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The map label for this gene is hfaC [H]

Identifier: 158422097

GI number: 158422097

Start: 530064

End: 531875

Strand: Reverse

Name: hfaC [H]

Synonym: AZC_0473

Alternate gene names: 158422097

Gene position: 531875-530064 (Counterclockwise)

Preceding gene: 158422099

Following gene: 158422088

Centisome position: 9.9

GC content: 67.49

Gene sequence:

>1812_bases
ATGGCTCCTCCTCTCGTCCTGCTGCAAGACATTCACCTGCGCTTTGGCGCGACGCCTCTCCTCGACGGCGCGGAGCTTTC
CGTGGCCCCGGGCGAGCGTTTGTGCCTCGTGGGCCGGAACGGCTCGGGCAAGTCCACGCTGCTGAAGGTGGCGGCGGGCC
TGCTGGAGCCGGATGATGGCACGCGCTTCTTCCAGCCGGGCGCGACCGTCCGCTATCTGCCGCAGGAGCCGGATTTCACC
GGCTTCGCGACCACCTTGGCCTATGTGGAAGCCGGTCTCGGGCCGGGCGACGACCACTATCGCGCCCAGTATCTGCTGGA
GCAGCTCGGCCTGACGGGTCAGGAAGACCCGGCGCATCTGTCTGGCGGCGAAGCCCGCCGGGCGGCTTTGGCGCGCGTCA
TCGCGCCCGAACCGGACGTCCTCATGCTGGACGAGCCGACCAACCATCTCGACCTGCCCGCCATCGAGTGGCTGGAAAGC
GAGCTGAAGAGCCTGCGCTCGGCCCTCGTGCTGATCTCCCATGACCGGCGCTTCCTCGAAAACCTCTCCCGCGCCACCGT
CTGGCTCGATCGCGGCACCACGCGACGGCTCGATCAGGGCTTCGGCGCCTTCGAGGCCTGGCGCGATCAGGTGCTGGAAC
AGGAAGAGACCGAGCGCCACAAGCTCGACCGCAAGATTGTCGCGGAGCTGGATTGGCTGCGCTATGGCGTCACCGCCCGG
CGCAAGCGCAATGTCCGCCGCCTCGGCGACCTGCACGCCATGCGCAAGGACCGCCGCGAGGTGCGCCGCGCCCAGGGCAA
TGTGAAGATCACCGTCACCGAGGCGGAGACCTCCGGCAAGCTGGTGATCGAGGCGAGGGCCATCGCCAAGGCCTTCGACG
GCGTGAGCGTGGTGCGCGACTTCTCCACCCGCATCGCGAGGGGCGACCGCATCGGCATCGTCGGCCCCAACGGCGCCGGC
AAGACCACGCTGCTCAAGATGCTCATCGGCACGCTGAAGCCGGACAGCGGTTCGGTGAAGCTGGGCTCCAATCTGGAAAT
CGCCTCGCTGGACCAGAAGCGCGCCGCGCTCCGCCCCGAGACCACGCTGCGCGATGCCCTCACCGGCGGGGGTAGCGATA
CGGTGATGGTCGGCGGCCAGCCCAAGCACGTGATGGGCTATCTGAAGGACTTCCTCTTCACGCCCGAGCAGGCCAATTCG
CCCCTCTCCGTGCTCTCGGGCGGCGAGCGCGGCCGGCTGATGCTGGCACGTGCGCTGGCCCTGCCGTCTAACCTGCTGGT
GCTCGACGAGCCGACCAACGATCTCGACCTTGAGACGCTGGACCTCTTGCAGGAGATGGTGGCCGACTATCCGGGCACGG
TCATTCTGGTGAGCCATGACCGTGACTTCCTCGACCGTACCGTCACATCGGTGATCGCGGCGGAGGGCGATGGCGTCTTC
TCCGAATATGCCGGCGGCTATTCGGACATGGTGAACCAGCGCGGCCACGGCGTGGAAGCCAAGGCCAAGGCGAAAGCCGA
GGGCAAGGCGTCCCCGGCCGCGGCGCCCGCTGCGGGCAAGCCGAAGGAGACCAAGCGCCGCCTGAGCTTTGCGGAAAAGC
ACGCCCTCGAAACCCTGCCCAAGACGCTGGACAAGCTCAGGGTAGACGCGGCGGTGCTGGAAAAGAAGATCGCCGACCCG
AACCTCTATGCCAAGGACCCCGCCGCCTTCGAGAAGGCGAGCACCGCGCTCGGCAAGATCCACGCGGACATCGAGGCGGC
CGAGGAAGAATGGCTGCGCCTCGAAATCCTGAAGGAAGAACTGGGGGGCTGA

Upstream 100 bases:

>100_bases
TTGAAAGGATGCGCGCGGGTGAAGCCGTGCGAGCAGCAGGACAGGCGGTCCTGCGGAGACAGCCTTTGCGTTCACGCGCA
AGGAAGGCTAATTCCGCGCC

Downstream 100 bases:

>100_bases
AGCTCCTTACCTCAAGGCTTGCGGACCGCGCGCAGCCCCCCCGCCCGCGGTCCCGCCAACACGGCGGCTACTGCACGAAG
ATGGTGCGCAGCGTGCCGAT

Product: ATPase

Products: NA

Alternate protein names: Protein HfaC [H]

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MAPPLVLLQDIHLRFGATPLLDGAELSVAPGERLCLVGRNGSGKSTLLKVAAGLLEPDDGTRFFQPGATVRYLPQEPDFT
GFATTLAYVEAGLGPGDDHYRAQYLLEQLGLTGQEDPAHLSGGEARRAALARVIAPEPDVLMLDEPTNHLDLPAIEWLES
ELKSLRSALVLISHDRRFLENLSRATVWLDRGTTRRLDQGFGAFEAWRDQVLEQEETERHKLDRKIVAELDWLRYGVTAR
RKRNVRRLGDLHAMRKDRREVRRAQGNVKITVTEAETSGKLVIEARAIAKAFDGVSVVRDFSTRIARGDRIGIVGPNGAG
KTTLLKMLIGTLKPDSGSVKLGSNLEIASLDQKRAALRPETTLRDALTGGGSDTVMVGGQPKHVMGYLKDFLFTPEQANS
PLSVLSGGERGRLMLARALALPSNLLVLDEPTNDLDLETLDLLQEMVADYPGTVILVSHDRDFLDRTVTSVIAAEGDGVF
SEYAGGYSDMVNQRGHGVEAKAKAKAEGKASPAAAPAAGKPKETKRRLSFAEKHALETLPKTLDKLRVDAAVLEKKIADP
NLYAKDPAAFEKASTALGKIHADIEAAEEEWLRLEILKEELGG

Sequences:

>Translated_603_residues
MAPPLVLLQDIHLRFGATPLLDGAELSVAPGERLCLVGRNGSGKSTLLKVAAGLLEPDDGTRFFQPGATVRYLPQEPDFT
GFATTLAYVEAGLGPGDDHYRAQYLLEQLGLTGQEDPAHLSGGEARRAALARVIAPEPDVLMLDEPTNHLDLPAIEWLES
ELKSLRSALVLISHDRRFLENLSRATVWLDRGTTRRLDQGFGAFEAWRDQVLEQEETERHKLDRKIVAELDWLRYGVTAR
RKRNVRRLGDLHAMRKDRREVRRAQGNVKITVTEAETSGKLVIEARAIAKAFDGVSVVRDFSTRIARGDRIGIVGPNGAG
KTTLLKMLIGTLKPDSGSVKLGSNLEIASLDQKRAALRPETTLRDALTGGGSDTVMVGGQPKHVMGYLKDFLFTPEQANS
PLSVLSGGERGRLMLARALALPSNLLVLDEPTNDLDLETLDLLQEMVADYPGTVILVSHDRDFLDRTVTSVIAAEGDGVF
SEYAGGYSDMVNQRGHGVEAKAKAKAEGKASPAAAPAAGKPKETKRRLSFAEKHALETLPKTLDKLRVDAAVLEKKIADP
NLYAKDPAAFEKASTALGKIHADIEAAEEEWLRLEILKEELGG
>Mature_602_residues
APPLVLLQDIHLRFGATPLLDGAELSVAPGERLCLVGRNGSGKSTLLKVAAGLLEPDDGTRFFQPGATVRYLPQEPDFTG
FATTLAYVEAGLGPGDDHYRAQYLLEQLGLTGQEDPAHLSGGEARRAALARVIAPEPDVLMLDEPTNHLDLPAIEWLESE
LKSLRSALVLISHDRRFLENLSRATVWLDRGTTRRLDQGFGAFEAWRDQVLEQEETERHKLDRKIVAELDWLRYGVTARR
KRNVRRLGDLHAMRKDRREVRRAQGNVKITVTEAETSGKLVIEARAIAKAFDGVSVVRDFSTRIARGDRIGIVGPNGAGK
TTLLKMLIGTLKPDSGSVKLGSNLEIASLDQKRAALRPETTLRDALTGGGSDTVMVGGQPKHVMGYLKDFLFTPEQANSP
LSVLSGGERGRLMLARALALPSNLLVLDEPTNDLDLETLDLLQEMVADYPGTVILVSHDRDFLDRTVTSVIAAEGDGVFS
EYAGGYSDMVNQRGHGVEAKAKAKAEGKASPAAAPAAGKPKETKRRLSFAEKHALETLPKTLDKLRVDAAVLEKKIADPN
LYAKDPAAFEKASTALGKIHADIEAAEEEWLRLEILKEELGG

Specific function: Involved in attachment of the holdfast to the cell. The holdfast is a structure that allows the bacteria to firmly adhere to surfaces [H]

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=543, Percent_Identity=30.3867403314917, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI27881506, Length=527, Percent_Identity=28.0834914611006, Blast_Score=140, Evalue=5e-33,
Organism=Homo sapiens, GI10947137, Length=527, Percent_Identity=28.0834914611006, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI69354671, Length=386, Percent_Identity=30.0518134715026, Blast_Score=136, Evalue=7e-32,
Organism=Homo sapiens, GI10947135, Length=386, Percent_Identity=30.0518134715026, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI90421313, Length=211, Percent_Identity=28.436018957346, Blast_Score=70, Evalue=8e-12,
Organism=Escherichia coli, GI1787182, Length=633, Percent_Identity=39.9684044233807, Blast_Score=416, Evalue=1e-117,
Organism=Escherichia coli, GI2367384, Length=512, Percent_Identity=32.6171875, Blast_Score=272, Evalue=5e-74,
Organism=Escherichia coli, GI1787041, Length=535, Percent_Identity=28.2242990654206, Blast_Score=208, Evalue=1e-54,
Organism=Escherichia coli, GI1789751, Length=647, Percent_Identity=27.6661514683153, Blast_Score=194, Evalue=2e-50,
Organism=Escherichia coli, GI1790190, Length=536, Percent_Identity=25.1865671641791, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788225, Length=217, Percent_Identity=29.0322580645161, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1787712, Length=206, Percent_Identity=31.0679611650485, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1788165, Length=183, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI48994943, Length=599, Percent_Identity=23.3722871452421, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787029, Length=215, Percent_Identity=29.3023255813954, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87081791, Length=193, Percent_Identity=30.0518134715026, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI87081834, Length=193, Percent_Identity=32.1243523316062, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788761, Length=229, Percent_Identity=29.6943231441048, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081709, Length=213, Percent_Identity=25.3521126760563, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787370, Length=194, Percent_Identity=28.8659793814433, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1789873, Length=202, Percent_Identity=27.7227722772277, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788210, Length=225, Percent_Identity=29.7777777777778, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786319, Length=197, Percent_Identity=28.9340101522843, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1786253, Length=190, Percent_Identity=30.5263157894737, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1786563, Length=212, Percent_Identity=29.7169811320755, Blast_Score=66, Evalue=8e-12,
Organism=Escherichia coli, GI1787164, Length=154, Percent_Identity=33.1168831168831, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI48994997, Length=183, Percent_Identity=30.0546448087432, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI48995001, Length=231, Percent_Identity=25.5411255411255, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI87081782, Length=199, Percent_Identity=30.6532663316583, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=523, Percent_Identity=27.151051625239, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17553372, Length=513, Percent_Identity=29.8245614035088, Blast_Score=145, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI17555318, Length=518, Percent_Identity=25.4826254826255, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI115533608, Length=254, Percent_Identity=27.1653543307087, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=546, Percent_Identity=27.1062271062271, Blast_Score=143, Evalue=6e-35,
Organism=Saccharomyces cerevisiae, GI6321121, Length=404, Percent_Identity=28.4653465346535, Blast_Score=140, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6323278, Length=349, Percent_Identity=29.2263610315186, Blast_Score=107, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=348, Percent_Identity=29.3103448275862, Blast_Score=103, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6325030, Length=358, Percent_Identity=27.6536312849162, Blast_Score=97, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6322640, Length=218, Percent_Identity=29.3577981651376, Blast_Score=70, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6324985, Length=223, Percent_Identity=25.5605381165919, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24642252, Length=561, Percent_Identity=27.2727272727273, Blast_Score=169, Evalue=7e-42,
Organism=Drosophila melanogaster, GI18859989, Length=561, Percent_Identity=27.2727272727273, Blast_Score=169, Evalue=7e-42,
Organism=Drosophila melanogaster, GI24641342, Length=546, Percent_Identity=27.1062271062271, Blast_Score=162, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24666836, Length=542, Percent_Identity=28.0442804428044, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI85725262, Length=167, Percent_Identity=31.7365269461078, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR007406 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 65690; Mature: 65558

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPLVLLQDIHLRFGATPLLDGAELSVAPGERLCLVGRNGSGKSTLLKVAAGLLEPDDG
CCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCC
TRFFQPGATVRYLPQEPDFTGFATTLAYVEAGLGPGDDHYRAQYLLEQLGLTGQEDPAHL
CEEECCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
SGGEARRAALARVIAPEPDVLMLDEPTNHLDLPAIEWLESELKSLRSALVLISHDRRFLE
CCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
NLSRATVWLDRGTTRRLDQGFGAFEAWRDQVLEQEETERHKLDRKIVAELDWLRYGVTAR
HHHHHEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RKRNVRRLGDLHAMRKDRREVRRAQGNVKITVTEAETSGKLVIEARAIAKAFDGVSVVRD
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHH
FSTRIARGDRIGIVGPNGAGKTTLLKMLIGTLKPDSGSVKLGSNLEIASLDQKRAALRPE
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEECCCHHHHHCCCC
TTLRDALTGGGSDTVMVGGQPKHVMGYLKDFLFTPEQANSPLSVLSGGERGRLMLARALA
HHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHH
LPSNLLVLDEPTNDLDLETLDLLQEMVADYPGTVILVSHDRDFLDRTVTSVIAAEGDGVF
CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCH
SEYAGGYSDMVNQRGHGVEAKAKAKAEGKASPAAAPAAGKPKETKRRLSFAEKHALETLP
HHHCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KTLDKLRVDAAVLEKKIADPNLYAKDPAAFEKASTALGKIHADIEAAEEEWLRLEILKEE
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGG
HCC
>Mature Secondary Structure 
APPLVLLQDIHLRFGATPLLDGAELSVAPGERLCLVGRNGSGKSTLLKVAAGLLEPDDG
CCCHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCC
TRFFQPGATVRYLPQEPDFTGFATTLAYVEAGLGPGDDHYRAQYLLEQLGLTGQEDPAHL
CEEECCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
SGGEARRAALARVIAPEPDVLMLDEPTNHLDLPAIEWLESELKSLRSALVLISHDRRFLE
CCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
NLSRATVWLDRGTTRRLDQGFGAFEAWRDQVLEQEETERHKLDRKIVAELDWLRYGVTAR
HHHHHEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RKRNVRRLGDLHAMRKDRREVRRAQGNVKITVTEAETSGKLVIEARAIAKAFDGVSVVRD
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHH
FSTRIARGDRIGIVGPNGAGKTTLLKMLIGTLKPDSGSVKLGSNLEIASLDQKRAALRPE
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEECCCHHHHHCCCC
TTLRDALTGGGSDTVMVGGQPKHVMGYLKDFLFTPEQANSPLSVLSGGERGRLMLARALA
HHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHH
LPSNLLVLDEPTNDLDLETLDLLQEMVADYPGTVILVSHDRDFLDRTVTSVIAAEGDGVF
CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCH
SEYAGGYSDMVNQRGHGVEAKAKAKAEGKASPAAAPAAGKPKETKRRLSFAEKHALETLP
HHHCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KTLDKLRVDAAVLEKKIADPNLYAKDPAAFEKASTALGKIHADIEAAEEEWLRLEILKEE
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGG
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Endonuclease; Excision [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11259647; 8150261 [H]