| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422672
Identifier: 158422672
GI number: 158422672
Start: 1177251
End: 1178123
Strand: Reverse
Name: 158422672
Synonym: AZC_1048
Alternate gene names: NA
Gene position: 1178123-1177251 (Counterclockwise)
Preceding gene: 158422673
Following gene: 158422665
Centisome position: 21.94
GC content: 71.25
Gene sequence:
>873_bases TTGCTCCGCCCTGTCCCGTCCGGCCGCCGATCGCGGCGCCCGCGGGAAAGCGCCGGGCCGTTTTATGGGAGCCCCCCTCC CATGAGCGGTGAGCACACGGCACCGGAGCCCGCCGCGCCGCCGGATCCGCCGGGAAGCTTCGAGGCGCTGGACTGGCAGG GACGCCCCGTGCGCTGCGAGGATTGCCCGCACGAGGACATTCAGGCCATCGGCCGCTGCGATCTCGGCAAGGTCTGCGTG GCCGACCGGCGTACCCGTCGGATCGACCGCTTCTTCGCCCGCAATCCGGAACTGGCGGCGCGTTATCTGACCCATCCCTA CTCCGAGGTACGGCTGCTCGCCGCCAAGCATGCCAGCGTGTTCCTGCTGCCGCCGCTGAAGGCGGACACGGAACCGGACG TGCGGGTGATGGTGGCCTACCGCCTGCCGCTCGCCCGCATCACCGACATGCGCGACGATCCGGATCCGCGTGTGCGCATG GCGGTTGCGCACCGGCTGGAGGGCCGGATGCTGGTCGCCATGCTGGGGGATGCGGATTATCGGGTGCGGGTGGTGGCGGC CCGGCGGGCGCCGCCGGAATCGCTCATCATGGCGCTCTATGATCCCGACATCGAGGTCCGGCGCGAAGTCGCCCGGCGCG TGCCGCTCCCCAATCTCGTCACCATGGCAGCGGATGCGGACCCTCTGGTGCGCGTCACGGTGGCCGAACGGCTGCCGCCC GAGCGGCTCACCGTGCTGATGCGCGATGCCGACATGCGCGTGCGCTTCGCCGTCGCCGAGCGGCTGCCGCTGGCCCATCT CGCAGGCATGGCAGAGGACGAGGTGGCGGCCATCCGGGATCTGGCACTGGCGCGGCTGAATGCCCCCACTTGA
Upstream 100 bases:
>100_bases GAAGGCCGCGCGCCTCCTCAACCTCACGCCGCGCCAGGTGGGTTATGCGCTGCGCAAATATGACATCGACATCAAGCGCT TCTGAACCACGGGGCGGAGC
Downstream 100 bases:
>100_bases GGCGACACCGGGACCGGCGACCTCCGACGGACACGAACGGTGAAACCGGGCCTGCCGGCGCGTTCGCCGCCAGGTCGAAC GACGACAGCATGGCCCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MLRPVPSGRRSRRPRESAGPFYGSPPPMSGEHTAPEPAAPPDPPGSFEALDWQGRPVRCEDCPHEDIQAIGRCDLGKVCV ADRRTRRIDRFFARNPELAARYLTHPYSEVRLLAAKHASVFLLPPLKADTEPDVRVMVAYRLPLARITDMRDDPDPRVRM AVAHRLEGRMLVAMLGDADYRVRVVAARRAPPESLIMALYDPDIEVRREVARRVPLPNLVTMAADADPLVRVTVAERLPP ERLTVLMRDADMRVRFAVAERLPLAHLAGMAEDEVAAIRDLALARLNAPT
Sequences:
>Translated_290_residues MLRPVPSGRRSRRPRESAGPFYGSPPPMSGEHTAPEPAAPPDPPGSFEALDWQGRPVRCEDCPHEDIQAIGRCDLGKVCV ADRRTRRIDRFFARNPELAARYLTHPYSEVRLLAAKHASVFLLPPLKADTEPDVRVMVAYRLPLARITDMRDDPDPRVRM AVAHRLEGRMLVAMLGDADYRVRVVAARRAPPESLIMALYDPDIEVRREVARRVPLPNLVTMAADADPLVRVTVAERLPP ERLTVLMRDADMRVRFAVAERLPLAHLAGMAEDEVAAIRDLALARLNAPT >Mature_290_residues MLRPVPSGRRSRRPRESAGPFYGSPPPMSGEHTAPEPAAPPDPPGSFEALDWQGRPVRCEDCPHEDIQAIGRCDLGKVCV ADRRTRRIDRFFARNPELAARYLTHPYSEVRLLAAKHASVFLLPPLKADTEPDVRVMVAYRLPLARITDMRDDPDPRVRM AVAHRLEGRMLVAMLGDADYRVRVVAARRAPPESLIMALYDPDIEVRREVARRVPLPNLVTMAADADPLVRVTVAERLPP ERLTVLMRDADMRVRFAVAERLPLAHLAGMAEDEVAAIRDLALARLNAPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR004830 - InterPro: IPR008665 [H]
Pfam domain/function: PF01816 LRV; PF05484 LRV_FeS [H]
EC number: NA
Molecular weight: Translated: 32411; Mature: 32411
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPVPSGRRSRRPRESAGPFYGSPPPMSGEHTAPEPAAPPDPPGSFEALDWQGRPVRCE CCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC DCPHEDIQAIGRCDLGKVCVADRRTRRIDRFFARNPELAARYLTHPYSEVRLLAAKHASV CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHEECCCCE FLLPPLKADTEPDVRVMVAYRLPLARITDMRDDPDPRVRMAVAHRLEGRMLVAMLGDADY EEECCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCE RVRVVAARRAPPESLIMALYDPDIEVRREVARRVPLPNLVTMAADADPLVRVTVAERLPP EEEEEEECCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEHHHCCH ERLTVLMRDADMRVRFAVAERLPLAHLAGMAEDEVAAIRDLALARLNAPT HHEEEEEECCCCEEEEEHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLRPVPSGRRSRRPRESAGPFYGSPPPMSGEHTAPEPAAPPDPPGSFEALDWQGRPVRCE CCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC DCPHEDIQAIGRCDLGKVCVADRRTRRIDRFFARNPELAARYLTHPYSEVRLLAAKHASV CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHEECCCCE FLLPPLKADTEPDVRVMVAYRLPLARITDMRDDPDPRVRMAVAHRLEGRMLVAMLGDADY EEECCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCE RVRVVAARRAPPESLIMALYDPDIEVRREVARRVPLPNLVTMAADADPLVRVTVAERLPP EEEEEEECCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEHHHCCH ERLTVLMRDADMRVRFAVAERLPLAHLAGMAEDEVAAIRDLALARLNAPT HHEEEEEECCCCEEEEEHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2836706 [H]