPPATQFGRLVIQVHRLWRRELDHALVGHGLSLATALPLLMLRERGELRQNALAEALGIECPSLVR
LLDALAAEGLVERREDPADRRAKVLHLTPLGQRRAQAAEDALVVMRARLLADVSEEDLARTLHVLRTVEGRLDREAETRR
PGAEGDAA

Sequences:

>Translated_168_residues
MLIESMTYKYSAPTLPPATQFGRLVIQVHRLWRRELDHALVGHGLSLATALPLLMLRERGELRQNALAEALGIECPSLVR
LLDALAAEGLVERREDPADRRAKVLHLTPLGQRRAQAAEDALVVMRARLLADVSEEDLARTLHVLRTVEGRLDREAETRR
PGAEGDAA
>Mature_168_residues
MLIESMTYKYSAPTLPPATQFGRLVIQVHRLWRRELDHALVGHGLSLATALPLLMLRERGELRQNALAEALGIECPSLVR
LLDALAAEGLVERREDPADRRAKVLHLTPLGQRRAQAAEDALVVMRARLLADVSEEDLARTLHVLRTVEGRLDREAETRR
PGAEGDAA

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18663; Mature: 18663

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIESMTYKYSAPTLPPATQFGRLVIQVHRLWRRELDHALVGHGLSLATALPLLMLRERG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ELRQNALAEALGIECPSLVRLLDALAAEGLVERREDPADRRAKVLHLTPLGQRRAQAAED
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCHHHHHHHHH
ALVVMRARLLADVSEEDLARTLHVLRTVEGRLDREAETRRPGAEGDAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MLIESMTYKYSAPTLPPATQFGRLVIQVHRLWRRELDHALVGHGLSLATALPLLMLRERG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ELRQNALAEALGIECPSLVRLLDALAAEGLVERREDPADRRAKVLHLTPLGQRRAQAAED
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCHHHHHHHHH
ALVVMRARLLADVSEEDLARTLHVLRTVEGRLDREAETRRPGAEGDAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA