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The map label for this gene is nrtC [H]

Identifier: 158422315

GI number: 158422315

Start: 764961

End: 766097

Strand: Reverse

Name: nrtC [H]

Synonym: AZC_0691

Alternate gene names: 158422315

Gene position: 766097-764961 (Counterclockwise)

Preceding gene: 158422316

Following gene: 158422314

Centisome position: 14.27

GC content: 69.83

Gene sequence:

>1137_bases
ATGAAACGGCTGTCCATCGGCTTCATCCCCCTCACCGACGCCGCCGTGCTGATCGCCGCCGCCGAGCGCGGCTTCGCCAT
GGCCGAGGGCATCGAGATCGAGCTGCACAAGGAAGTCTCCTGGGCCAACATCCGCGACAAGGTGAATGTGGGCCTGCTGG
ACGGCGCCCATATGCTGGGCCCGCTCGCCATCGCCTCCTCCCTCGGCCTCGGCCATGTGCGGGTGCCCCTGGTGGTGCCC
TTCGCGCTCAACCTCAACGGCAGCGCCATCACCATCGCGAAATCCGTCTATGCCGCCATGGGCGAGACGGGCGGCGACCT
CACCTCCGCCCTTGGGGCGGCGCAGGCGCTGGGCAAGGTGGTGATCGACCGCAGGGAGCGCGGCGAGGACCCGCTCACCT
TCGCGGCGGTCTATACCTTCTCCACCCACCATTATCTCATCCGCCACTTCCTCACCGCAGGCGGCATCGACCCGGACCGG
GACGTGCGGCTCGTGGTGATCCCCCCGCCCTTCATGGCCGAGAGCCTGCGCAACGGCCTCATCCACGGCTTCTCGGTGGG
CTCGCCCTGGAACAGCGTGGCGGTGGATGCGGACGTGGGCCGCATCGCGGTGCTGGGGGCGGAGATCTTCGGCTGGGTGC
CGGAGAAGGTGCTGGGCGTCCATGCGCGCTTCGCCAATGCGGAGCCTGAAGTTCTGCACCGGCTGGTGCGGGCGCTGAAT
GCCGCCGCCGCCTGGTGCGAGGACCCGGCCAACCACGCCGACCTCGCCCGCCTGCTGAGCGAGCCGCGCCACCTCTCCTT
GCCAGCCGACATCCTGCGCCGGACGCTGGACGGGCGCCTGCACACCGCCCCCGGCGGCGTGCTGCGGTCGCATCCGGACT
ATCTGGTCCTCCACCGGGAGGGCGCCAACCGCCCCGATCCGGACCATGCGCTGTGGATGTATCACCAGATCGTCGCCGCC
CATCAGGGCGACTGGGCACCGGATGCCGCTAGGGAAGCCATATCCGTCTATCGGCCCGACATCTTCGATGCGGCGGTGGG
GGCGGCGCCCCCCTCCCCACCGCGCGAACCGGATTGCGTGGCCACCCAGTTCGGCCCCGTTTTCGACAAGGAGCGCTTCC
TGGCGACGGGGGAATGA

Upstream 100 bases:

>100_bases
AGGAAGACGCCTACAGCCTCCTGCGCCGCACCGCGATGAACGAGAAGAAGCGCATCGCCGACATCGCCCAATCCATCATC
ACCGCCGCGGAGCTGCTGCG

Downstream 100 bases:

>100_bases
CCTTCCGCTCGGGCGGAAAGGCCTTCGCACCTCTCCGGAACGTGAAAAACCTTTACCCGCGCTCCGCCGACGCCTTGCGG
GGCAAAATCCCCCCTCCTAT

Product: nitrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKRLSIGFIPLTDAAVLIAAAERGFAMAEGIEIELHKEVSWANIRDKVNVGLLDGAHMLGPLAIASSLGLGHVRVPLVVP
FALNLNGSAITIAKSVYAAMGETGGDLTSALGAAQALGKVVIDRRERGEDPLTFAAVYTFSTHHYLIRHFLTAGGIDPDR
DVRLVVIPPPFMAESLRNGLIHGFSVGSPWNSVAVDADVGRIAVLGAEIFGWVPEKVLGVHARFANAEPEVLHRLVRALN
AAAAWCEDPANHADLARLLSEPRHLSLPADILRRTLDGRLHTAPGGVLRSHPDYLVLHREGANRPDPDHALWMYHQIVAA
HQGDWAPDAAREAISVYRPDIFDAAVGAAPPSPPREPDCVATQFGPVFDKERFLATGE

Sequences:

>Translated_378_residues
MKRLSIGFIPLTDAAVLIAAAERGFAMAEGIEIELHKEVSWANIRDKVNVGLLDGAHMLGPLAIASSLGLGHVRVPLVVP
FALNLNGSAITIAKSVYAAMGETGGDLTSALGAAQALGKVVIDRRERGEDPLTFAAVYTFSTHHYLIRHFLTAGGIDPDR
DVRLVVIPPPFMAESLRNGLIHGFSVGSPWNSVAVDADVGRIAVLGAEIFGWVPEKVLGVHARFANAEPEVLHRLVRALN
AAAAWCEDPANHADLARLLSEPRHLSLPADILRRTLDGRLHTAPGGVLRSHPDYLVLHREGANRPDPDHALWMYHQIVAA
HQGDWAPDAAREAISVYRPDIFDAAVGAAPPSPPREPDCVATQFGPVFDKERFLATGE
>Mature_378_residues
MKRLSIGFIPLTDAAVLIAAAERGFAMAEGIEIELHKEVSWANIRDKVNVGLLDGAHMLGPLAIASSLGLGHVRVPLVVP
FALNLNGSAITIAKSVYAAMGETGGDLTSALGAAQALGKVVIDRRERGEDPLTFAAVYTFSTHHYLIRHFLTAGGIDPDR
DVRLVVIPPPFMAESLRNGLIHGFSVGSPWNSVAVDADVGRIAVLGAEIFGWVPEKVLGVHARFANAEPEVLHRLVRALN
AAAAWCEDPANHADLARLLSEPRHLSLPADILRRTLDGRLHTAPGGVLRSHPDYLVLHREGANRPDPDHALWMYHQIVAA
HQGDWAPDAAREAISVYRPDIFDAAVGAAPPSPPREPDCVATQFGPVFDKERFLATGE

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 40625; Mature: 40625

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLSIGFIPLTDAAVLIAAAERGFAMAEGIEIELHKEVSWANIRDKVNVGLLDGAHMLG
CCCEEEEEEECCCHHEEEHHHHCCCEECCCCEEEEECCCCHHCCCCCCEEEEECCHHHHH
PLAIASSLGLGHVRVPLVVPFALNLNGSAITIAKSVYAAMGETGGDLTSALGAAQALGKV
HHHHHHHCCCCEEEEEEEEEEEEECCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VIDRRERGEDPLTFAAVYTFSTHHYLIRHFLTAGGIDPDRDVRLVVIPPPFMAESLRNGL
HHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCC
IHGFSVGSPWNSVAVDADVGRIAVLGAEIFGWVPEKVLGVHARFANAEPEVLHRLVRALN
EEEEECCCCCCCEEEECCCCEEEEEHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
AAAAWCEDPANHADLARLLSEPRHLSLPADILRRTLDGRLHTAPGGVLRSHPDYLVLHRE
HHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCEECCCCCHHCCCCCEEEEECC
GANRPDPDHALWMYHQIVAAHQGDWAPDAAREAISVYRPDIFDAAVGAAPPSPPREPDCV
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
ATQFGPVFDKERFLATGE
HHCCCCCCCCCCEEECCC
>Mature Secondary Structure
MKRLSIGFIPLTDAAVLIAAAERGFAMAEGIEIELHKEVSWANIRDKVNVGLLDGAHMLG
CCCEEEEEEECCCHHEEEHHHHCCCEECCCCEEEEECCCCHHCCCCCCEEEEECCHHHHH
PLAIASSLGLGHVRVPLVVPFALNLNGSAITIAKSVYAAMGETGGDLTSALGAAQALGKV
HHHHHHHCCCCEEEEEEEEEEEEECCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VIDRRERGEDPLTFAAVYTFSTHHYLIRHFLTAGGIDPDRDVRLVVIPPPFMAESLRNGL
HHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCC
IHGFSVGSPWNSVAVDADVGRIAVLGAEIFGWVPEKVLGVHARFANAEPEVLHRLVRALN
EEEEECCCCCCCEEEECCCCEEEEEHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
AAAAWCEDPANHADLARLLSEPRHLSLPADILRRTLDGRLHTAPGGVLRSHPDYLVLHRE
HHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCEECCCCCHHCCCCCEEEEECC
GANRPDPDHALWMYHQIVAAHQGDWAPDAAREAISVYRPDIFDAAVGAAPPSPPREPDCV
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
ATQFGPVFDKERFLATGE
HHCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]