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The map label for this gene is gntR [H]

Identifier: 158422394

GI number: 158422394

Start: 870845

End: 871672

Strand: Direct

Name: gntR [H]

Synonym: AZC_0770

Alternate gene names: 158422394

Gene position: 870845-871672 (Clockwise)

Preceding gene: 158422391

Following gene: 158422402

Centisome position: 16.22

GC content: 65.22

Gene sequence:

>828_bases
TTGACGCAGAACGGGTTCGTGAATATTTTCTGGGGCCCGTGCCGTGCCTTTAGGGCATGGCGTGCCGTCTTTCGGGTGGA
GTTGAGTCTTTTGAGGATGGATCCGCGGCGCCGCAGCGACAGCACGGAAAAAGGGGCTGCCGCCGCCAACGATGCCGCAG
CCCCCGTGTCTGCCGCGCCGGGTACCGTGACCATGCAGCTCTATCACCGCCTGCGGGAGGACATCATCCGCGGGGCGTTG
GCGCCGGGGCAGAAGCTGAAGATCGACGAGCTGTGCCGCAGCTATGAGGTCGGCTCCAGCCCGCTGCGGGAGGCGCTGAA
CCTGCTCACGTCATTCGGCTTCGTGGAGCGCCTCGAACAGCGCGGCTTTCAGGTGAAGCCCATCAGCGCGGATGAGTATG
ACGACATCGTCAGATGCCGCTGCTGGATCGAGGAACGGGCGCTCCGGGAAGCCATCGCCCACGGCGATGGCGCATGGGAG
GAAGATGTCACGCTGGCGCTCTTCCGGCTCGACAGGGCTGCGCGCGTCCGGCACGCCGCCATAGATCCCGAGTGGGAGAA
GCTGCACCACGCCTTTCACATGACGCTTCTGGCGCCCTGCGGCTCCAGCATCCTCATGGAATATTGCGAGCATCTGTTCA
CCCAGAGCATCCGCTACCGGCAGATCGCCGGTCTTCTGGAGCTGTCCGTGCGCGATCCGCAGGCGGAGCACGCCGAGATT
GCCAAGGCTGTTCTGGAGCGCGATGCCGATGCGGCGGTCGCCCTGCTATGCGCGCACTACCGCCGCACGCAGGATGCCCT
GAAGGAGAAGCTGTTCGCTGCCGGGTGA

Upstream 100 bases:

>100_bases
CTCGATGGCGCGACGACGGCAGGACAGGACTATATCGCTAAAAAATCTCTCAGACAGATTTTATGTATGAAACTGGCGCG
CTGCGCCATAAAAATATATA

Downstream 100 bases:

>100_bases
GCCGTGAGCGGAAGCGGCCGCAGGGGCGGCCACTTCGCGATTCCGAGCAGGGCAGAGGCGTCTGCCGCGCCTCGCCCCGC
CGGCGTCTTCAGTAGCCGAG

Product: regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTQNGFVNIFWGPCRAFRAWRAVFRVELSLLRMDPRRRSDSTEKGAAAANDAAAPVSAAPGTVTMQLYHRLREDIIRGAL
APGQKLKIDELCRSYEVGSSPLREALNLLTSFGFVERLEQRGFQVKPISADEYDDIVRCRCWIEERALREAIAHGDGAWE
EDVTLALFRLDRAARVRHAAIDPEWEKLHHAFHMTLLAPCGSSILMEYCEHLFTQSIRYRQIAGLLELSVRDPQAEHAEI
AKAVLERDADAAVALLCAHYRRTQDALKEKLFAAG

Sequences:

>Translated_275_residues
MTQNGFVNIFWGPCRAFRAWRAVFRVELSLLRMDPRRRSDSTEKGAAAANDAAAPVSAAPGTVTMQLYHRLREDIIRGAL
APGQKLKIDELCRSYEVGSSPLREALNLLTSFGFVERLEQRGFQVKPISADEYDDIVRCRCWIEERALREAIAHGDGAWE
EDVTLALFRLDRAARVRHAAIDPEWEKLHHAFHMTLLAPCGSSILMEYCEHLFTQSIRYRQIAGLLELSVRDPQAEHAEI
AKAVLERDADAAVALLCAHYRRTQDALKEKLFAAG
>Mature_274_residues
TQNGFVNIFWGPCRAFRAWRAVFRVELSLLRMDPRRRSDSTEKGAAAANDAAAPVSAAPGTVTMQLYHRLREDIIRGALA
PGQKLKIDELCRSYEVGSSPLREALNLLTSFGFVERLEQRGFQVKPISADEYDDIVRCRCWIEERALREAIAHGDGAWEE
DVTLALFRLDRAARVRHAAIDPEWEKLHHAFHMTLLAPCGSSILMEYCEHLFTQSIRYRQIAGLLELSVRDPQAEHAEIA
KAVLERDADAAVALLCAHYRRTQDALKEKLFAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082149, Length=198, Percent_Identity=35.3535353535354, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 31044; Mature: 30913

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNGFVNIFWGPCRAFRAWRAVFRVELSLLRMDPRRRSDSTEKGAAAANDAAAPVSAAP
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTVTMQLYHRLREDIIRGALAPGQKLKIDELCRSYEVGSSPLREALNLLTSFGFVERLEQ
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RGFQVKPISADEYDDIVRCRCWIEERALREAIAHGDGAWEEDVTLALFRLDRAARVRHAA
CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
IDPEWEKLHHAFHMTLLAPCGSSILMEYCEHLFTQSIRYRQIAGLLELSVRDPQAEHAEI
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AKAVLERDADAAVALLCAHYRRTQDALKEKLFAAG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQNGFVNIFWGPCRAFRAWRAVFRVELSLLRMDPRRRSDSTEKGAAAANDAAAPVSAAP
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTVTMQLYHRLREDIIRGALAPGQKLKIDELCRSYEVGSSPLREALNLLTSFGFVERLEQ
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RGFQVKPISADEYDDIVRCRCWIEERALREAIAHGDGAWEEDVTLALFRLDRAARVRHAA
CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
IDPEWEKLHHAFHMTLLAPCGSSILMEYCEHLFTQSIRYRQIAGLLELSVRDPQAEHAEI
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AKAVLERDADAAVALLCAHYRRTQDALKEKLFAAG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]