| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is icc [H]
Identifier: 158422410
GI number: 158422410
Start: 887595
End: 888425
Strand: Direct
Name: icc [H]
Synonym: AZC_0786
Alternate gene names: 158422410
Gene position: 887595-888425 (Clockwise)
Preceding gene: 158422409
Following gene: 158422414
Centisome position: 16.53
GC content: 68.83
Gene sequence:
>831_bases ATGCTGATTGCCCAACTGACCGACACGCACATCCGCCTGCCGGGCCGTCTCGCCTATGGCGTAGTGGACACTGCCGCGTA TCTGGAACGTGCCGTGGCCTATCTCAGGAGCCTGCCGCGCCAGCCGGACGTGGTCATCGTCACCGGCGATCTGACCGATT TCGACACGCCGGAGGAATACGCCCGCTTCCGGGCCATCACCGCTCCGCTGTCCATGCCGCTCTTGCCCGTGCCGGGCAAT CACGACAGTTCCGCCGGGCTGCGCGCGGCTTTTCCGCAGATCGCCCGGCAGGCCGGCGGTGGGGCCAGCGACAAGCTGAA CTATGTGGTGGACGGCCATCCCGTCCGCCTTGTTCTTCTGGACTCCTCCGTGCCCGGCAAGCCGCACGGGGAACTCGGGA CGGCGACACTCGCCTGGCTCGACGCGCAGCTCGGCGCGGCGCCGGAGCGTCCGACGCTCATCGGCCTGCACCATCCGCCC TTCGTGACCGGCATCCGCCACATGGACGTGCAGAATTTGTTCGATGCAGCGGCGCTGGAAGAGGTTTTGCTGCGGCACCC GCAGGTGCTGGCCCTGACCTGCGGCCACATCCACCGCACGGTGGTGACGGGCTTTGCGGGACGTCCCGCCATGATCGCGC CCTCGCCGGCCCATGCGGTGAGCCTTGCCCTCGCCCCCGACGCGCCGCCCAGCTTCCACATGGAGCCGCCCGCCGTGGCG CTGCATCTGTTCGAGGGCGGCCGGATCGTCTCGCACACCAGCTTCGTCGGCCCCTTCGATGGGCCCTATCCCTTCTTCGA CGCCCAGAACCGTCTCGTCGGGGCGGACTGA
Upstream 100 bases:
>100_bases AGCCGCATCATCATCGAGGCGGCGGCCGAAACGGAGCTTTCCTTGGGGCAGGATGTCGGCGTCCGGCTTGATCCTTCCCG AATTGCAGTGGTGTAAGCGT
Downstream 100 bases:
>100_bases GCGGCGGGCGTCAGCCGCCCGGCGTATAGCCGCGCACGAAGCGGCTGAGCACGCGGGCGGCGGCGCCGATGTCCTCGGCG CTCGCATGTTCGCGGGGATT
Product: ICC protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MLIAQLTDTHIRLPGRLAYGVVDTAAYLERAVAYLRSLPRQPDVVIVTGDLTDFDTPEEYARFRAITAPLSMPLLPVPGN HDSSAGLRAAFPQIARQAGGGASDKLNYVVDGHPVRLVLLDSSVPGKPHGELGTATLAWLDAQLGAAPERPTLIGLHHPP FVTGIRHMDVQNLFDAAALEEVLLRHPQVLALTCGHIHRTVVTGFAGRPAMIAPSPAHAVSLALAPDAPPSFHMEPPAVA LHLFEGGRIVSHTSFVGPFDGPYPFFDAQNRLVGAD
Sequences:
>Translated_276_residues MLIAQLTDTHIRLPGRLAYGVVDTAAYLERAVAYLRSLPRQPDVVIVTGDLTDFDTPEEYARFRAITAPLSMPLLPVPGN HDSSAGLRAAFPQIARQAGGGASDKLNYVVDGHPVRLVLLDSSVPGKPHGELGTATLAWLDAQLGAAPERPTLIGLHHPP FVTGIRHMDVQNLFDAAALEEVLLRHPQVLALTCGHIHRTVVTGFAGRPAMIAPSPAHAVSLALAPDAPPSFHMEPPAVA LHLFEGGRIVSHTSFVGPFDGPYPFFDAQNRLVGAD >Mature_276_residues MLIAQLTDTHIRLPGRLAYGVVDTAAYLERAVAYLRSLPRQPDVVIVTGDLTDFDTPEEYARFRAITAPLSMPLLPVPGN HDSSAGLRAAFPQIARQAGGGASDKLNYVVDGHPVRLVLLDSSVPGKPHGELGTATLAWLDAQLGAAPERPTLIGLHHPP FVTGIRHMDVQNLFDAAALEEVLLRHPQVLALTCGHIHRTVVTGFAGRPAMIAPSPAHAVSLALAPDAPPSFHMEPPAVA LHLFEGGRIVSHTSFVGPFDGPYPFFDAQNRLVGAD
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli icc [H]
Homologues:
Organism=Escherichia coli, GI1789410, Length=232, Percent_Identity=33.1896551724138, Blast_Score=105, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 29438; Mature: 29438
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIAQLTDTHIRLPGRLAYGVVDTAAYLERAVAYLRSLPRQPDVVIVTGDLTDFDTPEEY CEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH ARFRAITAPLSMPLLPVPGNHDSSAGLRAAFPQIARQAGGGASDKLNYVVDGHPVRLVLL HHHHHEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEE DSSVPGKPHGELGTATLAWLDAQLGAAPERPTLIGLHHPPFVTGIRHMDVQNLFDAAALE ECCCCCCCCCCCCCHHHEEHHHHHCCCCCCCEEEEECCCCHHHCHHHCCHHHHHHHHHHH EVLLRHPQVLALTCGHIHRTVVTGFAGRPAMIAPSPAHAVSLALAPDAPPSFHMEPPAVA HHHHCCCCEEEEEHHHHHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCEEE LHLFEGGRIVSHTSFVGPFDGPYPFFDAQNRLVGAD EEEECCCEEEEECCCCCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure MLIAQLTDTHIRLPGRLAYGVVDTAAYLERAVAYLRSLPRQPDVVIVTGDLTDFDTPEEY CEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH ARFRAITAPLSMPLLPVPGNHDSSAGLRAAFPQIARQAGGGASDKLNYVVDGHPVRLVLL HHHHHEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEE DSSVPGKPHGELGTATLAWLDAQLGAAPERPTLIGLHHPPFVTGIRHMDVQNLFDAAALE ECCCCCCCCCCCCCHHHEEHHHHHCCCCCCCEEEEECCCCHHHCHHHCCHHHHHHHHHHH EVLLRHPQVLALTCGHIHRTVVTGFAGRPAMIAPSPAHAVSLALAPDAPPSFHMEPPAVA HHHHCCCCEEEEEHHHHHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCEEE LHLFEGGRIVSHTSFVGPFDGPYPFFDAQNRLVGAD EEEECCCEEEEECCCCCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]