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The map label for this gene is modB [H]

Identifier: 158422408

GI number: 158422408

Start: 885729

End: 886532

Strand: Direct

Name: modB [H]

Synonym: AZC_0784

Alternate gene names: 158422408

Gene position: 885729-886532 (Clockwise)

Preceding gene: 158422407

Following gene: 158422409

Centisome position: 16.49

GC content: 67.29

Gene sequence:

>804_bases
GTGAGGCCGATGAAACGCTCCCCTCTCGTTTTCGCCCTGCAACTCGTTATCACGCTGCTCGCCACGGCCTTCCTGGTGGT
GCCGGCGGGCACCTCCATCCTTGCGGGCGTCACCGTCAATTACTTTCAGGGCGTCCGCTCCGGGCTTACGCTGGAGTGGG
TGGCGCAGGTATGGGGCCTTTATGCGCCCACCATCTTCCGCTCCATCGCGCTGGCGCTTGGCACCCTCGTCGTCACGCTG
GCGCTGGGCGTGCCCTCCGCCTGGGCGCTGGCCCGCAAGCCCGGCCGCATGTCGCGCCTTGTGGAAGAGGTGGTGACGCT
GCCCGTCGCAATTCCCGGCCTCGCCCTCGCGCTGGCGCTCATCATCGCCTATGGCGGCATCCGCGAGTTCCGCGCCAGCA
TCCTGTTCATTCTCGTGGGCCACGTGCTCTACACGCTGCCCTTCATGCTGCGCTCGGTGATGGCGGTGCTCGCCGCCGTG
GACGTGCGCACGCTGGAAGAAGGGGCCGCGAGCCTCGGCGCCACGCCCTGGCAGCGCTTCATTCAGGTGGTGGTGCCCAA
TGCGCGGGGCGGCATCATCGCCGGCTCGCTCATGGTGGTCACGCTCTCCATCGGCGAGTTCAACCTCACCTGGATGCTGC
ACACGCCGCTGACCCAGACCCTGCCCGTGGGCCTTGCCGACAGCTACGCCTCCATGCGGCTCGAAATCGCCAGCGCCTAC
ACGCTGGTTTTCTTCATCATGATCGTGCCTTTGCTCGTGGCCATCCAGCTTCTGGGTGGCGAGCGGCGGGCCGCCAAGCG
CTGA

Upstream 100 bases:

>100_bases
TCGCCAGCGCGGCGGCGCTCTCCATCGCGCTCGGCCTCATCACCTGGCTGGTGCTGGCGGCGACACGCAATCTCGCGGGT
GACCGCGTGGCGGCGGCGGG

Downstream 100 bases:

>100_bases
GTGATCCCGTGACCGAGAAACAAGCGCCCACCGGCGCCGCCATCACCCTTGAAGCCTGCGGCAAGACCTTCGCCGACGGC
ACGCGGGCGCTGGAACCCGT

Product: permease

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRPMKRSPLVFALQLVITLLATAFLVVPAGTSILAGVTVNYFQGVRSGLTLEWVAQVWGLYAPTIFRSIALALGTLVVTL
ALGVPSAWALARKPGRMSRLVEEVVTLPVAIPGLALALALIIAYGGIREFRASILFILVGHVLYTLPFMLRSVMAVLAAV
DVRTLEEGAASLGATPWQRFIQVVVPNARGGIIAGSLMVVTLSIGEFNLTWMLHTPLTQTLPVGLADSYASMRLEIASAY
TLVFFIMIVPLLVAIQLLGGERRAAKR

Sequences:

>Translated_267_residues
MRPMKRSPLVFALQLVITLLATAFLVVPAGTSILAGVTVNYFQGVRSGLTLEWVAQVWGLYAPTIFRSIALALGTLVVTL
ALGVPSAWALARKPGRMSRLVEEVVTLPVAIPGLALALALIIAYGGIREFRASILFILVGHVLYTLPFMLRSVMAVLAAV
DVRTLEEGAASLGATPWQRFIQVVVPNARGGIIAGSLMVVTLSIGEFNLTWMLHTPLTQTLPVGLADSYASMRLEIASAY
TLVFFIMIVPLLVAIQLLGGERRAAKR
>Mature_267_residues
MRPMKRSPLVFALQLVITLLATAFLVVPAGTSILAGVTVNYFQGVRSGLTLEWVAQVWGLYAPTIFRSIALALGTLVVTL
ALGVPSAWALARKPGRMSRLVEEVVTLPVAIPGLALALALIIAYGGIREFRASILFILVGHVLYTLPFMLRSVMAVLAAV
DVRTLEEGAASLGATPWQRFIQVVVPNARGGIIAGSLMVVTLSIGEFNLTWMLHTPLTQTLPVGLADSYASMRLEIASAY
TLVFFIMIVPLLVAIQLLGGERRAAKR

Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787369, Length=164, Percent_Identity=29.8780487804878, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011867 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28663; Mature: 28663

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPMKRSPLVFALQLVITLLATAFLVVPAGTSILAGVTVNYFQGVRSGLTLEWVAQVWGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YAPTIFRSIALALGTLVVTLALGVPSAWALARKPGRMSRLVEEVVTLPVAIPGLALALAL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IIAYGGIREFRASILFILVGHVLYTLPFMLRSVMAVLAAVDVRTLEEGAASLGATPWQRF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IQVVVPNARGGIIAGSLMVVTLSIGEFNLTWMLHTPLTQTLPVGLADSYASMRLEIASAY
HHHHCCCCCCCEEECHHEEEEEEECCEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHH
TLVFFIMIVPLLVAIQLLGGERRAAKR
HHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MRPMKRSPLVFALQLVITLLATAFLVVPAGTSILAGVTVNYFQGVRSGLTLEWVAQVWGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YAPTIFRSIALALGTLVVTLALGVPSAWALARKPGRMSRLVEEVVTLPVAIPGLALALAL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IIAYGGIREFRASILFILVGHVLYTLPFMLRSVMAVLAAVDVRTLEEGAASLGATPWQRF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IQVVVPNARGGIIAGSLMVVTLSIGEFNLTWMLHTPLTQTLPVGLADSYASMRLEIASAY
HHHHCCCCCCCEEECHHEEEEEEECCEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHH
TLVFFIMIVPLLVAIQLLGGERRAAKR
HHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8491722 [H]