| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158422610
Identifier: 158422610
GI number: 158422610
Start: 1101306
End: 1104062
Strand: Direct
Name: 158422610
Synonym: AZC_0986
Alternate gene names: NA
Gene position: 1101306-1104062 (Clockwise)
Preceding gene: 158422609
Following gene: 158422618
Centisome position: 20.51
GC content: 68.84
Gene sequence:
>2757_bases TTGCACCGCCTTTTCGGCGCCGACGCCTTACAACAAGCGTTGGCGCAACATGCGATGAGGTGGCGAATGTCGGGCCGGCT GGTCTTCCTGCTGCGTGTGGCGATTGGCGTGGTCGCGCTGTCCGCCGGTGGTGCGGCGCTGGCGCAGACGGCGGGCGGGA CAACGCAGGCCATGAAGGGCTGCGAGCGCCTGCTGGCTGAAGGCAAGGTGCAGGAGGGCTATCCCTGCCTGCGCGACGTG CTGAAGACCATCGCCGCCGGCTCCGATGATGCCCGCACGCTGCAGGAATATCGCACCTGGGCCGAGGCCTTCCTCCAGGC CCGCCAACCGCGCCTTGCGGCCGCGCTCTATGAAGACGCGCTGGCCAGCCGCGCCGCGTCGGGCAAGCCGCTGGCCGATC TCGGGCGCATCCACTTCGCCTATTCCTATTATGTCCTGAGCCGGGGTCCGGACAAGGACAAGGCCATCGCCCACGCCCGC GCCGGCCTCGACATTCTGGAAAAGACCCTAGGCCCCGGCGCCTATGACACGGTGGCGGCGCGCGACAATCTCGCGGTGCT GTTGTCGGACAGCGGCGCCATCGCGCCCGGCCTTAATCTCGCCGAGAGCAATTTCGATATCGCACTGAAATCCCTGGGCG AGGACGAGCCGCTCACGTGGCGCGTCTCGAACAACTTCGCGGAGGCGCTGCGCTCCATCGGCCGGCCCGAGGCCGCCGTT CCCATCGATCAGGTGCTGCTCGCCAAGCGCGTGAAGCATTATGGCGAGGGCAGCATTCAGGCGCTGGTGAGCGCCAGCAA TCTGGCGCTCAGCTATCTGGAGATGGGCGACAAGGCGCAGGCCATGCGCTACTTCCGCCTGCAGGGCCGCTTCGGCGCGA AGCTGGCGGACCCCACCTCCGAGCACGAGGCGCAAGCCAAGGCCTGGTACACCTACACGGACATCTTCTTCTCGCCCGAT CCGCAACTGAAGCCCGACATGCTCGAAGCCCTCATGGGCCTCAAGGATTGGCGAAGCGCGCCGGACCTGATGCGGGTCAA GGCCTCCGAGCTGGCCGCCAAGGAGTATGAGCGGCAGGGCAAGGTGCGGCAGGGGCTGGCCCTGCGGCAGGCGGCCTATG AGATTTCCGCCTCGAGCTTCTCCGCCCGCAGCCCCATCACCTTCGATGCGCTGCTGGGGCTCGCCCGCGCCCATGTGCGC AATCAGGAGCCGGAGAAGGCGCTCGCCACCTTCCGCGATCTCGATCGCCAGCTCTATGACTGGACCCTGCGCGAGGTAGG CACGGCGGGTAACCGCTTCATCGCCGAAACCACGCGCGTGCTGGCGGACAATTTCCTCTATGAATTCGGCCGCTTCGCGC TGGAAGAGCCGTCCGCCCGCCCGGCTTTCGCGGATGCGGCGGGTCGCTGGAAGGCGCTGGAAAGCGGCCAGCGGGCGCGG CTACGGCAGATGGTCGACACTCTGCCCGACGACGTGAAGCCGCTGGCGCAGGAGGTCATCCGGCTTCTTGGCCGCCAGCA GGAGGTGCTCTCGGAGCGCCGCACGGCCGCCGAGCGCCGGGACGAAGAGGCGCTGGTTCAGGATGTGCAGAAGAAGAGCG GGGAACTGTCGGTACGTCTCGCCGCGCTCAAGCTGCCCGAACCGCCGCCGCTGGACGCGGCGATCGCCGGCGCGCTCGGT CCGAAGGACGCGCTGGTGAACTTCGTTCTGATCACCCGCCGTCAGGGCACCCGCAGCAGTGATGCGGCCATCGAGGACCA GCGCTTGCTCGCGGTGGTGCGCCGGCACGACCAGCCGCCGCAGGTGCTGGAGCTTGGCAGCTTCCCCGACATCGTCGCCC GCCTGAAGGTGGGTCAGGAGGGGACGGACACGGCGAAGGAAATGTATGCGGCCCTGTTCGGCAAGCTGTCGGGTGCGCTC GGTGGGGCTGAGCGTCTGTTCATCGTTCCGGATGCCGAGCTTTATGGCATTCCCTTCGCGGCGCTGCGGGATGGCGAAGG GCGATTCCTCGACCAGATCTACGAAGTGCGCCTGCTGACGCGCGAGGACGCCCTGCCCACCGCCGTGCGCCGCGACCGGC TCGCGCCGGGTGGCAAGGCGGTTCTGGCGGGCGGACTGGACTTCTCCTCCGGCAAGCAGAAGGGCCCGCGGGCGCTCCCG GCCACCGCGCGCGAGGTGGCGGAGGTGGGCAAGGTTCTGACGAGCGCGGGCTATGGCACGCGCGTCCTTACCGGAACTGC CGGCACGGAGGACGCGCTGCGTCAGGCCATTCCCGGCGCCTCCGTGGTGCATCTCGCCACCCACGGCTTCTTCGAGCCGC CCCATGATGGCCTGAGCGCGCTCTGGCGCGGCGGCATCGTGCTGGCGCGGGCGGGAGACGACAAGCCGCCGAAGGCCAAT GACCGTGACGGCTATCTCTATGCCGAGGAACTGATGGGCTGGGACCTCTCGGCCGCCGATCTCGTGGTCCTCTCCGCCTG CGAGACGGCGGTGGGCGACCGGAGCGCGGTGAGCGCCATTCGCGGCCTGCCGACGGCGCTTGCCATTGCCGGGGCGCGGC GCTCGCTGCTCACCCTCTGGCCGGTGGCAGATGCGGGCGCGGCCAATTTCATGATCGCCTTCTACCGTCATGCCGCCGAG CCCGGCGCGACTTTCTCCAGCGCCCTGCGCCAGACGCGGCTGGACGCCATCGCCGGCAAGGTGCCGCAGGCGGACGATCC CGAGGTGTGGGCGAGCTTCGTGATGTACGAGGGATAG
Upstream 100 bases:
>100_bases AAAGTGAGCGCGCTGCCCCATGTCCGGCAGGTGAAACAGCTCCGCTTCTGAAACCTCCCCGGCGCTTGGGGGTTGTCTCC GGGCGCCGGGCGGTAGCACC
Downstream 100 bases:
>100_bases CGGTCAGGCTGGCGAAGGCCTTCAGGCGGGCTTTGCACCCTTCGCCCGTGTCGCGGTGAGGATGCCCGTCAGCACCAGCG CATACCCGGCCGCATGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide Repeat Family; Filamentous Haemagglutinin Outer Membrane Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Domain Protein; Haemagglutination Activity Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Region; WD-40 Repeat-Containing Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Tetratricopeptide Tpr_3 Repeat-Containing Protein; Kinesin Light Chain; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Peptidase Domain-Containing Protein; Hemagglutination Activity Domain-Containing Protein; Peptidase Domain Protein; Sel1 Domain-Containing Protein; Peptidase-Like; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 918; Mature: 918
Protein sequence:
>918_residues MHRLFGADALQQALAQHAMRWRMSGRLVFLLRVAIGVVALSAGGAALAQTAGGTTQAMKGCERLLAEGKVQEGYPCLRDV LKTIAAGSDDARTLQEYRTWAEAFLQARQPRLAAALYEDALASRAASGKPLADLGRIHFAYSYYVLSRGPDKDKAIAHAR AGLDILEKTLGPGAYDTVAARDNLAVLLSDSGAIAPGLNLAESNFDIALKSLGEDEPLTWRVSNNFAEALRSIGRPEAAV PIDQVLLAKRVKHYGEGSIQALVSASNLALSYLEMGDKAQAMRYFRLQGRFGAKLADPTSEHEAQAKAWYTYTDIFFSPD PQLKPDMLEALMGLKDWRSAPDLMRVKASELAAKEYERQGKVRQGLALRQAAYEISASSFSARSPITFDALLGLARAHVR NQEPEKALATFRDLDRQLYDWTLREVGTAGNRFIAETTRVLADNFLYEFGRFALEEPSARPAFADAAGRWKALESGQRAR LRQMVDTLPDDVKPLAQEVIRLLGRQQEVLSERRTAAERRDEEALVQDVQKKSGELSVRLAALKLPEPPPLDAAIAGALG PKDALVNFVLITRRQGTRSSDAAIEDQRLLAVVRRHDQPPQVLELGSFPDIVARLKVGQEGTDTAKEMYAALFGKLSGAL GGAERLFIVPDAELYGIPFAALRDGEGRFLDQIYEVRLLTREDALPTAVRRDRLAPGGKAVLAGGLDFSSGKQKGPRALP ATAREVAEVGKVLTSAGYGTRVLTGTAGTEDALRQAIPGASVVHLATHGFFEPPHDGLSALWRGGIVLARAGDDKPPKAN DRDGYLYAEELMGWDLSAADLVVLSACETAVGDRSAVSAIRGLPTALAIAGARRSLLTLWPVADAGAANFMIAFYRHAAE PGATFSSALRQTRLDAIAGKVPQADDPEVWASFVMYEG
Sequences:
>Translated_918_residues MHRLFGADALQQALAQHAMRWRMSGRLVFLLRVAIGVVALSAGGAALAQTAGGTTQAMKGCERLLAEGKVQEGYPCLRDV LKTIAAGSDDARTLQEYRTWAEAFLQARQPRLAAALYEDALASRAASGKPLADLGRIHFAYSYYVLSRGPDKDKAIAHAR AGLDILEKTLGPGAYDTVAARDNLAVLLSDSGAIAPGLNLAESNFDIALKSLGEDEPLTWRVSNNFAEALRSIGRPEAAV PIDQVLLAKRVKHYGEGSIQALVSASNLALSYLEMGDKAQAMRYFRLQGRFGAKLADPTSEHEAQAKAWYTYTDIFFSPD PQLKPDMLEALMGLKDWRSAPDLMRVKASELAAKEYERQGKVRQGLALRQAAYEISASSFSARSPITFDALLGLARAHVR NQEPEKALATFRDLDRQLYDWTLREVGTAGNRFIAETTRVLADNFLYEFGRFALEEPSARPAFADAAGRWKALESGQRAR LRQMVDTLPDDVKPLAQEVIRLLGRQQEVLSERRTAAERRDEEALVQDVQKKSGELSVRLAALKLPEPPPLDAAIAGALG PKDALVNFVLITRRQGTRSSDAAIEDQRLLAVVRRHDQPPQVLELGSFPDIVARLKVGQEGTDTAKEMYAALFGKLSGAL GGAERLFIVPDAELYGIPFAALRDGEGRFLDQIYEVRLLTREDALPTAVRRDRLAPGGKAVLAGGLDFSSGKQKGPRALP ATAREVAEVGKVLTSAGYGTRVLTGTAGTEDALRQAIPGASVVHLATHGFFEPPHDGLSALWRGGIVLARAGDDKPPKAN DRDGYLYAEELMGWDLSAADLVVLSACETAVGDRSAVSAIRGLPTALAIAGARRSLLTLWPVADAGAANFMIAFYRHAAE PGATFSSALRQTRLDAIAGKVPQADDPEVWASFVMYEG >Mature_918_residues MHRLFGADALQQALAQHAMRWRMSGRLVFLLRVAIGVVALSAGGAALAQTAGGTTQAMKGCERLLAEGKVQEGYPCLRDV LKTIAAGSDDARTLQEYRTWAEAFLQARQPRLAAALYEDALASRAASGKPLADLGRIHFAYSYYVLSRGPDKDKAIAHAR AGLDILEKTLGPGAYDTVAARDNLAVLLSDSGAIAPGLNLAESNFDIALKSLGEDEPLTWRVSNNFAEALRSIGRPEAAV PIDQVLLAKRVKHYGEGSIQALVSASNLALSYLEMGDKAQAMRYFRLQGRFGAKLADPTSEHEAQAKAWYTYTDIFFSPD PQLKPDMLEALMGLKDWRSAPDLMRVKASELAAKEYERQGKVRQGLALRQAAYEISASSFSARSPITFDALLGLARAHVR NQEPEKALATFRDLDRQLYDWTLREVGTAGNRFIAETTRVLADNFLYEFGRFALEEPSARPAFADAAGRWKALESGQRAR LRQMVDTLPDDVKPLAQEVIRLLGRQQEVLSERRTAAERRDEEALVQDVQKKSGELSVRLAALKLPEPPPLDAAIAGALG PKDALVNFVLITRRQGTRSSDAAIEDQRLLAVVRRHDQPPQVLELGSFPDIVARLKVGQEGTDTAKEMYAALFGKLSGAL GGAERLFIVPDAELYGIPFAALRDGEGRFLDQIYEVRLLTREDALPTAVRRDRLAPGGKAVLAGGLDFSSGKQKGPRALP ATAREVAEVGKVLTSAGYGTRVLTGTAGTEDALRQAIPGASVVHLATHGFFEPPHDGLSALWRGGIVLARAGDDKPPKAN DRDGYLYAEELMGWDLSAADLVVLSACETAVGDRSAVSAIRGLPTALAIAGARRSLLTLWPVADAGAANFMIAFYRHAAE PGATFSSALRQTRLDAIAGKVPQADDPEVWASFVMYEG
Specific function: Unknown
COG id: COG4995
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99285; Mature: 99285
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRLFGADALQQALAQHAMRWRMSGRLVFLLRVAIGVVALSAGGAALAQTAGGTTQAMKG CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHH CERLLAEGKVQEGYPCLRDVLKTIAAGSDDARTLQEYRTWAEAFLQARQPRLAAALYEDA HHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LASRAASGKPLADLGRIHFAYSYYVLSRGPDKDKAIAHARAGLDILEKTLGPGAYDTVAA HHHHCCCCCCHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCC RDNLAVLLSDSGAIAPGLNLAESNFDIALKSLGEDEPLTWRVSNNFAEALRSIGRPEAAV CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCC PIDQVLLAKRVKHYGEGSIQALVSASNLALSYLEMGDKAQAMRYFRLQGRFGAKLADPTS CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC EHEAQAKAWYTYTDIFFSPDPQLKPDMLEALMGLKDWRSAPDLMRVKASELAAKEYERQG HHHHHHHEEEEEEEEEECCCCCCCHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHC KVRQGLALRQAAYEISASSFSARSPITFDALLGLARAHVRNQEPEKALATFRDLDRQLYD HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH WTLREVGTAGNRFIAETTRVLADNFLYEFGRFALEEPSARPAFADAAGRWKALESGQRAR HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHH LRQMVDTLPDDVKPLAQEVIRLLGRQQEVLSERRTAAERRDEEALVQDVQKKSGELSVRL HHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEE AALKLPEPPPLDAAIAGALGPKDALVNFVLITRRQGTRSSDAAIEDQRLLAVVRRHDQPP EEEECCCCCCCCHHHHHCCCCHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC QVLELGSFPDIVARLKVGQEGTDTAKEMYAALFGKLSGALGGAERLFIVPDAELYGIPFA HHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCHH ALRDGEGRFLDQIYEVRLLTREDALPTAVRRDRLAPGGKAVLAGGLDFSSGKQKGPRALP EEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC ATAREVAEVGKVLTSAGYGTRVLTGTAGTEDALRQAIPGASVVHLATHGFFEPPHDGLSA HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCCEEHHHHCCCCCCCHHHHHH LWRGGIVLARAGDDKPPKANDRDGYLYAEELMGWDLSAADLVVLSACETAVGDRSAVSAI HHHCCEEEEECCCCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH RGLPTALAIAGARRSLLTLWPVADAGAANFMIAFYRHAAEPGATFSSALRQTRLDAIAGK HCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC VPQADDPEVWASFVMYEG CCCCCCHHHHHHHHHCCC >Mature Secondary Structure MHRLFGADALQQALAQHAMRWRMSGRLVFLLRVAIGVVALSAGGAALAQTAGGTTQAMKG CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHH CERLLAEGKVQEGYPCLRDVLKTIAAGSDDARTLQEYRTWAEAFLQARQPRLAAALYEDA HHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LASRAASGKPLADLGRIHFAYSYYVLSRGPDKDKAIAHARAGLDILEKTLGPGAYDTVAA HHHHCCCCCCHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCC RDNLAVLLSDSGAIAPGLNLAESNFDIALKSLGEDEPLTWRVSNNFAEALRSIGRPEAAV CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCC PIDQVLLAKRVKHYGEGSIQALVSASNLALSYLEMGDKAQAMRYFRLQGRFGAKLADPTS CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC EHEAQAKAWYTYTDIFFSPDPQLKPDMLEALMGLKDWRSAPDLMRVKASELAAKEYERQG HHHHHHHEEEEEEEEEECCCCCCCHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHC KVRQGLALRQAAYEISASSFSARSPITFDALLGLARAHVRNQEPEKALATFRDLDRQLYD HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH WTLREVGTAGNRFIAETTRVLADNFLYEFGRFALEEPSARPAFADAAGRWKALESGQRAR HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHH LRQMVDTLPDDVKPLAQEVIRLLGRQQEVLSERRTAAERRDEEALVQDVQKKSGELSVRL HHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEE AALKLPEPPPLDAAIAGALGPKDALVNFVLITRRQGTRSSDAAIEDQRLLAVVRRHDQPP EEEECCCCCCCCHHHHHCCCCHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC QVLELGSFPDIVARLKVGQEGTDTAKEMYAALFGKLSGALGGAERLFIVPDAELYGIPFA HHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCHH ALRDGEGRFLDQIYEVRLLTREDALPTAVRRDRLAPGGKAVLAGGLDFSSGKQKGPRALP EEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC ATAREVAEVGKVLTSAGYGTRVLTGTAGTEDALRQAIPGASVVHLATHGFFEPPHDGLSA HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCCEEHHHHCCCCCCCHHHHHH LWRGGIVLARAGDDKPPKANDRDGYLYAEELMGWDLSAADLVVLSACETAVGDRSAVSAI HHHCCEEEEECCCCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH RGLPTALAIAGARRSLLTLWPVADAGAANFMIAFYRHAAEPGATFSSALRQTRLDAIAGK HCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC VPQADDPEVWASFVMYEG CCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA