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The map label for this gene is yiaD [C]

Identifier: 158422404

GI number: 158422404

Start: 881736

End: 882335

Strand: Direct

Name: yiaD [C]

Synonym: AZC_0780

Alternate gene names: 158422404

Gene position: 881736-882335 (Clockwise)

Preceding gene: 158422403

Following gene: 158422405

Centisome position: 16.42

GC content: 67.5

Gene sequence:

>600_bases
ATGAAGTCGTTGATGCTCCGCGGCGCGCTCACGGCCGCCCTGCTCGTGTCCGCCGCCGCGCCTCTGGCCGCGCAGACGGA
CCTCTCCAACGCCCAGATCGTTCAGGGCCTGAACAATCTCACGCAGGACGCGCCGGTCGTCACCGCCGCCAGCCTGCGCC
AGGCGGCGCTCGATCACGCCACCATGTATTCCGGTCCGCCCTCGCAGCGCCCGCCGCTGGCGATCCAGCTCGACAAGCTG
GCGCAGATCAACGTGCAGATCCAGTTCAAGCTCAACTCGGCGATCATCCTGCCGGACAGCTACGCCACCATCGGCGCCAT
CGCCGACGCGCTGCACAATCCGGTGCTTCAGGGCTACCGTTTCATCGTGACGGGCAATACCGACACGACCGGCACGCGCG
AGCACAACCTCAAGCTCAGCCAGGAGCGCGCCGATGCGGTGGTGGAGGCGCTGACCACCACCTTCAACGTGAATCCGGCG
CGTCTTGAGGCCGTCGGCCTCGGCGAAGAGGCGTTGCAGGATACGAAGAATCCGGAATCGCCGGTGAACCGCCGGGTGCA
GATCTTCAACGTCGGGCCCCTGCCGCCCCGGCCGCGCTGA

Upstream 100 bases:

>100_bases
GCTTGGTCGATGCCAGCAAAGCGGTGAGCAAGGCCTGCAACCAGACCATCACCGACGCCGGCTGGCGCTGAGCGCAACCG
CAGAAAGAAGGACGACGCCC

Downstream 100 bases:

>100_bases
ACCAAATCCGGTTTCCGGCGTTTCACTCACATGACCTCACCTTGGCGCCGCCCCACCGGGCGGCGCCTTTTTCTTTGCCG
GGCAGGCATCGGCGCGTGTC

Product: OmpA family protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; OmpA/MotB; Outer Membrane Protein; OmpA Family Protein; Outer Membrane Protein OprF

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKSLMLRGALTAALLVSAAAPLAAQTDLSNAQIVQGLNNLTQDAPVVTAASLRQAALDHATMYSGPPSQRPPLAIQLDKL
AQINVQIQFKLNSAIILPDSYATIGAIADALHNPVLQGYRFIVTGNTDTTGTREHNLKLSQERADAVVEALTTTFNVNPA
RLEAVGLGEEALQDTKNPESPVNRRVQIFNVGPLPPRPR

Sequences:

>Translated_199_residues
MKSLMLRGALTAALLVSAAAPLAAQTDLSNAQIVQGLNNLTQDAPVVTAASLRQAALDHATMYSGPPSQRPPLAIQLDKL
AQINVQIQFKLNSAIILPDSYATIGAIADALHNPVLQGYRFIVTGNTDTTGTREHNLKLSQERADAVVEALTTTFNVNPA
RLEAVGLGEEALQDTKNPESPVNRRVQIFNVGPLPPRPR
>Mature_199_residues
MKSLMLRGALTAALLVSAAAPLAAQTDLSNAQIVQGLNNLTQDAPVVTAASLRQAALDHATMYSGPPSQRPPLAIQLDKL
AQINVQIQFKLNSAIILPDSYATIGAIADALHNPVLQGYRFIVTGNTDTTGTREHNLKLSQERADAVVEALTTTFNVNPA
RLEAVGLGEEALQDTKNPESPVNRRVQIFNVGPLPPRPR

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21230; Mature: 21230

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLMLRGALTAALLVSAAAPLAAQTDLSNAQIVQGLNNLTQDAPVVTAASLRQAALDHA
CCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TMYSGPPSQRPPLAIQLDKLAQINVQIQFKLNSAIILPDSYATIGAIADALHNPVLQGYR
HHCCCCCCCCCCEEEEECCEEEEEEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCEE
FIVTGNTDTTGTREHNLKLSQERADAVVEALTTTFNVNPARLEAVGLGEEALQDTKNPES
EEEECCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHCCCCCC
PVNRRVQIFNVGPLPPRPR
CCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MKSLMLRGALTAALLVSAAAPLAAQTDLSNAQIVQGLNNLTQDAPVVTAASLRQAALDHA
CCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TMYSGPPSQRPPLAIQLDKLAQINVQIQFKLNSAIILPDSYATIGAIADALHNPVLQGYR
HHCCCCCCCCCCEEEEECCEEEEEEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCEE
FIVTGNTDTTGTREHNLKLSQERADAVVEALTTTFNVNPARLEAVGLGEEALQDTKNPES
EEEECCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHCCCCCC
PVNRRVQIFNVGPLPPRPR
CCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA