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The map label for this gene is yddE [C]

Identifier: 158422689

GI number: 158422689

Start: 1193429

End: 1194322

Strand: Direct

Name: yddE [C]

Synonym: AZC_1065

Alternate gene names: 158422689

Gene position: 1193429-1194322 (Clockwise)

Preceding gene: 158422688

Following gene: 158422690

Centisome position: 22.22

GC content: 69.35

Gene sequence:

>894_bases
ATGTCGCGCCGCTATCTCATCCTCGACGTCTTCACCGACCGCGCCCTTGGCGGCAACCCGCTGGCGGTGGTGCTGAATTC
GGACGGGCTGGACGAGGCGTCCATGCAGCACATCACCCGCGAGTTCAACCTCTCGGAGACGGTGTTCATCCTGCCGCCCA
AGGATCCGGCGAACCGCGCCCGCATCCGCATCTTCACCACCGCCCACGAACTCCCCTTCGCTGGCCATCCCACCGTCGGC
GCCTCCATCGCGCTGGCGCTGGAAGGCGGCTCAGCCGGGGCCATGGCGCTCGAGGAGGCGATCGGCATCGTGAAGTGCGA
GGTGGCGACCGATGGCACCGGCAGCCGCCGCGGCACCTCCACCTTCGTGGTGCCGCGCGCCAGCACGCTGGAAGAGACGG
AAGTGTCGAAGCGCGAGTGCGCCGATGCCCTGTCGCTGGAAGTGGCGGACATCGGCTTCGACGCGCATCGACCGGTGGTG
GCGACCGCCGGCGTGCCCTTCCTCTTCGTGCCGGTGGCCAACCTCACCGCGCTTGCCCGCGCGCGGCCGGACGAGAGCGC
CTTCATCCGCAATCTCGGCGCCTATGGCGAGGCCATGTATCTCTACACGCTGGACGATGAGGGCGACGCGGATTTCCGCT
CCCGCATGTTCTCGCCCGGCATCGGCTCGCTCGAAGATCCCGCCACCGGTGCCGCCGCCGCTGCCTTCCCTTCGGTGCTC
ATGGATGCGGAGGCACGCGTGGACGGCCACCATCGTGTCCGCATCGACCAGGGCGTGGAGATGGGGCGCCCCAGCCGCAT
CAATCTCGCCTTCACGGTGAAGGGCGGCGCGGTGGCCCAGGCGACCATCGGCGGCTCGGCCATCGTCATCGCCGAGGGCA
CGCTGCACGTCTGA

Upstream 100 bases:

>100_bases
CGCAGGACGAGTTCGTACGCCCAAGTCACGTCTTCACGGCCGAGGCGATTTAAGGTCAAGATTGCCGCGCCCACCGCCTG
CAACCGACGGACACCCGCCC

Downstream 100 bases:

>100_bases
TCCTGCCGCAAGGACAGGGGTTTGGGGCACGCCGCCGTTTCCCGGCGCGCAACGGGCCTGTGCCGTGAAGGCACAGCTTT
TCTGGGGGCGCTACCCTTGG

Product: phenazine biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSRRYLILDVFTDRALGGNPLAVVLNSDGLDEASMQHITREFNLSETVFILPPKDPANRARIRIFTTAHELPFAGHPTVG
ASIALALEGGSAGAMALEEAIGIVKCEVATDGTGSRRGTSTFVVPRASTLEETEVSKRECADALSLEVADIGFDAHRPVV
ATAGVPFLFVPVANLTALARARPDESAFIRNLGAYGEAMYLYTLDDEGDADFRSRMFSPGIGSLEDPATGAAAAAFPSVL
MDAEARVDGHHRVRIDQGVEMGRPSRINLAFTVKGGAVAQATIGGSAIVIAEGTLHV

Sequences:

>Translated_297_residues
MSRRYLILDVFTDRALGGNPLAVVLNSDGLDEASMQHITREFNLSETVFILPPKDPANRARIRIFTTAHELPFAGHPTVG
ASIALALEGGSAGAMALEEAIGIVKCEVATDGTGSRRGTSTFVVPRASTLEETEVSKRECADALSLEVADIGFDAHRPVV
ATAGVPFLFVPVANLTALARARPDESAFIRNLGAYGEAMYLYTLDDEGDADFRSRMFSPGIGSLEDPATGAAAAAFPSVL
MDAEARVDGHHRVRIDQGVEMGRPSRINLAFTVKGGAVAQATIGGSAIVIAEGTLHV
>Mature_296_residues
SRRYLILDVFTDRALGGNPLAVVLNSDGLDEASMQHITREFNLSETVFILPPKDPANRARIRIFTTAHELPFAGHPTVGA
SIALALEGGSAGAMALEEAIGIVKCEVATDGTGSRRGTSTFVVPRASTLEETEVSKRECADALSLEVADIGFDAHRPVVA
TAGVPFLFVPVANLTALARARPDESAFIRNLGAYGEAMYLYTLDDEGDADFRSRMFSPGIGSLEDPATGAAAAAFPSVLM
DAEARVDGHHRVRIDQGVEMGRPSRINLAFTVKGGAVAQATIGGSAIVIAEGTLHV

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=302, Percent_Identity=28.8079470198675, Blast_Score=91, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6321818, Length=299, Percent_Identity=24.4147157190635, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 31291; Mature: 31160

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRYLILDVFTDRALGGNPLAVVLNSDGLDEASMQHITREFNLSETVFILPPKDPANRA
CCCEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCE
RIRIFTTAHELPFAGHPTVGASIALALEGGSAGAMALEEAIGIVKCEVATDGTGSRRGTS
EEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCEEEEEEECCCCCCCCCCE
TFVVPRASTLEETEVSKRECADALSLEVADIGFDAHRPVVATAGVPFLFVPVANLTALAR
EEEEECCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCEEEECCCCEEEEEHHHHHHHHH
ARPDESAFIRNLGAYGEAMYLYTLDDEGDADFRSRMFSPGIGSLEDPATGAAAAAFPSVL
CCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
MDAEARVDGHHRVRIDQGVEMGRPSRINLAFTVKGGAVAQATIGGSAIVIAEGTLHV
HCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEECCEECC
>Mature Secondary Structure 
SRRYLILDVFTDRALGGNPLAVVLNSDGLDEASMQHITREFNLSETVFILPPKDPANRA
CCEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCE
RIRIFTTAHELPFAGHPTVGASIALALEGGSAGAMALEEAIGIVKCEVATDGTGSRRGTS
EEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCEEEEEEECCCCCCCCCCE
TFVVPRASTLEETEVSKRECADALSLEVADIGFDAHRPVVATAGVPFLFVPVANLTALAR
EEEEECCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCEEEECCCCEEEEEHHHHHHHHH
ARPDESAFIRNLGAYGEAMYLYTLDDEGDADFRSRMFSPGIGSLEDPATGAAAAAFPSVL
CCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
MDAEARVDGHHRVRIDQGVEMGRPSRINLAFTVKGGAVAQATIGGSAIVIAEGTLHV
HCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]