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The map label for this gene is ygfU [H]

Identifier: 158422414

GI number: 158422414

Start: 891700

End: 893085

Strand: Direct

Name: ygfU [H]

Synonym: AZC_0790

Alternate gene names: 158422414

Gene position: 891700-893085 (Clockwise)

Preceding gene: 158422410

Following gene: 158422416

Centisome position: 16.61

GC content: 65.66

Gene sequence:

>1386_bases
ATGGCTGTGGATGCGGTCGATGAATTCTTACCGGCGCCGAAGATGGCGGCGCTGGGTTTGCAGCATGTTCTGGTGATGTA
TGCCGGGGCGGTCGCCGTGCCGCTCATCATCGGCCGGGCGCTCAAGCTTTCGCCTGAGGATGTCGCTTTTCTGATCAGCG
CCGACCTCTTCACCTGCGGACTGGTGACGCTGGTGCAGTGCATCGGCTTTCCCGGCGTCGGCATCCGCCTGCCGGTGATG
ATGGGCGTCACCTTTGCCTCCGTCGGCCCGATGATGACCATGGCGGCCACCGCCGACATCGGCCTCCTTGGGATTTATGG
TGCGGTGATCGCCTCCGGCATCTTCGCCATTCTCATCGCGCCCTTCATCTCCCGGATGCTGCCGCTGTTTCCGCCGGTGG
TGACGGGCACCATCATCCTCGTCATCGGCATCTCGCTCATGCGCGTGGGCATCAACTGGGCCGGCGGCGGCCTGCCCATG
CTGACCAAGGTGGTCAATGGCGAGGTCGTCACCGTGGCCAATCCCAATTACGGCCAGTTGCCGGGGCTCGGCCTCTCGCT
CTTCGTTCTCCTCGTCATCCTCGCGCTCATCCGCTGGGGCAAGGGCTTCGTGGCGAATGTGGCGGTGCTGCTCGGCATCG
TGGCGGGCGCGGTTCTCGCGAGCTTCACCGGCGTGATGCATTTCGAGAAGGTGGCGGCGGCGCCCTGGTTCGGGCTCGTG
TTGCCGCTGCATTTCGGCCTGCCGCATTTCTCGCTCGTGCCCATCGCCACCATGTGCATCGTGATGGTGGTGGTGATGAT
CGAGAGCCTCGGCATGTTCCTGGCGCTCGGCGAGATGACCGGCCGGACGGTGGACCAGAAGGCGCTGGCGCGGGGCCTCA
GGGCCGATGGTGTCGGCACGCTGCTGGGCGGCCTGTTCAACACCTTTCCCTACACCTCCTTCTCACAGAATGTCGGTCTC
GTGGGCGTCACGGGCGTCAAGTCGCGCTGGGTGACGGCGACCGGCGGCCTCATCATGCTGGCGCTCGGCCTGCTGCCGAA
GATGGCGGCGCTGGTGGAGGCGGTGCCGCAGGTGGTGCTGGGCGGGGCAGGCCTCGTCATGTTCGGCATGGTGGCCGCCA
CCGGCGCGCGGATCCTGACGGCTGTGGATTTCAAGACCAACCGCTTCAACCTCTTCATCGTCGCCATTTCGGTGGGCTTC
GGCATGATCCCGCTGGTGGCGCCGAACTTCTTCAAGGCACTGCCGCACGAGCTCCATCCGCTGCTGGAGTCCGGCATCCT
GCTCGCCGCCATTTCGGCGGTGGCGCTCAACGTCTTCTTCAACGGCATGAAGGGCGCCAGCCTCGACGAGGTGGTCGCTG
CCGCCAAGCAGGCGGACGCGCATTGA

Upstream 100 bases:

>100_bases
TGCCGTTTGATGGACGGCAAACGCGCGGGAGCCTCGGCTCCAAGACGCGGGCCTCAAGAAGAACAAACCTTTCAGATGCT
CACACAGGCTGGGGGACAGC

Downstream 100 bases:

>100_bases
GCGGGAGCGAAGGCCGGTGTTGTGCGGGCGGAGAGGGCTCTACCCCTCTCCCCAGCCCTCCCCCGCAAGGGGGGAGGGGG
CGCGTTGCATTGTCGTCAAT

Product: xanthine/uracil permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MAVDAVDEFLPAPKMAALGLQHVLVMYAGAVAVPLIIGRALKLSPEDVAFLISADLFTCGLVTLVQCIGFPGVGIRLPVM
MGVTFASVGPMMTMAATADIGLLGIYGAVIASGIFAILIAPFISRMLPLFPPVVTGTIILVIGISLMRVGINWAGGGLPM
LTKVVNGEVVTVANPNYGQLPGLGLSLFVLLVILALIRWGKGFVANVAVLLGIVAGAVLASFTGVMHFEKVAAAPWFGLV
LPLHFGLPHFSLVPIATMCIVMVVVMIESLGMFLALGEMTGRTVDQKALARGLRADGVGTLLGGLFNTFPYTSFSQNVGL
VGVTGVKSRWVTATGGLIMLALGLLPKMAALVEAVPQVVLGGAGLVMFGMVAATGARILTAVDFKTNRFNLFIVAISVGF
GMIPLVAPNFFKALPHELHPLLESGILLAAISAVALNVFFNGMKGASLDEVVAAAKQADAH

Sequences:

>Translated_461_residues
MAVDAVDEFLPAPKMAALGLQHVLVMYAGAVAVPLIIGRALKLSPEDVAFLISADLFTCGLVTLVQCIGFPGVGIRLPVM
MGVTFASVGPMMTMAATADIGLLGIYGAVIASGIFAILIAPFISRMLPLFPPVVTGTIILVIGISLMRVGINWAGGGLPM
LTKVVNGEVVTVANPNYGQLPGLGLSLFVLLVILALIRWGKGFVANVAVLLGIVAGAVLASFTGVMHFEKVAAAPWFGLV
LPLHFGLPHFSLVPIATMCIVMVVVMIESLGMFLALGEMTGRTVDQKALARGLRADGVGTLLGGLFNTFPYTSFSQNVGL
VGVTGVKSRWVTATGGLIMLALGLLPKMAALVEAVPQVVLGGAGLVMFGMVAATGARILTAVDFKTNRFNLFIVAISVGF
GMIPLVAPNFFKALPHELHPLLESGILLAAISAVALNVFFNGMKGASLDEVVAAAKQADAH
>Mature_460_residues
AVDAVDEFLPAPKMAALGLQHVLVMYAGAVAVPLIIGRALKLSPEDVAFLISADLFTCGLVTLVQCIGFPGVGIRLPVMM
GVTFASVGPMMTMAATADIGLLGIYGAVIASGIFAILIAPFISRMLPLFPPVVTGTIILVIGISLMRVGINWAGGGLPML
TKVVNGEVVTVANPNYGQLPGLGLSLFVLLVILALIRWGKGFVANVAVLLGIVAGAVLASFTGVMHFEKVAAAPWFGLVL
PLHFGLPHFSLVPIATMCIVMVVVMIESLGMFLALGEMTGRTVDQKALARGLRADGVGTLLGGLFNTFPYTSFSQNVGLV
GVTGVKSRWVTATGGLIMLALGLLPKMAALVEAVPQVVLGGAGLVMFGMVAATGARILTAVDFKTNRFNLFIVAISVGFG
MIPLVAPNFFKALPHELHPLLESGILLAAISAVALNVFFNGMKGASLDEVVAAAKQADAH

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Homo sapiens, GI44680148, Length=448, Percent_Identity=28.7946428571429, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI40316845, Length=448, Percent_Identity=28.7946428571429, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI44680145, Length=460, Percent_Identity=27.6086956521739, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI44680143, Length=465, Percent_Identity=27.3118279569892, Blast_Score=110, Evalue=2e-24,
Organism=Escherichia coli, GI87082181, Length=457, Percent_Identity=54.9234135667396, Blast_Score=471, Evalue=1e-134,
Organism=Escherichia coli, GI1790087, Length=448, Percent_Identity=29.6875, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI87082178, Length=457, Percent_Identity=26.6958424507659, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI87081818, Length=419, Percent_Identity=28.8782816229117, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1788843, Length=466, Percent_Identity=25.5364806866953, Blast_Score=109, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17558856, Length=474, Percent_Identity=24.2616033755274, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17542260, Length=188, Percent_Identity=27.1276595744681, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17541904, Length=442, Percent_Identity=22.6244343891403, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71993493, Length=184, Percent_Identity=26.6304347826087, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17542262, Length=185, Percent_Identity=27.5675675675676, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356175, Length=434, Percent_Identity=26.2672811059908, Blast_Score=105, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017588
- InterPro:   IPR006042
- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 47723; Mature: 47592

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVDAVDEFLPAPKMAALGLQHVLVMYAGAVAVPLIIGRALKLSPEDVAFLISADLFTCG
CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH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HHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]