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The map label for this gene is ybgC [C]

Identifier: 158422144

GI number: 158422144

Start: 575604

End: 576272

Strand: Direct

Name: ybgC [C]

Synonym: AZC_0520

Alternate gene names: 158422144

Gene position: 575604-576272 (Clockwise)

Preceding gene: 158422143

Following gene: 158422145

Centisome position: 10.72

GC content: 66.37

Gene sequence:

>669_bases
TTGAGAGCGGGCTCGCATCAAGAAAGAGGGAAAAGCCCTCTCCCGCTTGGCTATGGGAGGGGTGGGAGGGGGCCAAGGCC
TGATGCGTGCGGCCGAGGGGCGGTCGGCCACCCCAACGGATCAAAGTTTGAGGACGATGGAATGAAACTGGACCTCACCG
GCGAGCGCGCCATGACCCCGGGCGAGCGCGAGGCCTATCCCCATCTCGCCGGCCGGCTCATTCCCGGCGGCCACTGCCTC
GGCCTGCGTGTCTATTACGAGGACACGGATTTCTCGGGCATCGTCTATCACGCCAATTACCTGAAGTTCATGGAGCGCGG
CCGCTCCGACTACATGCGCCTGCTGGGCGTGGTGCAGGGCGAACTCTTTGCCGAGGCCGCCGCCGAGGCGCCGGGTTTTC
ACTTCGTCGTGCGTTCCATGCAGATCGACTTCAAGAAGCCCGCGCGGATCGACGACGTGCTCGAGGTCGTGACCCTGTCC
AAGGATGTGGCCGGGGCCTCCATCACGCTCGCCCAATCGGTGCGGCGGGGCGAGGAGGAGCTGGTTTCAGCGTTGGTGCG
GGTTGCCTTCGTCTCGCAGGGCCGGGCCAAGCGCATTCCCGACGCCCTGCGCCGGGCGACGCTGGAGGATGCCACCGTCG
TGGCCGGTGCTGTCGCACCGCAGCGATAA

Upstream 100 bases:

>100_bases
ACGCGCGAAAAGCGTGAGCTTGAGAACGTGTCCCGCTTGGTGCCTTCCCCCTCCCCAACCCTCCCCTAGCCAAGCGGGAG
AGGGGGCCTGTCGTGATGGG

Downstream 100 bases:

>100_bases
CCCTCCCTTAAGCTTAATCCCCGTAGGGTCCGAACCGCCGCCGGCATGCTGCATCGCGGCCGATCGCCCAAGTTTGGACG
CACTCCCCCTCGAAAGAGCG

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MRAGSHQERGKSPLPLGYGRGGRGPRPDACGRGAVGHPNGSKFEDDGMKLDLTGERAMTPGEREAYPHLAGRLIPGGHCL
GLRVYYEDTDFSGIVYHANYLKFMERGRSDYMRLLGVVQGELFAEAAAEAPGFHFVVRSMQIDFKKPARIDDVLEVVTLS
KDVAGASITLAQSVRRGEEELVSALVRVAFVSQGRAKRIPDALRRATLEDATVVAGAVAPQR

Sequences:

>Translated_222_residues
MRAGSHQERGKSPLPLGYGRGGRGPRPDACGRGAVGHPNGSKFEDDGMKLDLTGERAMTPGEREAYPHLAGRLIPGGHCL
GLRVYYEDTDFSGIVYHANYLKFMERGRSDYMRLLGVVQGELFAEAAAEAPGFHFVVRSMQIDFKKPARIDDVLEVVTLS
KDVAGASITLAQSVRRGEEELVSALVRVAFVSQGRAKRIPDALRRATLEDATVVAGAVAPQR
>Mature_222_residues
MRAGSHQERGKSPLPLGYGRGGRGPRPDACGRGAVGHPNGSKFEDDGMKLDLTGERAMTPGEREAYPHLAGRLIPGGHCL
GLRVYYEDTDFSGIVYHANYLKFMERGRSDYMRLLGVVQGELFAEAAAEAPGFHFVVRSMQIDFKKPARIDDVLEVVTLS
KDVAGASITLAQSVRRGEEELVSALVRVAFVSQGRAKRIPDALRRATLEDATVVAGAVAPQR

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=102, Percent_Identity=41.1764705882353, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 24063; Mature: 24063

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGSHQERGKSPLPLGYGRGGRGPRPDACGRGAVGHPNGSKFEDDGMKLDLTGERAMTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
GEREAYPHLAGRLIPGGHCLGLRVYYEDTDFSGIVYHANYLKFMERGRSDYMRLLGVVQG
CCHHCCHHHHCCCCCCCEEEEEEEEEECCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHH
ELFAEAAAEAPGFHFVVRSMQIDFKKPARIDDVLEVVTLSKDVAGASITLAQSVRRGEEE
HHHHHHHHCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH
LVSALVRVAFVSQGRAKRIPDALRRATLEDATVVAGAVAPQR
HHHHHHHHHHHHCCCHHCCHHHHHHHHHCCHHHEECCCCCCC
>Mature Secondary Structure
MRAGSHQERGKSPLPLGYGRGGRGPRPDACGRGAVGHPNGSKFEDDGMKLDLTGERAMTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
GEREAYPHLAGRLIPGGHCLGLRVYYEDTDFSGIVYHANYLKFMERGRSDYMRLLGVVQG
CCHHCCHHHHCCCCCCCEEEEEEEEEECCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHH
ELFAEAAAEAPGFHFVVRSMQIDFKKPARIDDVLEVVTLSKDVAGASITLAQSVRRGEEE
HHHHHHHHCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH
LVSALVRVAFVSQGRAKRIPDALRRATLEDATVVAGAVAPQR
HHHHHHHHHHHHCCCHHCCHHHHHHHHHCCHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]