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The map label for this gene is gntR [H]

Identifier: 158422099

GI number: 158422099

Start: 532866

End: 533543

Strand: Reverse

Name: gntR [H]

Synonym: AZC_0475

Alternate gene names: 158422099

Gene position: 533543-532866 (Counterclockwise)

Preceding gene: 158422100

Following gene: 158422097

Centisome position: 9.94

GC content: 69.62

Gene sequence:

>678_bases
ATGCTGGAACGCGGCGCCTCCTTCCGCTCGCTTGAAGCCGAAGCGGCGCCGCGCTCGCTGCGCGAAGAAGCCTATGACAT
CATCAAGCAGCGCATCATCCGCGGCCTCTACCGGCCGGGAGAGGCGCTGAGCGAGGCGGTCGTCTCGTCCTCCCTGAGCC
TCGGGCGCACGCCCGTGCGACAGGCCTTCGACCGGCTCATGCGGGACGGGCTCGTGGAGGTGCTGCCGCGCAAGGGCATC
ATCGTGCGCCCCATCACCGCCGACGAGATCCGCGACATGGTGCACGTGCGCCTCCTCAACGAGGGCTTCTGCGCGCGGCT
CGCCGCCGAGCGGGCGGACCAGGCGGTGCTCGGCGTCCTCAACGACACACTCGACCAAAGCCACAAGGCGGCCCGCGACA
GCGACATCGAGACGCTCATGGTGCTCGACCGGCGTTTCCACGCGGCGCTCGCCAGCGCGGCCGGCAATGCGGTCCTGAGC
GACATCCTGAGCAACCTGCACGACCGCTCGCAGCGGGTGTGGTTCCTCTCCCTGCGCGAACACCAGCACCACGCACGGGT
GGTGGAGGAGCATGCCGGCATCGTCGCCGCCATTTCCGCCCGCGACGCAGAAGGCGCGGAGGCGGTGATGCGCGCGCACA
TCCTGTCGTTCGCGGAAAACCTCAGCCGGCAGCTCTGA

Upstream 100 bases:

>100_bases
CGCCCGGCCGAGCGCTTCGAGTTCGAGATCGAGGACCCGATCCTCAAGCGCACCATCCGCCACGGCTATGACGTGGCCGT
GCTGCCCGTGGTGGGCTGAC

Downstream 100 bases:

>100_bases
GCCACGCCGCGCTGCGGACGCCGCCGCGCGATCACGCGATGATGTCTGGAAACAGCTGATCCTCAAGATGTGATATGCGG
TCCTTGAGCTGCAGTTTGCG

Product: regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLERGASFRSLEAEAAPRSLREEAYDIIKQRIIRGLYRPGEALSEAVVSSSLSLGRTPVRQAFDRLMRDGLVEVLPRKGI
IVRPITADEIRDMVHVRLLNEGFCARLAAERADQAVLGVLNDTLDQSHKAARDSDIETLMVLDRRFHAALASAAGNAVLS
DILSNLHDRSQRVWFLSLREHQHHARVVEEHAGIVAAISARDAEGAEAVMRAHILSFAENLSRQL

Sequences:

>Translated_225_residues
MLERGASFRSLEAEAAPRSLREEAYDIIKQRIIRGLYRPGEALSEAVVSSSLSLGRTPVRQAFDRLMRDGLVEVLPRKGI
IVRPITADEIRDMVHVRLLNEGFCARLAAERADQAVLGVLNDTLDQSHKAARDSDIETLMVLDRRFHAALASAAGNAVLS
DILSNLHDRSQRVWFLSLREHQHHARVVEEHAGIVAAISARDAEGAEAVMRAHILSFAENLSRQL
>Mature_225_residues
MLERGASFRSLEAEAAPRSLREEAYDIIKQRIIRGLYRPGEALSEAVVSSSLSLGRTPVRQAFDRLMRDGLVEVLPRKGI
IVRPITADEIRDMVHVRLLNEGFCARLAAERADQAVLGVLNDTLDQSHKAARDSDIETLMVLDRRFHAALASAAGNAVLS
DILSNLHDRSQRVWFLSLREHQHHARVVEEHAGIVAAISARDAEGAEAVMRAHILSFAENLSRQL

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=213, Percent_Identity=27.2300469483568, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI87082149, Length=202, Percent_Identity=30.1980198019802, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 24983; Mature: 24983

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERGASFRSLEAEAAPRSLREEAYDIIKQRIIRGLYRPGEALSEAVVSSSLSLGRTPVR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
QAFDRLMRDGLVEVLPRKGIIVRPITADEIRDMVHVRLLNEGFCARLAAERADQAVLGVL
HHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDTLDQSHKAARDSDIETLMVLDRRFHAALASAAGNAVLSDILSNLHDRSQRVWFLSLRE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH
HQHHARVVEEHAGIVAAISARDAEGAEAVMRAHILSFAENLSRQL
HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLERGASFRSLEAEAAPRSLREEAYDIIKQRIIRGLYRPGEALSEAVVSSSLSLGRTPVR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
QAFDRLMRDGLVEVLPRKGIIVRPITADEIRDMVHVRLLNEGFCARLAAERADQAVLGVL
HHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDTLDQSHKAARDSDIETLMVLDRRFHAALASAAGNAVLSDILSNLHDRSQRVWFLSLRE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH
HQHHARVVEEHAGIVAAISARDAEGAEAVMRAHILSFAENLSRQL
HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]