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The map label for this gene is ybgF [C]

Identifier: 158422150

GI number: 158422150

Start: 581273

End: 582193

Strand: Direct

Name: ybgF [C]

Synonym: AZC_0526

Alternate gene names: 158422150

Gene position: 581273-582193 (Clockwise)

Preceding gene: 158422149

Following gene: 158422151

Centisome position: 10.82

GC content: 66.02

Gene sequence:

>921_bases
GTGTTTTCAGCGTATGGCGCCATGAAACATTCCGCCCTCGTCAAGATTGCACTTCTGGCGGCTACTGCCGCCTTGCTGAC
CGGGCCGGCGCTGGCACAGCAGTCGGGCAACGGGCTGTTTGGCGACATCTTCAAGCCGCCGGCGAATGTTCAGAACGATA
CGGTCGCCAACCAGCAGAGCGAGCTTCTGATGCGTGTGGAGCGCATCGAAAACCAGTTGCGCGTGCTCACCGGCCAGATC
GAACAGTTGCAGTATCGCAATCAACAGCTCGAGCAGCAGCTCGGTGCGCGGGGTGCGGGCGGCGTGCCGCCGGCCGCCGC
GACGGCGCCGCGCCCGCCCGTGACGCCCCCCGTTGCCTCCGGAGGCCGCCGGTCGGACGCGTTCGAGCCCTCCGAGGATC
CCGCTGCGCCCGGCGTGCCGCAGCCGCTGGGCTCGCCCACCAGTGCGTCCGTGGCGCCGCCGCGTCCTGCCGGCGCGCCG
CTCGACATCGGCTCGGGCGCCCAGCGGCCCCCTGTGGCCGCCGGTGTTGCCGCAGCGTCCACACCCAAGGACCTCTACGA
CCTCGGCTATTCCTACGTGCAGCGGCAGGATTATCCGCAGGCGGAGCAGACCTTTAAGCAGTTCCTGCAGACCTATCCCA
CGGACCGCCTGACGCCCGACGCCACGTTCATGCTTGGCGAAACGCTCTATTTGCGGCAGACCTATAAGGAGGCGGCAGAG
CAGTTTCTGCAGGTCTCGACAAAATATCCAAACTTCACGCGGGCACCCGATGCTTTGCTTCGTCTCGGCCAGTCGCTGGC
CGCGCTGAACGAACGGGAGGCGGCTTGCGCAACTTTCGCCGAGGTGGACCGGAAGTTCCCTCGGGCTACATCGAATGTGC
GTCAAGCTGTGGAGCGTGAGCAAAAACGTGCAGGCTGCTGA

Upstream 100 bases:

>100_bases
TTTGCTTTTGCGATTTGATACAGTCGTTGTGGGGCCACACTTTGGACGTTATCGAACGCCTAAGGTGAGATGCGAGGGAG
GCAGCTCCCTAGTTTGATCA

Downstream 100 bases:

>100_bases
GCAGGACTACGCGCCTCCCATCGAGGAGGAAGAACTCGAGGGGCTGTTCGGGATCTTCCGCGGCCACCGGCGCATCCTTC
TCGGCGTGTCGGGCGGCCCC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: L-Pal System YbgF; TPR Repeat-Containing Protein; TPR Domain Protein; TPR RepeatMolluscan Rhodopsin C-Terminal Domain Protein; TPR Repeat Protein; L System Periplasmic Component YbgF; Tetratricopeptide TPR2 Protein; Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MFSAYGAMKHSALVKIALLAATAALLTGPALAQQSGNGLFGDIFKPPANVQNDTVANQQSELLMRVERIENQLRVLTGQI
EQLQYRNQQLEQQLGARGAGGVPPAAATAPRPPVTPPVASGGRRSDAFEPSEDPAAPGVPQPLGSPTSASVAPPRPAGAP
LDIGSGAQRPPVAAGVAAASTPKDLYDLGYSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFMLGETLYLRQTYKEAAE
QFLQVSTKYPNFTRAPDALLRLGQSLAALNEREAACATFAEVDRKFPRATSNVRQAVEREQKRAGC

Sequences:

>Translated_306_residues
MFSAYGAMKHSALVKIALLAATAALLTGPALAQQSGNGLFGDIFKPPANVQNDTVANQQSELLMRVERIENQLRVLTGQI
EQLQYRNQQLEQQLGARGAGGVPPAAATAPRPPVTPPVASGGRRSDAFEPSEDPAAPGVPQPLGSPTSASVAPPRPAGAP
LDIGSGAQRPPVAAGVAAASTPKDLYDLGYSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFMLGETLYLRQTYKEAAE
QFLQVSTKYPNFTRAPDALLRLGQSLAALNEREAACATFAEVDRKFPRATSNVRQAVEREQKRAGC
>Mature_306_residues
MFSAYGAMKHSALVKIALLAATAALLTGPALAQQSGNGLFGDIFKPPANVQNDTVANQQSELLMRVERIENQLRVLTGQI
EQLQYRNQQLEQQLGARGAGGVPPAAATAPRPPVTPPVASGGRRSDAFEPSEDPAAPGVPQPLGSPTSASVAPPRPAGAP
LDIGSGAQRPPVAAGVAAASTPKDLYDLGYSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFMLGETLYLRQTYKEAAE
QFLQVSTKYPNFTRAPDALLRLGQSLAALNEREAACATFAEVDRKFPRATSNVRQAVEREQKRAGC

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32763; Mature: 32763

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSAYGAMKHSALVKIALLAATAALLTGPALAQQSGNGLFGDIFKPPANVQNDTVANQQS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
ELLMRVERIENQLRVLTGQIEQLQYRNQQLEQQLGARGAGGVPPAAATAPRPPVTPPVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
GGRRSDAFEPSEDPAAPGVPQPLGSPTSASVAPPRPAGAPLDIGSGAQRPPVAAGVAAAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
TPKDLYDLGYSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFMLGETLYLRQTYKEAAE
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QFLQVSTKYPNFTRAPDALLRLGQSLAALNEREAACATFAEVDRKFPRATSNVRQAVERE
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
QKRAGC
HHHCCC
>Mature Secondary Structure
MFSAYGAMKHSALVKIALLAATAALLTGPALAQQSGNGLFGDIFKPPANVQNDTVANQQS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
ELLMRVERIENQLRVLTGQIEQLQYRNQQLEQQLGARGAGGVPPAAATAPRPPVTPPVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
GGRRSDAFEPSEDPAAPGVPQPLGSPTSASVAPPRPAGAPLDIGSGAQRPPVAAGVAAAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
TPKDLYDLGYSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFMLGETLYLRQTYKEAAE
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QFLQVSTKYPNFTRAPDALLRLGQSLAALNEREAACATFAEVDRKFPRATSNVRQAVERE
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
QKRAGC
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA