| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is proP [H]
Identifier: 158422501
GI number: 158422501
Start: 977638
End: 979305
Strand: Reverse
Name: proP [H]
Synonym: AZC_0877
Alternate gene names: 158422501
Gene position: 979305-977638 (Counterclockwise)
Preceding gene: 158422502
Following gene: 158422499
Centisome position: 18.24
GC content: 65.71
Gene sequence:
>1668_bases ATGTCTGTCACGACTGCTGGCCCGGCCACGGCCCATGCACCGATGACGCGGGAGGAGAAGAAGGTCATCTTCGCCTCGTC CCTCGGCACGGTGTTCGAGTGGTACGATTTCTATCTCTACGGATCGCTTGCCGCGATCATCGGCGCGCAATTCTTCAGCG CCTATCCGCCGGCGACCCGCGATATCTTCGCGCTGCTGGCCTTCGCCGCCGGCTTCCTCGTGCGTCCCTTCGGCGCCATC GTGTTCGGGCGCATCGGCGATCTCGTCGGCCGCAAGTACACCTTCCTCGTCACCATCCTCATCATGGGCCTGTCGACCTT CATCGTCGGCATCCTGCCCAATGCGGCCACCATCGGCATCGCGGCTCCGATCATCCTGATCGTCCTGCGCCTGCTGCAGG GCCTCGCGCTCGGCGGCGAGTATGGCGGCGCGGCCACCTACGTGGCGGAGCATGCGCCGCACGGCCGCCGCGGCTTCTAC ACCTCCTGGATCCAGACCACCGCGACCCTGGGCCTGTTCCTGTCGCTGCTGGTGATCCTGTTCACCCGCTCCATCGTGGG CGAGCAGAACTTCGCCGCCTGGGGCTGGCGCATTCCCTTCCTGGTGTCCATCGCACTGCTCGGCATCTCGGTGTGGATCC GCTTCCAGCTCAATGAATCCCCGGCCTTCAAGAAGATGAAGGAAGAGGGCACGACCTCCAAGGCGCCGCTCTCGGAAGCC TTCGGCCAGTGGAAGAACCTGAAGTTCGTGCTGCTCGCCCTCTTCGGCCTCGTCGCCGGCCAGGGTGTGGTCTGGTACAC GGGCCAGTTCTATGCCCTGTTCTTCCTGCAATCGATCCTGAAGGTGGATGGCTACACCTCCAACCTGCTGATCGCGTGGT CGCTGCTGCTGGGCACGGGCTTCTTCGTGTTCTTCGGCTGGCTGTCGGACAAGATCGGCCGCAAGCCCATCATCCTTGCC GGCTGCCTCATCGCCGCCGCCAGCTACTTCCCGCTCTTCAACGCCATCACCTCCTACGCCAACCCGGCGCTGGAGAATGC GATCCAGAACGTGAAGGTCACCGTCGTCGCCTCGCCCGGCGAATGCGGCAGCCTCTTCAACCCGGTCGGCACCCGCGTCT ACTCGGCGCCGTGCGACGTGGCCCGCGACTTCCTCGCCAAGTCCTCGGTGAAGTATTCCACCGAGACCGGCGCGGCGGGC TCCGGCACCGTGCTGAAGGTCAACGACACCGTGGTGCCCTTCGGCCCCGACTTCGCCAAGACCGCCACGGCGGCGCTCCA GGCGGCGGGCTACCCGAGCGCGGCGACCAACAAGGACGTGATCAAGATGTCGCATCCGTTCGACATCTTCCAGCCGCGGG TCGCGGCGGTCATCGGCCTGCTGTTCGTCCTCGTGCTCTTCGTGACCATGGTGTACGGCCCCATCGCCGCCGCGCTGGTG GAACTCTTCCCCACCCGCGTCCGCTACACCTCCATGTCGCTGCCCTACCATATCGGCAACGGCTGGTTCGGCGGCCTGCT GCCGGCCACCGCCTTCGCCATGGTGGCGGCCACCGGCGACATCTACTACGGCCTCTGGTACCCGATCGTGATCGCGCTCG GCACCTTCGTCATCGGCCTGCTGTTCGTGCCGGAGACCAAGGACCGGGACATCGACGACTGGCACTGA
Upstream 100 bases:
>100_bases GCGGACGGTTGCTCGCAGGTGCCTCAGCTCCCGGGCGCGCCCGCCTCCGCCTTCCGGCCCCATTGGGCCGCCGAGGCACC CGCAACTGGGAGGAGGAACA
Downstream 100 bases:
>100_bases GCGGGTTTGCCCCGGCCGCGCGCCGGCCGGGGCTTCCATCCTTCAAAAAGCAACGGCCTCGCGTCACCGCGAGGCCGTTC GCTTTTCAGCCCTCCCCTTC
Product: general substrate transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MSVTTAGPATAHAPMTREEKKVIFASSLGTVFEWYDFYLYGSLAAIIGAQFFSAYPPATRDIFALLAFAAGFLVRPFGAI VFGRIGDLVGRKYTFLVTILIMGLSTFIVGILPNAATIGIAAPIILIVLRLLQGLALGGEYGGAATYVAEHAPHGRRGFY TSWIQTTATLGLFLSLLVILFTRSIVGEQNFAAWGWRIPFLVSIALLGISVWIRFQLNESPAFKKMKEEGTTSKAPLSEA FGQWKNLKFVLLALFGLVAGQGVVWYTGQFYALFFLQSILKVDGYTSNLLIAWSLLLGTGFFVFFGWLSDKIGRKPIILA GCLIAAASYFPLFNAITSYANPALENAIQNVKVTVVASPGECGSLFNPVGTRVYSAPCDVARDFLAKSSVKYSTETGAAG SGTVLKVNDTVVPFGPDFAKTATAALQAAGYPSAATNKDVIKMSHPFDIFQPRVAAVIGLLFVLVLFVTMVYGPIAAALV ELFPTRVRYTSMSLPYHIGNGWFGGLLPATAFAMVAATGDIYYGLWYPIVIALGTFVIGLLFVPETKDRDIDDWH
Sequences:
>Translated_555_residues MSVTTAGPATAHAPMTREEKKVIFASSLGTVFEWYDFYLYGSLAAIIGAQFFSAYPPATRDIFALLAFAAGFLVRPFGAI VFGRIGDLVGRKYTFLVTILIMGLSTFIVGILPNAATIGIAAPIILIVLRLLQGLALGGEYGGAATYVAEHAPHGRRGFY TSWIQTTATLGLFLSLLVILFTRSIVGEQNFAAWGWRIPFLVSIALLGISVWIRFQLNESPAFKKMKEEGTTSKAPLSEA FGQWKNLKFVLLALFGLVAGQGVVWYTGQFYALFFLQSILKVDGYTSNLLIAWSLLLGTGFFVFFGWLSDKIGRKPIILA GCLIAAASYFPLFNAITSYANPALENAIQNVKVTVVASPGECGSLFNPVGTRVYSAPCDVARDFLAKSSVKYSTETGAAG SGTVLKVNDTVVPFGPDFAKTATAALQAAGYPSAATNKDVIKMSHPFDIFQPRVAAVIGLLFVLVLFVTMVYGPIAAALV ELFPTRVRYTSMSLPYHIGNGWFGGLLPATAFAMVAATGDIYYGLWYPIVIALGTFVIGLLFVPETKDRDIDDWH >Mature_554_residues SVTTAGPATAHAPMTREEKKVIFASSLGTVFEWYDFYLYGSLAAIIGAQFFSAYPPATRDIFALLAFAAGFLVRPFGAIV FGRIGDLVGRKYTFLVTILIMGLSTFIVGILPNAATIGIAAPIILIVLRLLQGLALGGEYGGAATYVAEHAPHGRRGFYT SWIQTTATLGLFLSLLVILFTRSIVGEQNFAAWGWRIPFLVSIALLGISVWIRFQLNESPAFKKMKEEGTTSKAPLSEAF GQWKNLKFVLLALFGLVAGQGVVWYTGQFYALFFLQSILKVDGYTSNLLIAWSLLLGTGFFVFFGWLSDKIGRKPIILAG CLIAAASYFPLFNAITSYANPALENAIQNVKVTVVASPGECGSLFNPVGTRVYSAPCDVARDFLAKSSVKYSTETGAAGS GTVLKVNDTVVPFGPDFAKTATAALQAAGYPSAATNKDVIKMSHPFDIFQPRVAAVIGLLFVLVLFVTMVYGPIAAALVE LFPTRVRYTSMSLPYHIGNGWFGGLLPATAFAMVAATGDIYYGLWYPIVIALGTFVIGLLFVPETKDRDIDDWH
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=332, Percent_Identity=37.0481927710843, Blast_Score=204, Evalue=1e-53, Organism=Escherichia coli, GI1788292, Length=335, Percent_Identity=34.0298507462687, Blast_Score=193, Evalue=2e-50, Organism=Escherichia coli, GI1788942, Length=335, Percent_Identity=33.4328358208955, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI1789941, Length=349, Percent_Identity=34.9570200573066, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI87082404, Length=329, Percent_Identity=24.9240121580547, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI87082231, Length=242, Percent_Identity=26.4462809917355, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 59909; Mature: 59777
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTTAGPATAHAPMTREEKKVIFASSLGTVFEWYDFYLYGSLAAIIGAQFFSAYPPATR CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DIFALLAFAAGFLVRPFGAIVFGRIGDLVGRKYTFLVTILIMGLSTFIVGILPNAATIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AAPIILIVLRLLQGLALGGEYGGAATYVAEHAPHGRRGFYTSWIQTTATLGLFLSLLVIL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FTRSIVGEQNFAAWGWRIPFLVSIALLGISVWIRFQLNESPAFKKMKEEGTTSKAPLSEA HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCCCCCCHHHH FGQWKNLKFVLLALFGLVAGQGVVWYTGQFYALFFLQSILKVDGYTSNLLIAWSLLLGTG HHHHCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FFVFFGWLSDKIGRKPIILAGCLIAAASYFPLFNAITSYANPALENAIQNVKVTVVASPG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEECCC ECGSLFNPVGTRVYSAPCDVARDFLAKSSVKYSTETGAAGSGTVLKVNDTVVPFGPDFAK CCCHHHCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEECCCCCHHH TATAALQAAGYPSAATNKDVIKMSHPFDIFQPRVAAVIGLLFVLVLFVTMVYGPIAAALV HHHHHHHHCCCCCCCCCCCEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELFPTRVRYTSMSLPYHIGNGWFGGLLPATAFAMVAATGDIYYGLWYPIVIALGTFVIGL HHHHHHHEEEEECCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LFVPETKDRDIDDWH HCCCCCCCCCCCCCC >Mature Secondary Structure SVTTAGPATAHAPMTREEKKVIFASSLGTVFEWYDFYLYGSLAAIIGAQFFSAYPPATR CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DIFALLAFAAGFLVRPFGAIVFGRIGDLVGRKYTFLVTILIMGLSTFIVGILPNAATIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AAPIILIVLRLLQGLALGGEYGGAATYVAEHAPHGRRGFYTSWIQTTATLGLFLSLLVIL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FTRSIVGEQNFAAWGWRIPFLVSIALLGISVWIRFQLNESPAFKKMKEEGTTSKAPLSEA HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCCCCCCHHHH FGQWKNLKFVLLALFGLVAGQGVVWYTGQFYALFFLQSILKVDGYTSNLLIAWSLLLGTG HHHHCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FFVFFGWLSDKIGRKPIILAGCLIAAASYFPLFNAITSYANPALENAIQNVKVTVVASPG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEECCC ECGSLFNPVGTRVYSAPCDVARDFLAKSSVKYSTETGAAGSGTVLKVNDTVVPFGPDFAK CCCHHHCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEECCCCCHHH TATAALQAAGYPSAATNKDVIKMSHPFDIFQPRVAAVIGLLFVLVLFVTMVYGPIAAALV HHHHHHHHCCCCCCCCCCCEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELFPTRVRYTSMSLPYHIGNGWFGGLLPATAFAMVAATGDIYYGLWYPIVIALGTFVIGL HHHHHHHEEEEECCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LFVPETKDRDIDDWH HCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]