| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158422326
Identifier: 158422326
GI number: 158422326
Start: 780724
End: 782289
Strand: Direct
Name: 158422326
Synonym: AZC_0702
Alternate gene names: NA
Gene position: 780724-782289 (Clockwise)
Preceding gene: 158422322
Following gene: 158422327
Centisome position: 14.54
GC content: 64.94
Gene sequence:
>1566_bases ATGTCGCCCAAAGCTCCGCTTCCTCCCCGCCGGGCCCTCGATCTGTCGCCGCGCCTGATCCTGCTGCTGTCGCTCGTCTG CTTCGTGCTCGTGGCGATCCCCATCGTCACCCACCCGCTGCCGCCGCTGTCCGACTATGTGAATCATCTGGCGCGGATGA AGGTGATCGCGACCCCGAAGGATTCGGACCTCGCGCGCTTCTATTTCCTGGAATGGAGCGTCCTGCCCAACCTGATGATG GACATGGTGGTCCCGCTGCTGGACCGCTTTGCCGACATCTATGTGGCCGGCGAGATGTACACGCTGATGTGCTTCGCGCT CATCATCTTCGGCACCATGTACCTCCACCGGGCGCTGTTCGGGAGCTGGTCGGCCATCCCGCTGGTGGCCTTCCCGCTGC TCTACAACAACATTTTCCTCATCGGGGTGATGAACTACATCTTCGGCATCGGCCTGTGCCTGTGCGGCCTCGCCAGCTGG GTGATGCTGCGGGACAAGCCCTGGCCGTGGCGCTATGCGGTCTCCTGCCTGTTCGTCCTCGCCCTGTTCTTCTGCCACCT CTTCGCGACCGGCGTGTATGGCGTCGGCATCCTCTCCTATGAGCTGATGCGACTGTTCGACCGCAAGGGCGGGGCACTCA AGGGCCGGCTGGTGGCGTTCGTCACGGCGGGCTTTCCCTTCGCGCTCACGGTGCCGCTGCTGCTGATGAGCCCCACCTGG GGCCTCAAGGGGGAGAATTACTGGGAGCCGCGCGGCAAGATCGACGGGCTCGAGTTCGTCATCAACGTCTATTACGACTT CGTCGCCTTCGCGCTCACCGCCGTCATCGTGCTGGCGGCGGCCTGGGCGGTGCGGCACCGGCTGCTGCGCACCCACACCT TCCTGTTCTTCCTGCTGGTGATCGCGGGGGCGGTCTATCTCGCCCTGCCGCGCACAGTCTTCGCCACCTACATGGCCGAC CAGCGCATGCCGGTCGCCATCGCCTTCATGGTCATCGCCTCCATACAGATCGACCTGCGCCACCGCCTCGCCCAGCGCGG CTTTGCGGTGATGCTGGTGCTGCTGGTGGCGGTCCGCGTCACCGAAGTGCAGATGGTGTGGAACAACCTCACGCAATGGA CGGTGGCGTTCCATGACTCCATCGCCAAGATCAAGCGCGGCTCCAAGGTGCTGGTGGCCTATGCCGACCCGTGGGGCGGC TCGGCTGCGACCGACCTCGGTCTTGTCCATGCGGCCTGCCTTGCCATCATCGAGCGCTCCTCGCTGGTGACGACCGCCTT CACGGTGCCGGGCAAGCAGATCCTGCGCGTGCACAAGCCCTATACGGACTGGGTGGACACCGAGGACGGCACCCCGCCCA GCGTCGAGCAGCTTCTGGTAACTGAGGAAGACGGCACCCCTGGCGGCCCGCGCTACTGGGATTACTGGCCGCAGCATTTC GACTATGTCTATCTGCTGTTCACCGAGCCGGGCGACCCCAATCCCGATCCGGACCGGCTCGAGCTCGTCTATGCGGGCGA CCGCTTCCAGCTTTACAAGGTCATCCCGCCCGCGCCGCTCCACTAG
Upstream 100 bases:
>100_bases AGGCGCACAGCCACGGAACCACCACAATAAAGCCCTTGCACTGGCCTCAGAGCCGGTTAATGCCCTGCTGGAATTTCCCC GCCTGATTTCCCGAAGGCCC
Downstream 100 bases:
>100_bases AGCACGCGCAGTCAGATTGCGTCGCAATCTGACGGGATCACGCGTTCTGTTTCATGAGTTTAGAGGGCGATTCACCGAGC GGATTGGTTCGCTCCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MSPKAPLPPRRALDLSPRLILLLSLVCFVLVAIPIVTHPLPPLSDYVNHLARMKVIATPKDSDLARFYFLEWSVLPNLMM DMVVPLLDRFADIYVAGEMYTLMCFALIIFGTMYLHRALFGSWSAIPLVAFPLLYNNIFLIGVMNYIFGIGLCLCGLASW VMLRDKPWPWRYAVSCLFVLALFFCHLFATGVYGVGILSYELMRLFDRKGGALKGRLVAFVTAGFPFALTVPLLLMSPTW GLKGENYWEPRGKIDGLEFVINVYYDFVAFALTAVIVLAAAWAVRHRLLRTHTFLFFLLVIAGAVYLALPRTVFATYMAD QRMPVAIAFMVIASIQIDLRHRLAQRGFAVMLVLLVAVRVTEVQMVWNNLTQWTVAFHDSIAKIKRGSKVLVAYADPWGG SAATDLGLVHAACLAIIERSSLVTTAFTVPGKQILRVHKPYTDWVDTEDGTPPSVEQLLVTEEDGTPGGPRYWDYWPQHF DYVYLLFTEPGDPNPDPDRLELVYAGDRFQLYKVIPPAPLH
Sequences:
>Translated_521_residues MSPKAPLPPRRALDLSPRLILLLSLVCFVLVAIPIVTHPLPPLSDYVNHLARMKVIATPKDSDLARFYFLEWSVLPNLMM DMVVPLLDRFADIYVAGEMYTLMCFALIIFGTMYLHRALFGSWSAIPLVAFPLLYNNIFLIGVMNYIFGIGLCLCGLASW VMLRDKPWPWRYAVSCLFVLALFFCHLFATGVYGVGILSYELMRLFDRKGGALKGRLVAFVTAGFPFALTVPLLLMSPTW GLKGENYWEPRGKIDGLEFVINVYYDFVAFALTAVIVLAAAWAVRHRLLRTHTFLFFLLVIAGAVYLALPRTVFATYMAD QRMPVAIAFMVIASIQIDLRHRLAQRGFAVMLVLLVAVRVTEVQMVWNNLTQWTVAFHDSIAKIKRGSKVLVAYADPWGG SAATDLGLVHAACLAIIERSSLVTTAFTVPGKQILRVHKPYTDWVDTEDGTPPSVEQLLVTEEDGTPGGPRYWDYWPQHF DYVYLLFTEPGDPNPDPDRLELVYAGDRFQLYKVIPPAPLH >Mature_520_residues SPKAPLPPRRALDLSPRLILLLSLVCFVLVAIPIVTHPLPPLSDYVNHLARMKVIATPKDSDLARFYFLEWSVLPNLMMD MVVPLLDRFADIYVAGEMYTLMCFALIIFGTMYLHRALFGSWSAIPLVAFPLLYNNIFLIGVMNYIFGIGLCLCGLASWV MLRDKPWPWRYAVSCLFVLALFFCHLFATGVYGVGILSYELMRLFDRKGGALKGRLVAFVTAGFPFALTVPLLLMSPTWG LKGENYWEPRGKIDGLEFVINVYYDFVAFALTAVIVLAAAWAVRHRLLRTHTFLFFLLVIAGAVYLALPRTVFATYMADQ RMPVAIAFMVIASIQIDLRHRLAQRGFAVMLVLLVAVRVTEVQMVWNNLTQWTVAFHDSIAKIKRGSKVLVAYADPWGGS AATDLGLVHAACLAIIERSSLVTTAFTVPGKQILRVHKPYTDWVDTEDGTPPSVEQLLVTEEDGTPGGPRYWDYWPQHFD YVYLLFTEPGDPNPDPDRLELVYAGDRFQLYKVIPPAPLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58632; Mature: 58501
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKAPLPPRRALDLSPRLILLLSLVCFVLVAIPIVTHPLPPLSDYVNHLARMKVIATPK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCC DSDLARFYFLEWSVLPNLMMDMVVPLLDRFADIYVAGEMYTLMCFALIIFGTMYLHRALF CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GSWSAIPLVAFPLLYNNIFLIGVMNYIFGIGLCLCGLASWVMLRDKPWPWRYAVSCLFVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ALFFCHLFATGVYGVGILSYELMRLFDRKGGALKGRLVAFVTAGFPFALTVPLLLMSPTW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCC GLKGENYWEPRGKIDGLEFVINVYYDFVAFALTAVIVLAAAWAVRHRLLRTHTFLFFLLV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGAVYLALPRTVFATYMADQRMPVAIAFMVIASIQIDLRHRLAQRGFAVMLVLLVAVRV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TEVQMVWNNLTQWTVAFHDSIAKIKRGSKVLVAYADPWGGSAATDLGLVHAACLAIIERS HHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC SLVTTAFTVPGKQILRVHKPYTDWVDTEDGTPPSVEQLLVTEEDGTPGGPRYWDYWPQHF CCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCC DYVYLLFTEPGDPNPDPDRLELVYAGDRFQLYKVIPPAPLH CEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCC >Mature Secondary Structure SPKAPLPPRRALDLSPRLILLLSLVCFVLVAIPIVTHPLPPLSDYVNHLARMKVIATPK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCC DSDLARFYFLEWSVLPNLMMDMVVPLLDRFADIYVAGEMYTLMCFALIIFGTMYLHRALF CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GSWSAIPLVAFPLLYNNIFLIGVMNYIFGIGLCLCGLASWVMLRDKPWPWRYAVSCLFVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ALFFCHLFATGVYGVGILSYELMRLFDRKGGALKGRLVAFVTAGFPFALTVPLLLMSPTW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCC GLKGENYWEPRGKIDGLEFVINVYYDFVAFALTAVIVLAAAWAVRHRLLRTHTFLFFLLV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGAVYLALPRTVFATYMADQRMPVAIAFMVIASIQIDLRHRLAQRGFAVMLVLLVAVRV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TEVQMVWNNLTQWTVAFHDSIAKIKRGSKVLVAYADPWGGSAATDLGLVHAACLAIIERS HHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC SLVTTAFTVPGKQILRVHKPYTDWVDTEDGTPPSVEQLLVTEEDGTPGGPRYWDYWPQHF CCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCC DYVYLLFTEPGDPNPDPDRLELVYAGDRFQLYKVIPPAPLH CEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA