| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422328
Identifier: 158422328
GI number: 158422328
Start: 783685
End: 784380
Strand: Direct
Name: 158422328
Synonym: AZC_0704
Alternate gene names: NA
Gene position: 783685-784380 (Clockwise)
Preceding gene: 158422327
Following gene: 158422329
Centisome position: 14.59
GC content: 71.12
Gene sequence:
>696_bases GTGTCCGTTCGCTATGCCATCTATCTCGCGCCGCCCCCAGACAGCGCCTTGTGGCGCTTCGGCTCGTCCGTGGTCGGCTA TGATGCGGAGACGGGCGAGGACATCGCCCCGGCCGCCCTTGCCGGCTTCACGCCGGAGGAATGGTTCGAGCAGACCCACG AGCCCCGCCGCTACGGCTTCCACGGCACGCTGAAGGCGCCCTTCCGGCTGGCGGAGGGCGCGGACGAGACCGACCTCTTC GCCGCGCTCGCGCGCTTTGCGGCCGGGCATCACCCCTTCGAGCTGCCGCCGCTGGAGGTCCGCCAGATCGGCACCTTCAT CGCCCTCGTGCCGCCGGCGCCGGTTCCGGCGCTGGAGGATCTGGCGGCGGATGCGGTGGAGGAACTGGACGCCTTGCGGG CGCCGCTCAGCGAAGCGGAGATCGCCCGCCGCAAGCCGGAGCGTCTCTCGGCGCGCCAGCTCGCCTATCTGCACCGCTAC GGTTACCCTTATGTGCGGGAGGAATTCCGCTTCCACATGACACTCTCCTCCGCTCTGGCGGAGCCGGCGCTGGGCCGGGC CACGCAGGCGCTGTGTGACGCTTATGCGGCCAGCGGGGCGCACCTGCCCGTCAAGGTGGAGGATGCGGCGCTCTATGTGC AGGAGGCGCCGGGCATGCGCTTCCGCATCCTTCACCGCGCGCCGCTGGGCGCCTGA
Upstream 100 bases:
>100_bases TGCAGGTGGAAGGCGCCCGGGTGTTCTGAGGCTGCCTGCCTTCCCTCCGGCCCGGCCGGCCGTTAAGCAGAAAAGACGCC TTTGTCCGGGGAGCCGCAGC
Downstream 100 bases:
>100_bases GCCGGGGCTTCGAGGCGCGAACGTGGCGGCAGTCCGCCCGGGCCGTCGGACCGTCGTACGGCTGTCATCGGGGCGTCGCA TTTTCCGCCGCCTCCGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSVRYAIYLAPPPDSALWRFGSSVVGYDAETGEDIAPAALAGFTPEEWFEQTHEPRRYGFHGTLKAPFRLAEGADETDLF AALARFAAGHHPFELPPLEVRQIGTFIALVPPAPVPALEDLAADAVEELDALRAPLSEAEIARRKPERLSARQLAYLHRY GYPYVREEFRFHMTLSSALAEPALGRATQALCDAYAASGAHLPVKVEDAALYVQEAPGMRFRILHRAPLGA
Sequences:
>Translated_231_residues MSVRYAIYLAPPPDSALWRFGSSVVGYDAETGEDIAPAALAGFTPEEWFEQTHEPRRYGFHGTLKAPFRLAEGADETDLF AALARFAAGHHPFELPPLEVRQIGTFIALVPPAPVPALEDLAADAVEELDALRAPLSEAEIARRKPERLSARQLAYLHRY GYPYVREEFRFHMTLSSALAEPALGRATQALCDAYAASGAHLPVKVEDAALYVQEAPGMRFRILHRAPLGA >Mature_230_residues SVRYAIYLAPPPDSALWRFGSSVVGYDAETGEDIAPAALAGFTPEEWFEQTHEPRRYGFHGTLKAPFRLAEGADETDLFA ALARFAAGHHPFELPPLEVRQIGTFIALVPPAPVPALEDLAADAVEELDALRAPLSEAEIARRKPERLSARQLAYLHRYG YPYVREEFRFHMTLSSALAEPALGRATQALCDAYAASGAHLPVKVEDAALYVQEAPGMRFRILHRAPLGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25365; Mature: 25234
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRYAIYLAPPPDSALWRFGSSVVGYDAETGEDIAPAALAGFTPEEWFEQTHEPRRYGF CCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHCCCCHHCCC HGTLKAPFRLAEGADETDLFAALARFAAGHHPFELPPLEVRQIGTFIALVPPAPVPALED CCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEECCCCCCCHHHH LAADAVEELDALRAPLSEAEIARRKPERLSARQLAYLHRYGYPYVREEFRFHMTLSSALA HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC EPALGRATQALCDAYAASGAHLPVKVEDAALYVQEAPGMRFRILHRAPLGA CCHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCEEEEEECCCCCC >Mature Secondary Structure SVRYAIYLAPPPDSALWRFGSSVVGYDAETGEDIAPAALAGFTPEEWFEQTHEPRRYGF CEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHCCCCHHCCC HGTLKAPFRLAEGADETDLFAALARFAAGHHPFELPPLEVRQIGTFIALVPPAPVPALED CCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEECCCCCCCHHHH LAADAVEELDALRAPLSEAEIARRKPERLSARQLAYLHRYGYPYVREEFRFHMTLSSALA HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC EPALGRATQALCDAYAASGAHLPVKVEDAALYVQEAPGMRFRILHRAPLGA CCHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA