| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422322
Identifier: 158422322
GI number: 158422322
Start: 773917
End: 774873
Strand: Direct
Name: 158422322
Synonym: AZC_0698
Alternate gene names: NA
Gene position: 773917-774873 (Clockwise)
Preceding gene: 158422320
Following gene: 158422326
Centisome position: 14.41
GC content: 66.67
Gene sequence:
>957_bases TTGCCATTCTCCTGTCCAGAGACACGGTCGTCCCGCCACGCAGGCTCCGAGAGCAGCGACGGGAGACCCGGACAGAGGAT GACGACCATGACCCAAACCACGAACAGTCTCGTGTTTCCCGACACGTTCCAGATCCGCGACATTCCCACCAACGGCACCA CGCTCCACGTCCGCACGGGCGGGAAGGGGCCGGCCGTCCTGCTACTCCACGGCTATGGCGAGACCGGCGACATGTGGGTG CCGCTTGCCGCGGATCTCGCCGCCGATCACTTCGTCATCGTCCCGGACCTGCGCGGCATGGGCCGCTCCGCAAAGCCTGA GGGCGGCTATGACAAAAAGACCCAGGGGCAGGACATGGCCGGGCTGCTCGATGCCCTCGGCATTGCGGCGGTGGATCTCG TCACCCACGACATCGGCAACATGGTCGGCTTCGCCTTCGCCGCGCAGCATCGCGACCGGGTGCACAGCTTCGTTCTGATC GACGCGCCCTTGCCCGGCGTGGGGCCATGGGAGGAGATCCTGAAGAACCCGCTGCTGTGGCATTTCCGCTTCGGCGGGCC GGACATGGAGCGCCTCGTGGCCGGTCGCGAGCGTATCTATCTCGACCGCTTCTGGAACGAGTTCTCGGCCACGCCCGCCC GCTTCAGCGAGGCCGCGCGGGAGCATTATGCGGCGCTCTATGCGCAGCCCGGCGCCATGCATGCGGGCTTTTCCCAGTTC GCCGCCTTCGATCAGGACGCCATCGACAATCAGGCCTTCCTGAAGGCGGGCAAGCTGACCATTCCGGTGCTCGCGCTCGG CGGAGAGAAATCCTTCGGCCTCGGCATGGGGCAGGTGATGGCCTTTGCGGCGGAGGACGTGACGAGCGGCGTGGTGCCGG ATGCCGGCCACTGGATCATGGAGGAAAACCCCGCCGCCACGGTGGCGCTGGTGCGCGACTTCCTGCCGAAGGCTTGA
Upstream 100 bases:
>100_bases GCCACCGCCACGAAGGCGGCTACCCCGTCGAGCTTGAGCATTGTTCGAATAATCCGTAAACGGGTTTCGCCTTCTGCCGG CTAACCCGGACAATGGAGCT
Downstream 100 bases:
>100_bases AACTGCGGCAAAGGCCCGGCGTCTGCGTGCCGGGCCTTTCGCTATCGGGCGGTCGCCCTCACTCCGCCGCCTGCGCCGGG GCGACGGGCGGAGTGCGGAA
Product: hydrolase
Products: NA
Alternate protein names: SEH; Cytosolic epoxide hydrolase; cEH; Epoxide hydratase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPFSCPETRSSRHAGSESSDGRPGQRMTTMTQTTNSLVFPDTFQIRDIPTNGTTLHVRTGGKGPAVLLLHGYGETGDMWV PLAADLAADHFVIVPDLRGMGRSAKPEGGYDKKTQGQDMAGLLDALGIAAVDLVTHDIGNMVGFAFAAQHRDRVHSFVLI DAPLPGVGPWEEILKNPLLWHFRFGGPDMERLVAGRERIYLDRFWNEFSATPARFSEAAREHYAALYAQPGAMHAGFSQF AAFDQDAIDNQAFLKAGKLTIPVLALGGEKSFGLGMGQVMAFAAEDVTSGVVPDAGHWIMEENPAATVALVRDFLPKA
Sequences:
>Translated_318_residues MPFSCPETRSSRHAGSESSDGRPGQRMTTMTQTTNSLVFPDTFQIRDIPTNGTTLHVRTGGKGPAVLLLHGYGETGDMWV PLAADLAADHFVIVPDLRGMGRSAKPEGGYDKKTQGQDMAGLLDALGIAAVDLVTHDIGNMVGFAFAAQHRDRVHSFVLI DAPLPGVGPWEEILKNPLLWHFRFGGPDMERLVAGRERIYLDRFWNEFSATPARFSEAAREHYAALYAQPGAMHAGFSQF AAFDQDAIDNQAFLKAGKLTIPVLALGGEKSFGLGMGQVMAFAAEDVTSGVVPDAGHWIMEENPAATVALVRDFLPKA >Mature_317_residues PFSCPETRSSRHAGSESSDGRPGQRMTTMTQTTNSLVFPDTFQIRDIPTNGTTLHVRTGGKGPAVLLLHGYGETGDMWVP LAADLAADHFVIVPDLRGMGRSAKPEGGYDKKTQGQDMAGLLDALGIAAVDLVTHDIGNMVGFAFAAQHRDRVHSFVLID APLPGVGPWEEILKNPLLWHFRFGGPDMERLVAGRERIYLDRFWNEFSATPARFSEAAREHYAALYAQPGAMHAGFSQFA AFDQDAIDNQAFLKAGKLTIPVLALGGEKSFGLGMGQVMAFAAEDVTSGVVPDAGHWIMEENPAATVALVRDFLPKA
Specific function: Involved in catabolic degradation of epoxides. Shows highest activity towards C6 and C7 carbocyclic epoxides. Also active towards linear 1,2-epoxyalkanes [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 - InterPro: IPR010497 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF06441 EHN [H]
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 34365; Mature: 34234
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSCPETRSSRHAGSESSDGRPGQRMTTMTQTTNSLVFPDTFQIRDIPTNGTTLHVRTG CCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCEECCCCEEEEEECCCCCEEEEEEC GKGPAVLLLHGYGETGDMWVPLAADLAADHFVIVPDLRGMGRSAKPEGGYDKKTQGQDMA CCCCEEEEEECCCCCCCEEEEEHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHH GLLDALGIAAVDLVTHDIGNMVGFAFAAQHRDRVHSFVLIDAPLPGVGPWEEILKNPLLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHCCCEEE HFRFGGPDMERLVAGRERIYLDRFWNEFSATPARFSEAAREHYAALYAQPGAMHAGFSQF EEECCCCCHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH AAFDQDAIDNQAFLKAGKLTIPVLALGGEKSFGLGMGQVMAFAAEDVTSGVVPDAGHWIM HHCCHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE EENPAATVALVRDFLPKA CCCCCHHHHHHHHHCCCC >Mature Secondary Structure PFSCPETRSSRHAGSESSDGRPGQRMTTMTQTTNSLVFPDTFQIRDIPTNGTTLHVRTG CCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCEECCCCEEEEEECCCCCEEEEEEC GKGPAVLLLHGYGETGDMWVPLAADLAADHFVIVPDLRGMGRSAKPEGGYDKKTQGQDMA CCCCEEEEEECCCCCCCEEEEEHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHH GLLDALGIAAVDLVTHDIGNMVGFAFAAQHRDRVHSFVLIDAPLPGVGPWEEILKNPLLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHCCCEEE HFRFGGPDMERLVAGRERIYLDRFWNEFSATPARFSEAAREHYAALYAQPGAMHAGFSQF EEECCCCCHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH AAFDQDAIDNQAFLKAGKLTIPVLALGGEKSFGLGMGQVMAFAAEDVTSGVVPDAGHWIM HHCCHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE EENPAATVALVRDFLPKA CCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9578475 [H]