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The map label for this gene is 158422629

Identifier: 158422629

GI number: 158422629

Start: 1125589

End: 1126617

Strand: Direct

Name: 158422629

Synonym: AZC_1005

Alternate gene names: NA

Gene position: 1125589-1126617 (Clockwise)

Preceding gene: 158422628

Following gene: 158422630

Centisome position: 20.96

GC content: 68.12

Gene sequence:

>1029_bases
GTGGGTGACGCTCGGCCGCTCGGGTCGGGTGCGGGCTCTATGTGGCAGATCGCGATCATGGCACTGCGGGCAAGCTGGAA
GGGGTTTTTGACCGTCGGGGCGCTGAGTTGCCACGTGGGTCTCTATGCGGCCGCGTCCACCTCCGAGCGCATCTCGCTGC
ATATGGTCAACCGCAAGACGGGGCACCGGCTGCGGCGGCAATATGTGGATGAGGAGACGGGAGAGCCGGTCGAGGCCGAC
GCGCAGGTGAAGGGCTACGAGGTCTCAAAGGGCGAGTTCGTGACCGTCGAGCCTGACGAGATCGCCGACATCGTGCCCGC
CGGCACAAAGACCATTGCAGTCAATACCTTCCTCGCCTGCACGGACGTGGACACCGCATATTTCGACCGACCCTATTTCC
TCGCGCCGGTGGATGAGCCGAGCGCGGAGGTGCTGAAACTGCTCGCCGCGGGCATGAGCGAACGCAAGGTGGCGGCGCTC
GGGGAGGCGGTGCTGTTCCGGCGGGTGCGGCGGCTGCTCATCCGCCCGGTGGCGGAAGGTGGCGCGCTCACCGCCTGTAC
GCTCAATTTCGATTACGAGGTCCGCTCCGCGCAGGAGCAGTTCGCCGATGTGCCGAAGACGCGCATCTCCGGCGAAATGC
TGGAGCTCGCCACGCACATCATCCGCTCCAAGCCGGGCAAGTTCGACCCGTCCGCCATCGAGGATCGCTACGAGGACGCG
CTGGCGGCGCTTGTGCGCGCCAAGATGGAGGGCAAGCCGCTGCCCAAGCCCGAGCCGCGGCGCGAGGAGAAGGTGGTGAG
CCTGCTCGATGCCCTGCGCGCCAGCGCGGGGTCTCCGGACAAGCCGGCGCCCAAGCGGGCGGGTGCCAAGGGCAAGGCCG
CCGGTACGAAGACGGCTGGGTCCAAGGCGGGTAGCGCCAAGGCGGGTGGGTCCAAGGCAACTGGGACCAAGACCCGCAAG
GCAAAGAGTGCTGCGGCATCCGCCGGCGCGCAGACGCGGCGTACCGGCACCACCCGCAAGGCGGGGTGA

Upstream 100 bases:

>100_bases
CAGGCCCGGCTGGGCCGGCTGTTGCCGACGGTGAGCTGGGACCGATAGCCAACTGCGGCGTGCGGCGTCGGGAACGTCGC
GCTATGCTGGTCGTTATCGC

Downstream 100 bases:

>100_bases
GACAAGGCGGAGCAGAAGATGGGCCTCAGCACCTATCGCGCCAAGCGCGACTTCACCGTGACTCCCGAGCCCGACGGCGG
CGCGAAAGGCAAGGCCCGCG

Product: ATP-dependent DNA ligase Ku

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MGDARPLGSGAGSMWQIAIMALRASWKGFLTVGALSCHVGLYAAASTSERISLHMVNRKTGHRLRRQYVDEETGEPVEAD
AQVKGYEVSKGEFVTVEPDEIADIVPAGTKTIAVNTFLACTDVDTAYFDRPYFLAPVDEPSAEVLKLLAAGMSERKVAAL
GEAVLFRRVRRLLIRPVAEGGALTACTLNFDYEVRSAQEQFADVPKTRISGEMLELATHIIRSKPGKFDPSAIEDRYEDA
LAALVRAKMEGKPLPKPEPRREEKVVSLLDALRASAGSPDKPAPKRAGAKGKAAGTKTAGSKAGSAKAGGSKATGTKTRK
AKSAAASAGAQTRRTGTTRKAG

Sequences:

>Translated_342_residues
MGDARPLGSGAGSMWQIAIMALRASWKGFLTVGALSCHVGLYAAASTSERISLHMVNRKTGHRLRRQYVDEETGEPVEAD
AQVKGYEVSKGEFVTVEPDEIADIVPAGTKTIAVNTFLACTDVDTAYFDRPYFLAPVDEPSAEVLKLLAAGMSERKVAAL
GEAVLFRRVRRLLIRPVAEGGALTACTLNFDYEVRSAQEQFADVPKTRISGEMLELATHIIRSKPGKFDPSAIEDRYEDA
LAALVRAKMEGKPLPKPEPRREEKVVSLLDALRASAGSPDKPAPKRAGAKGKAAGTKTAGSKAGSAKAGGSKATGTKTRK
AKSAAASAGAQTRRTGTTRKAG
>Mature_341_residues
GDARPLGSGAGSMWQIAIMALRASWKGFLTVGALSCHVGLYAAASTSERISLHMVNRKTGHRLRRQYVDEETGEPVEADA
QVKGYEVSKGEFVTVEPDEIADIVPAGTKTIAVNTFLACTDVDTAYFDRPYFLAPVDEPSAEVLKLLAAGMSERKVAALG
EAVLFRRVRRLLIRPVAEGGALTACTLNFDYEVRSAQEQFADVPKTRISGEMLELATHIIRSKPGKFDPSAIEDRYEDAL
AALVRAKMEGKPLPKPEPRREEKVVSLLDALRASAGSPDKPAPKRAGAKGKAAGTKTAGSKAGSAKAGGSKATGTKTRKA
KSAAASAGAQTRRTGTTRKAG

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 36298; Mature: 36167

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDARPLGSGAGSMWQIAIMALRASWKGFLTVGALSCHVGLYAAASTSERISLHMVNRKT
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEHHHHHHHHHHEEECCCCCCEEEEEECCHH
GHRLRRQYVDEETGEPVEADAQVKGYEVSKGEFVTVEPDEIADIVPAGTKTIAVNTFLAC
HHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEECHHHHHHHCCCCCCEEEEEEEEEE
TDVDTAYFDRPYFLAPVDEPSAEVLKLLAAGMSERKVAALGEAVLFRRVRRLLIRPVAEG
ECCCHHHCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GALTACTLNFDYEVRSAQEQFADVPKTRISGEMLELATHIIRSKPGKFDPSAIEDRYEDA
CCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LAALVRAKMEGKPLPKPEPRREEKVVSLLDALRASAGSPDKPAPKRAGAKGKAAGTKTAG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCC
SKAGSAKAGGSKATGTKTRKAKSAAASAGAQTRRTGTTRKAG
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCC
>Mature Secondary Structure 
GDARPLGSGAGSMWQIAIMALRASWKGFLTVGALSCHVGLYAAASTSERISLHMVNRKT
CCCCCCCCCCCHHHHHHHHHHHHCCCHHEEHHHHHHHHHHEEECCCCCCEEEEEECCHH
GHRLRRQYVDEETGEPVEADAQVKGYEVSKGEFVTVEPDEIADIVPAGTKTIAVNTFLAC
HHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEECHHHHHHHCCCCCCEEEEEEEEEE
TDVDTAYFDRPYFLAPVDEPSAEVLKLLAAGMSERKVAALGEAVLFRRVRRLLIRPVAEG
ECCCHHHCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GALTACTLNFDYEVRSAQEQFADVPKTRISGEMLELATHIIRSKPGKFDPSAIEDRYEDA
CCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LAALVRAKMEGKPLPKPEPRREEKVVSLLDALRASAGSPDKPAPKRAGAKGKAAGTKTAG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCC
SKAGSAKAGGSKATGTKTRKAKSAAASAGAQTRRTGTTRKAG
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA