| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is attM
Identifier: 158422391
GI number: 158422391
Start: 867360
End: 868151
Strand: Direct
Name: attM
Synonym: AZC_0767
Alternate gene names: 158422391
Gene position: 867360-868151 (Clockwise)
Preceding gene: 158422390
Following gene: 158422394
Centisome position: 16.15
GC content: 64.39
Gene sequence:
>792_bases ATGACCGACATCCGCCTCTATATGCTTCAGTCTGGCTCGCTGAAGTGCAAGGTTCACAACATCAAGATGAACCAGGGCAA CGGCGCGGACTATGAGATCCCGGTGCCCTTCTTCCTCATCACCCACCCCAAGGGCCACACCATCATCGATGGCGGCAATG CGGTGGAAGTCGCCACCGACCCGCGCGGACACTGGGGCGGCGTCTGCGACGTCTACTGGCCGGTGATGCGCGAGGACGAG GGCTGCGTGGCGCAGGTGAAGGCGCTCGGCATCGATCCGGCGGATGTGAAGTATGTGGTGCAGTCGCACCTGCATCTCGA CCACACCGGCGCCATCGGCCGCTTCCCGAACGCCACGCACATCGTGCAGCGGCGCGAATACGAATACGCCTTCACGCCGG ACTGGTTCGCCGGCGGCGGCTATATCCGCAAGGATTTCGATCGTCCCGGCCTGCGCTGGCAGTTCCTGAACGCCGACGTG GATGACTATTACGACATCTATGGTGACGGCACGCTCACCACGGTCTTCTCGCCCGGCCATGCACCGGGGCACCAGTCCTT CCTGGTGCGCCTGCCGAAGTCCGGCCCGCTGCTGCTGACCATCGACGCCGCCTATACGCTGGATCATTGGAACGAGCAGG CCCTGCCCGGCTTCCTCGCCTCCACCGTCGATACGGTGCGTTCGGTGCAGAAGCTGCGTACGCTGGCCGAGCGCACCGGC GCGCAGGTCGTGACGGGCCATGATCCGGATGCCTGGCCGTCCTTCAAGAAGGCCCCCGGCTATTACGACTGA
Upstream 100 bases:
>100_bases GGCGCCGGCGCGCGGCGCCGGTGCCTTCTCTCCCTCTCGGACAATCGAAATCCCCCCGCATTGGCCGCGTGCCGGTGACG GGGGACCATTGGAGGAAACC
Downstream 100 bases:
>100_bases GCCTCCGGTGGCCCATCGCGGCTACCAATTCGACCGCAAGACATAAAAAGCCGGGACGGTCAGCGCCGTCCCGGCTTTCC TTTTACGTGGGAGCCTCGTT
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: AHL-lactonase AttM
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTDIRLYMLQSGSLKCKVHNIKMNQGNGADYEIPVPFFLITHPKGHTIIDGGNAVEVATDPRGHWGGVCDVYWPVMREDE GCVAQVKALGIDPADVKYVVQSHLHLDHTGAIGRFPNATHIVQRREYEYAFTPDWFAGGGYIRKDFDRPGLRWQFLNADV DDYYDIYGDGTLTTVFSPGHAPGHQSFLVRLPKSGPLLLTIDAAYTLDHWNEQALPGFLASTVDTVRSVQKLRTLAERTG AQVVTGHDPDAWPSFKKAPGYYD
Sequences:
>Translated_263_residues MTDIRLYMLQSGSLKCKVHNIKMNQGNGADYEIPVPFFLITHPKGHTIIDGGNAVEVATDPRGHWGGVCDVYWPVMREDE GCVAQVKALGIDPADVKYVVQSHLHLDHTGAIGRFPNATHIVQRREYEYAFTPDWFAGGGYIRKDFDRPGLRWQFLNADV DDYYDIYGDGTLTTVFSPGHAPGHQSFLVRLPKSGPLLLTIDAAYTLDHWNEQALPGFLASTVDTVRSVQKLRTLAERTG AQVVTGHDPDAWPSFKKAPGYYD >Mature_262_residues TDIRLYMLQSGSLKCKVHNIKMNQGNGADYEIPVPFFLITHPKGHTIIDGGNAVEVATDPRGHWGGVCDVYWPVMREDEG CVAQVKALGIDPADVKYVVQSHLHLDHTGAIGRFPNATHIVQRREYEYAFTPDWFAGGGYIRKDFDRPGLRWQFLNADVD DYYDIYGDGTLTTVFSPGHAPGHQSFLVRLPKSGPLLLTIDAAYTLDHWNEQALPGFLASTVDTVRSVQKLRTLAERTGA QVVTGHDPDAWPSFKKAPGYYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AHLLM_AZOC5 (A8IQD2)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001523683.1 - ProteinModelPortal: A8IQD2 - SMR: A8IQD2 - GeneID: 5691974 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_0767 - HOGENOM: HBG294123 - OMA: IDAAYTL - ProtClustDB: CLSK923439 - BioCyc: ACAU438753:AZC_0767-MONOMER - InterPro: IPR001279 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: =3.1.1.81
Molecular weight: Translated: 29317; Mature: 29186
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIRLYMLQSGSLKCKVHNIKMNQGNGADYEIPVPFFLITHPKGHTIIDGGNAVEVATD CCCEEEEEEECCCEEEEEEEEEEECCCCCCEEECCCEEEEECCCCCEEEECCCEEEEEEC PRGHWGGVCDVYWPVMREDEGCVAQVKALGIDPADVKYVVQSHLHLDHTGAIGRFPNATH CCCCCCCEEEEECCEEECCCCCEEEHEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH IVQRREYEYAFTPDWFAGGGYIRKDFDRPGLRWQFLNADVDDYYDIYGDGTLTTVFSPGH HHHHCCCCEEECCCCCCCCCEEEECCCCCCCEEEEECCCCCHHEEEECCCEEEEEECCCC APGHQSFLVRLPKSGPLLLTIDAAYTLDHWNEQALPGFLASTVDTVRSVQKLRTLAERTG CCCCCEEEEECCCCCCEEEEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC AQVVTGHDPDAWPSFKKAPGYYD CEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDIRLYMLQSGSLKCKVHNIKMNQGNGADYEIPVPFFLITHPKGHTIIDGGNAVEVATD CCEEEEEEECCCEEEEEEEEEEECCCCCCEEECCCEEEEECCCCCEEEECCCEEEEEEC PRGHWGGVCDVYWPVMREDEGCVAQVKALGIDPADVKYVVQSHLHLDHTGAIGRFPNATH CCCCCCCEEEEECCEEECCCCCEEEHEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH IVQRREYEYAFTPDWFAGGGYIRKDFDRPGLRWQFLNADVDDYYDIYGDGTLTTVFSPGH HHHHCCCCEEECCCCCCCCCEEEECCCCCCCEEEEECCCCCHHEEEECCCEEEEEECCCC APGHQSFLVRLPKSGPLLLTIDAAYTLDHWNEQALPGFLASTVDTVRSVQKLRTLAERTG CCCCCEEEEECCCCCCEEEEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC AQVVTGHDPDAWPSFKKAPGYYD CEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA