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The map label for this gene is yrbH [C]

Identifier: 158422330

GI number: 158422330

Start: 785160

End: 786224

Strand: Direct

Name: yrbH [C]

Synonym: AZC_0706

Alternate gene names: 158422330

Gene position: 785160-786224 (Clockwise)

Preceding gene: 158422329

Following gene: 158422331

Centisome position: 14.62

GC content: 70.14

Gene sequence:

>1065_bases
ATGTCGGGCCGGAAACTCCCCTTGGCCGGCGAACAGTGCTATGGCCTCGCCATGACTGCCGCTCCCTCGACGAAAGTCGA
CACATCCGTGACCGAGACCCGTTCCCCGGCCATCGCCTCCGCTCTGTCCACCCTTGAGACCGAGGCGGCGGGCCTTGCCG
CGCTGATCGCCGCCGTGGGCAACGGCCTCGGCGAGGCGTTCGAGGCGGCGGTCGCGACCATCCTCGGGGCCAAGGGTCGG
GTGATCGTCACAGGCATGGGCAAGAGCGGGCATGTGGCGCGCAAGATCGCCGCGACGCTCGCCTCCACCGGCACCCCGGC
CCATTACGTCCATCCCGCTGAGGCAAGCCACGGCGACCTCGGCATGGTGGCGCCGGAAGACGTCATCATTGGCCTGTCCT
GGTCCGGCGAGACGGCGGAACTGCGCGACATTGTGGACTATGCGCTGCGGTTCGACGTGCCGCTCATCGCCATCACCTCC
AATCGCGAGAGCGCGCTCGCCCGCGCCGCCCGCGTGGTGCTGGCACTGCCGCTGTCGCCGGAAGCCTGCCCGCTCGGCCT
TGCGCCCACCACCTCCACGCTGATGCAGCTCGCCATGGGCGATGCGCTCGCTGTCGCCTTGCTGGAGAGCCGTGGCTTCA
CTGCCAAGGATTTCCGCACCTTCCATCCCGGCGGCAAGCTGGGCGCCAACCTCAAGTTCGTGCGGGACGTGATGCGCGCC
GGCGAGGCGCTGCCGCTCGCCCGGTCGGGCGCGCTCATGGGCGAGGTGCTGGTGGAGATGAGCGCCAAGGGCCTCGGCTG
CGTCGCCGTGCTCGATGGCGATGGCCGGCTGGCCGGGATCGTGACCGATGGCGACCTGCGCCGCCACATGGCGAACGACC
TGCCGTCCCGGCCGGTGGACGCCATCATGAGCCGCAGCCCGAAGACGATCCGGCCGGACCAGATGGTCTCCGAAGCCCTG
CGGCTGCTCAACACGGCGAAGATCACCGCCCTCATGGTGGTGGAGGACGGCCGCCCGGTGGGCGCCATCCACATCCACGA
CCTGCTCCACGTGGGCGTGGCCTGA

Upstream 100 bases:

>100_bases
CCGCGCACTGCCCGTGGAAGGCTTCCTTGAGAAATACGAGCGGCGGGCGGTCTCCGCCGCGGAGTGAGGTGGCGCGGCCA
TCCGCTGGCGCCGGGGGGAT

Downstream 100 bases:

>100_bases
GGTTTTGTTGGGGGGCGGGACGGAGGCGGCGCTCTGGCGGCGGCCGTTCTACCCCCCTCCCAACCCTCCCCCGCAAGGGG
GGAGGGCTTTTCTGCTCAAG

Product: sugar isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSGRKLPLAGEQCYGLAMTAAPSTKVDTSVTETRSPAIASALSTLETEAAGLAALIAAVGNGLGEAFEAAVATILGAKGR
VIVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDLGMVAPEDVIIGLSWSGETAELRDIVDYALRFDVPLIAITS
NRESALARAARVVLALPLSPEACPLGLAPTTSTLMQLAMGDALAVALLESRGFTAKDFRTFHPGGKLGANLKFVRDVMRA
GEALPLARSGALMGEVLVEMSAKGLGCVAVLDGDGRLAGIVTDGDLRRHMANDLPSRPVDAIMSRSPKTIRPDQMVSEAL
RLLNTAKITALMVVEDGRPVGAIHIHDLLHVGVA

Sequences:

>Translated_354_residues
MSGRKLPLAGEQCYGLAMTAAPSTKVDTSVTETRSPAIASALSTLETEAAGLAALIAAVGNGLGEAFEAAVATILGAKGR
VIVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDLGMVAPEDVIIGLSWSGETAELRDIVDYALRFDVPLIAITS
NRESALARAARVVLALPLSPEACPLGLAPTTSTLMQLAMGDALAVALLESRGFTAKDFRTFHPGGKLGANLKFVRDVMRA
GEALPLARSGALMGEVLVEMSAKGLGCVAVLDGDGRLAGIVTDGDLRRHMANDLPSRPVDAIMSRSPKTIRPDQMVSEAL
RLLNTAKITALMVVEDGRPVGAIHIHDLLHVGVA
>Mature_353_residues
SGRKLPLAGEQCYGLAMTAAPSTKVDTSVTETRSPAIASALSTLETEAAGLAALIAAVGNGLGEAFEAAVATILGAKGRV
IVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDLGMVAPEDVIIGLSWSGETAELRDIVDYALRFDVPLIAITSN
RESALARAARVVLALPLSPEACPLGLAPTTSTLMQLAMGDALAVALLESRGFTAKDFRTFHPGGKLGANLKFVRDVMRAG
EALPLARSGALMGEVLVEMSAKGLGCVAVLDGDGRLAGIVTDGDLRRHMANDLPSRPVDAIMSRSPKTIRPDQMVSEALR
LLNTAKITALMVVEDGRPVGAIHIHDLLHVGVA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=301, Percent_Identity=46.5116279069767, Blast_Score=265, Evalue=3e-72,
Organism=Escherichia coli, GI87082151, Length=294, Percent_Identity=43.8775510204082, Blast_Score=222, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 36541; Mature: 36410

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRKLPLAGEQCYGLAMTAAPSTKVDTSVTETRSPAIASALSTLETEAAGLAALIAAVG
CCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NGLGEAFEAAVATILGAKGRVIVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDL
CCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
GMVAPEDVIIGLSWSGETAELRDIVDYALRFDVPLIAITSNRESALARAARVVLALPLSP
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHEEEEECCCC
EACPLGLAPTTSTLMQLAMGDALAVALLESRGFTAKDFRTFHPGGKLGANLKFVRDVMRA
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHCEEECCCCCCCCCHHHHHHHHHC
GEALPLARSGALMGEVLVEMSAKGLGCVAVLDGDGRLAGIVTDGDLRRHMANDLPSRPVD
CCCCCCHHCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECHHHHHHHHHCCCCCCHH
AIMSRSPKTIRPDQMVSEALRLLNTAKITALMVVEDGRPVGAIHIHDLLHVGVA
HHHCCCCCCCCHHHHHHHHHHHHHHCEEEEEEEEECCCCEEEEEHHHHHHHCCC
>Mature Secondary Structure 
SGRKLPLAGEQCYGLAMTAAPSTKVDTSVTETRSPAIASALSTLETEAAGLAALIAAVG
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NGLGEAFEAAVATILGAKGRVIVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDL
CCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
GMVAPEDVIIGLSWSGETAELRDIVDYALRFDVPLIAITSNRESALARAARVVLALPLSP
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHEEEEECCCC
EACPLGLAPTTSTLMQLAMGDALAVALLESRGFTAKDFRTFHPGGKLGANLKFVRDVMRA
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHCEEECCCCCCCCCHHHHHHHHHC
GEALPLARSGALMGEVLVEMSAKGLGCVAVLDGDGRLAGIVTDGDLRRHMANDLPSRPVD
CCCCCCHHCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECHHHHHHHHHCCCCCCHH
AIMSRSPKTIRPDQMVSEALRLLNTAKITALMVVEDGRPVGAIHIHDLLHVGVA
HHHCCCCCCCCHHHHHHHHHHHHHHCEEEEEEEEECCCCEEEEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]