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The map label for this gene is ychE [C]

Identifier: 158422692

GI number: 158422692

Start: 1196358

End: 1196987

Strand: Reverse

Name: ychE [C]

Synonym: AZC_1068

Alternate gene names: 158422692

Gene position: 1196987-1196358 (Counterclockwise)

Preceding gene: 158422694

Following gene: 158422684

Centisome position: 22.29

GC content: 64.76

Gene sequence:

>630_bases
ATGCTGGAAGACTACGACCTCTTCATCACCCAGTTCGTGACGCTCTATGCCCTCCTGGAGCCCATCGGCCACCTGTCGCT
CTTCCTCGCCCTCACCGGCGAGCACAGCAAGGCGGACCGCCTCCGGCTCGCCATTCTGAGCCCGCTGTTCGCCTTCGCCG
TCTTGTCCTTCTTCGCCTTGGCGGGGCAGACGCTGCTGAATGCGATGAACGTCTCGATCCTGTCTTTCCAGATCGCCGGC
GGCATCATCCTCTTCAGCTTCTCCCTGTCGATGATCTTCGGCGAGGCGAAGAAGCCGAGCGGCGTGCCCGAGGAGAAGAA
CCTGATCTCGCAGGCCATCTATCCCCTGGCGACGCCCACCATCGCAGGGCCCGGCGCCATCCTGTCCGTGGTCCTGCTGG
CGGACAACAATCGCGGCAGCCTCATCGCCCAGAGCATGACCGTTCTGGCGGTGGCGAGCATGATGCTGCTGCTGATGGGC
GCCTTCCTCGCGGGCGACATCATCACCCGCCTCATCGGCAGCGGCGGGACGAACCTCGTCCGCCGGGTGATGGGCATCCT
CATCGCCGCGCTGTCGGTAGATCTGGTGCTGAGCGCGCTGGCCAAATGGCTGCACCTGCCGCCCATCTGA

Upstream 100 bases:

>100_bases
GGTCCCGTACTGAACCATGACCAGGCCTGAGCTTTGCCGTCGTTCAAGGTTTTGTGATCCGCCCGAGGGGCGTCTGACGG
AGGGGCGGGAGCGCCGGACC

Downstream 100 bases:

>100_bases
GCGGAAGCGTCAGCTGGCGGTCCAGCGGTTGCGGACATAGGCGGCGGCGAACGGCATCACGTCGGCGGTCAGGTCCGCCT
CATGGCGCACCACGCGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MLEDYDLFITQFVTLYALLEPIGHLSLFLALTGEHSKADRLRLAILSPLFAFAVLSFFALAGQTLLNAMNVSILSFQIAG
GIILFSFSLSMIFGEAKKPSGVPEEKNLISQAIYPLATPTIAGPGAILSVVLLADNNRGSLIAQSMTVLAVASMMLLLMG
AFLAGDIITRLIGSGGTNLVRRVMGILIAALSVDLVLSALAKWLHLPPI

Sequences:

>Translated_209_residues
MLEDYDLFITQFVTLYALLEPIGHLSLFLALTGEHSKADRLRLAILSPLFAFAVLSFFALAGQTLLNAMNVSILSFQIAG
GIILFSFSLSMIFGEAKKPSGVPEEKNLISQAIYPLATPTIAGPGAILSVVLLADNNRGSLIAQSMTVLAVASMMLLLMG
AFLAGDIITRLIGSGGTNLVRRVMGILIAALSVDLVLSALAKWLHLPPI
>Mature_209_residues
MLEDYDLFITQFVTLYALLEPIGHLSLFLALTGEHSKADRLRLAILSPLFAFAVLSFFALAGQTLLNAMNVSILSFQIAG
GIILFSFSLSMIFGEAKKPSGVPEEKNLISQAIYPLATPTIAGPGAILSVVLLADNNRGSLIAQSMTVLAVASMMLLLMG
AFLAGDIITRLIGSGGTNLVRRVMGILIAALSVDLVLSALAKWLHLPPI

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=201, Percent_Identity=28.8557213930348, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=28.3505154639175, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1789842, Length=205, Percent_Identity=28.780487804878, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22197; Mature: 22197

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEDYDLFITQFVTLYALLEPIGHLSLFLALTGEHSKADRLRLAILSPLFAFAVLSFFAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGQTLLNAMNVSILSFQIAGGIILFSFSLSMIFGEAKKPSGVPEEKNLISQAIYPLATPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
IAGPGAILSVVLLADNNRGSLIAQSMTVLAVASMMLLLMGAFLAGDIITRLIGSGGTNLV
CCCCHHHHEEHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RRVMGILIAALSVDLVLSALAKWLHLPPI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLEDYDLFITQFVTLYALLEPIGHLSLFLALTGEHSKADRLRLAILSPLFAFAVLSFFAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGQTLLNAMNVSILSFQIAGGIILFSFSLSMIFGEAKKPSGVPEEKNLISQAIYPLATPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
IAGPGAILSVVLLADNNRGSLIAQSMTVLAVASMMLLLMGAFLAGDIITRLIGSGGTNLV
CCCCHHHHEEHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RRVMGILIAALSVDLVLSALAKWLHLPPI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]