| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is sam [H]
Identifier: 158422524
GI number: 158422524
Start: 1009431
End: 1010402
Strand: Direct
Name: sam [H]
Synonym: AZC_0900
Alternate gene names: 158422524
Gene position: 1009431-1010402 (Clockwise)
Preceding gene: 158422523
Following gene: 158422531
Centisome position: 18.8
GC content: 67.8
Gene sequence:
>972_bases GTGTGCCCCATGAACCCCGCGTCTGCCATGCGTGGGATCGTGGCGATGATCGCCGCGATGGGCTGCTTCATCACCAACGA CACCCTGCTCAAGATCGCGGTGGTGGACTTCCCGGTCGGTGAAGTCATTGCCATCCGCTCGATCTTCGCAGCGGCGCTCC TGACGGCGCTCATCGCCTGGAAGGGCGAGTTGCGCTTCGCCCGCCATCTGGCAGACCGCCGCATCTTCGTGCGCTCCGGC CTCGATGCGGTGACGACCTTCTCCTATGTGATCGGCCTCACGGTTCTGCCGCTCGCCTCCGCCACCACCATCTACATGGC CGCCCCACTCATCACGACGGCGCTCTGCGTGCCGCTGCTGGGCGAGAAGGTGGGACTGAAGCGCTGGTGCGCCATTATCG TGGGCTTCAGCGGCGCCGTCATCGTGACGCGACCGGAGCCGTCCGCTTTCGATGCCATGGCCATCCTGCCGCTGATCGCC GCGCTGTGCGGCTCGCTGCGCGACATACTCACCCGCAACATCAATGCGGTGGTGCCCGGTGCGGTGATCGCCCTGGCGAG CGCGGTCATGCTGGGCTTCGTCGGCCTGTCCTTCTCCGGCTGGGAAGTCTGGTCGGCCCCCACGGTGAAGATGCTGGCGC TGGTGTGTGGGGCCGGAACGGCCTTCGCCGTCGGCAACCTGCTGCTGATCTATGCCTTCCGCAATGCGCCGGTGGTGGTC ATCTCGCCGCTGCGCTACGTGCTGGTGCCCGCTGCCCTTGCGGTCGGCATTGTCGTGTTCGGCAATTATCCGGACATCTG GGCCAGTGTCGGCGCCATTCTGGTGGTCGCGGCCGGTCTCTATTCCATCCAGAGCGAAGCCCGCCGCAACAAGGCCGAGC GGCGTGTGGCGGCGGCGCAGGCGGCGGTGGCCCCCATGTCGGGCGGCGCGCCTCTCGCTGGTGCGGTCGCCCGCGCGCCC GCCAACGACTGA
Upstream 100 bases:
>100_bases TCACGTCAAATAAGCTAATCGTTTCGTAGAGGAAATTGCCCCGGAACGAGGGTGTCGTGAGTGCGTCGGCGTATCGGCTT GCGGATGAGCCCTGTTTCGG
Downstream 100 bases:
>100_bases GCGCGGCTCAGGACGCCTTCTGACCTTCGGACGTGCTCCGGGGGCGGTAGGTGCCGGTCGCCGGATCGCGCTCCAGCGGC GTCGGCTCGGGCTCGGCAGC
Product: drug/metabolite transporter (DMT)permease superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MCPMNPASAMRGIVAMIAAMGCFITNDTLLKIAVVDFPVGEVIAIRSIFAAALLTALIAWKGELRFARHLADRRIFVRSG LDAVTTFSYVIGLTVLPLASATTIYMAAPLITTALCVPLLGEKVGLKRWCAIIVGFSGAVIVTRPEPSAFDAMAILPLIA ALCGSLRDILTRNINAVVPGAVIALASAVMLGFVGLSFSGWEVWSAPTVKMLALVCGAGTAFAVGNLLLIYAFRNAPVVV ISPLRYVLVPAALAVGIVVFGNYPDIWASVGAILVVAAGLYSIQSEARRNKAERRVAAAQAAVAPMSGGAPLAGAVARAP AND
Sequences:
>Translated_323_residues MCPMNPASAMRGIVAMIAAMGCFITNDTLLKIAVVDFPVGEVIAIRSIFAAALLTALIAWKGELRFARHLADRRIFVRSG LDAVTTFSYVIGLTVLPLASATTIYMAAPLITTALCVPLLGEKVGLKRWCAIIVGFSGAVIVTRPEPSAFDAMAILPLIA ALCGSLRDILTRNINAVVPGAVIALASAVMLGFVGLSFSGWEVWSAPTVKMLALVCGAGTAFAVGNLLLIYAFRNAPVVV ISPLRYVLVPAALAVGIVVFGNYPDIWASVGAILVVAAGLYSIQSEARRNKAERRVAAAQAAVAPMSGGAPLAGAVARAP AND >Mature_323_residues MCPMNPASAMRGIVAMIAAMGCFITNDTLLKIAVVDFPVGEVIAIRSIFAAALLTALIAWKGELRFARHLADRRIFVRSG LDAVTTFSYVIGLTVLPLASATTIYMAAPLITTALCVPLLGEKVGLKRWCAIIVGFSGAVIVTRPEPSAFDAMAILPLIA ALCGSLRDILTRNINAVVPGAVIALASAVMLGFVGLSFSGWEVWSAPTVKMLALVCGAGTAFAVGNLLLIYAFRNAPVVV ISPLRYVLVPAALAVGIVVFGNYPDIWASVGAILVVAAGLYSIQSEARRNKAERRVAAAQAAVAPMSGGAPLAGAVARAP AND
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33503; Mature: 33503
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPMNPASAMRGIVAMIAAMGCFITNDTLLKIAVVDFPVGEVIAIRSIFAAALLTALIAW CCCCCHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH KGELRFARHLADRRIFVRSGLDAVTTFSYVIGLTVLPLASATTIYMAAPLITTALCVPLL CCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEKVGLKRWCAIIVGFSGAVIVTRPEPSAFDAMAILPLIAALCGSLRDILTRNINAVVPG CCHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH AVIALASAVMLGFVGLSFSGWEVWSAPTVKMLALVCGAGTAFAVGNLLLIYAFRNAPVVV HHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCHHHHHHHEEEEEEECCCCEEE ISPLRYVLVPAALAVGIVVFGNYPDIWASVGAILVVAAGLYSIQSEARRNKAERRVAAAQ ECCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVAPMSGGAPLAGAVARAPAND HHHCCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure MCPMNPASAMRGIVAMIAAMGCFITNDTLLKIAVVDFPVGEVIAIRSIFAAALLTALIAW CCCCCHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH KGELRFARHLADRRIFVRSGLDAVTTFSYVIGLTVLPLASATTIYMAAPLITTALCVPLL CCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEKVGLKRWCAIIVGFSGAVIVTRPEPSAFDAMAILPLIAALCGSLRDILTRNINAVVPG CCHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH AVIALASAVMLGFVGLSFSGWEVWSAPTVKMLALVCGAGTAFAVGNLLLIYAFRNAPVVV HHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCHHHHHHHEEEEEEECCCCEEE ISPLRYVLVPAALAVGIVVFGNYPDIWASVGAILVVAAGLYSIQSEARRNKAERRVAAAQ ECCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVAPMSGGAPLAGAVARAPAND HHHCCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA