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The map label for this gene is ydeR [H]

Identifier: 158422590

GI number: 158422590

Start: 1077013

End: 1078203

Strand: Direct

Name: ydeR [H]

Synonym: AZC_0966

Alternate gene names: 158422590

Gene position: 1077013-1078203 (Clockwise)

Preceding gene: 158422587

Following gene: 158422592

Centisome position: 20.06

GC content: 71.2

Gene sequence:

>1191_bases
ATGACAATGGGAACCACGATGGATGGTGCGGCCTCTGCCGGGCTTGGGCGCGGCACCACCTTTGCCATGGCGGCCGCAGC
CGGCATCGCCGTCGCCAACATCTATTACAACCAGCCCATGCTGGCGCTCATGGAAGCGGCCCTGCCGGGCCCGCTGACCG
CCGCCGTACCCACGGCCACCCAGCTCGGCTATGCGGTGGGGCTGTTCCTGCTGGTGCCGCTGGGTGACCTGATGGAGCGG
CGGCGCCTCATCGTCATCCAGTTCGGCGTGCTGGCGCTCGCCATGGCCATGGTGGCTCTGGCACCTACGGCCGGGCTCGT
TCTGGCGGCGTCCTTCCTGGTGGGGCTGGCCTCCACGGTGGCGCAGCAGATCATCCCGCTCGCCGCTCATCTCGCGGCCC
CCGCCCGCCGTGGCGCGACCGTCGGCACGGTGATGGCCGGGCTGCTCACCGGCATCCTGCTCAGCCGGACGCTGGCCGGT
TTCGTTGCCACCAACTGGGGCTGGCGGGACATGTTCGGCCTCGGAGCGCCCATGGCGCTGGTGGCCGGCGGCCTGATGGC
CCTGACGCTGCCCGCGAGCCGGCCGGACAGCGGCCTCGGCTATGGCGCGCTGATGCGCTCCATCCTGCATCTGTGGCGGG
AGTTCCCGGCGCTGCGCATCGCCGCGGTGACGCAGGGGCTGCTGTTCGCCACCTTCACCGGCTTCTGGACCATCCTCGCC
TTCCGGCTTCAGGCGCCGCCGTTCGGCCTCGGCGCCGACGTGGCGGGCCTGTTCGGCATCGTCGGCGCGGTGGGCATCCT
CTCGGCGCCGCTGGCCGGGCGCATCGCGGATCGCCACGGCCCGTCCCGCATGGTGCTCGTCGGCGCGGTGGTGACGCTGG
TGTCGTTCGTGGTGTTCGGCGTGTGGGGTTCGCTGGCGGGCTTGATCGCCGGCGTCATCCTGCTCGACTTCGGCGTGCAG
GCGGCGATGATCTCGAACCAGCACATCGTCTTTGCCCTGCGTCCCGAAGCCCGCGGCCGCATCAACACGCTTTACATGGG
CAGCATCTTCATCGGCGGTGCCTCGGGCTCTGCCGGCGCGACGCTTGCCTGGTCCTTCGGCGGCTGGGGCGCGGTCTGCG
TGCTTGGTGCGGTGCTCGGCCTTCTCGCGACGGTGCTCCAGATGGCCCGGGCGAAGTCCGCCGGCCACTGA

Upstream 100 bases:

>100_bases
GCGTTATGGAGTAGCTTCCGCTCCGACTGGATTCCGGCGCGATGCCGGAACCCGCCGCCGGGCACCATCGGGCGTCCCGG
CCGGATCGGGAGATCAAGAC

Downstream 100 bases:

>100_bases
CTTCAGGATCCTTCGAGGGTCGGGCCCGCCGTGCGTCGCACGGCGGGCCTTTTCGTATCAGGCGGCGGGCGGCGTCGGGG
CTTCGCCCGCATTGGCCGGC

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MTMGTTMDGAASAGLGRGTTFAMAAAAGIAVANIYYNQPMLALMEAALPGPLTAAVPTATQLGYAVGLFLLVPLGDLMER
RRLIVIQFGVLALAMAMVALAPTAGLVLAASFLVGLASTVAQQIIPLAAHLAAPARRGATVGTVMAGLLTGILLSRTLAG
FVATNWGWRDMFGLGAPMALVAGGLMALTLPASRPDSGLGYGALMRSILHLWREFPALRIAAVTQGLLFATFTGFWTILA
FRLQAPPFGLGADVAGLFGIVGAVGILSAPLAGRIADRHGPSRMVLVGAVVTLVSFVVFGVWGSLAGLIAGVILLDFGVQ
AAMISNQHIVFALRPEARGRINTLYMGSIFIGGASGSAGATLAWSFGGWGAVCVLGAVLGLLATVLQMARAKSAGH

Sequences:

>Translated_396_residues
MTMGTTMDGAASAGLGRGTTFAMAAAAGIAVANIYYNQPMLALMEAALPGPLTAAVPTATQLGYAVGLFLLVPLGDLMER
RRLIVIQFGVLALAMAMVALAPTAGLVLAASFLVGLASTVAQQIIPLAAHLAAPARRGATVGTVMAGLLTGILLSRTLAG
FVATNWGWRDMFGLGAPMALVAGGLMALTLPASRPDSGLGYGALMRSILHLWREFPALRIAAVTQGLLFATFTGFWTILA
FRLQAPPFGLGADVAGLFGIVGAVGILSAPLAGRIADRHGPSRMVLVGAVVTLVSFVVFGVWGSLAGLIAGVILLDFGVQ
AAMISNQHIVFALRPEARGRINTLYMGSIFIGGASGSAGATLAWSFGGWGAVCVLGAVLGLLATVLQMARAKSAGH
>Mature_395_residues
TMGTTMDGAASAGLGRGTTFAMAAAAGIAVANIYYNQPMLALMEAALPGPLTAAVPTATQLGYAVGLFLLVPLGDLMERR
RLIVIQFGVLALAMAMVALAPTAGLVLAASFLVGLASTVAQQIIPLAAHLAAPARRGATVGTVMAGLLTGILLSRTLAGF
VATNWGWRDMFGLGAPMALVAGGLMALTLPASRPDSGLGYGALMRSILHLWREFPALRIAAVTQGLLFATFTGFWTILAF
RLQAPPFGLGADVAGLFGIVGAVGILSAPLAGRIADRHGPSRMVLVGAVVTLVSFVVFGVWGSLAGLIAGVILLDFGVQA
AMISNQHIVFALRPEARGRINTLYMGSIFIGGASGSAGATLAWSFGGWGAVCVLGAVLGLLATVLQMARAKSAGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40294; Mature: 40162

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMGTTMDGAASAGLGRGTTFAMAAAAGIAVANIYYNQPMLALMEAALPGPLTAAVPTAT
CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCHH
QLGYAVGLFLLVPLGDLMERRRLIVIQFGVLALAMAMVALAPTAGLVLAASFLVGLASTV
HHHHHHHHHHHHCHHHHHHCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AQQIIPLAAHLAAPARRGATVGTVMAGLLTGILLSRTLAGFVATNWGWRDMFGLGAPMAL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHH
VAGGLMALTLPASRPDSGLGYGALMRSILHLWREFPALRIAAVTQGLLFATFTGFWTILA
HHCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FRLQAPPFGLGADVAGLFGIVGAVGILSAPLAGRIADRHGPSRMVLVGAVVTLVSFVVFG
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VWGSLAGLIAGVILLDFGVQAAMISNQHIVFALRPEARGRINTLYMGSIFIGGASGSAGA
HHHHHHHHHHHHHHHHHCCHHEEECCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCC
TLAWSFGGWGAVCVLGAVLGLLATVLQMARAKSAGH
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TMGTTMDGAASAGLGRGTTFAMAAAAGIAVANIYYNQPMLALMEAALPGPLTAAVPTAT
CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCHH
QLGYAVGLFLLVPLGDLMERRRLIVIQFGVLALAMAMVALAPTAGLVLAASFLVGLASTV
HHHHHHHHHHHHCHHHHHHCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AQQIIPLAAHLAAPARRGATVGTVMAGLLTGILLSRTLAGFVATNWGWRDMFGLGAPMAL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHH
VAGGLMALTLPASRPDSGLGYGALMRSILHLWREFPALRIAAVTQGLLFATFTGFWTILA
HHCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FRLQAPPFGLGADVAGLFGIVGAVGILSAPLAGRIADRHGPSRMVLVGAVVTLVSFVVFG
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VWGSLAGLIAGVILLDFGVQAAMISNQHIVFALRPEARGRINTLYMGSIFIGGASGSAGA
HHHHHHHHHHHHHHHHHCCHHEEECCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCC
TLAWSFGGWGAVCVLGAVLGLLATVLQMARAKSAGH
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]