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The map label for this gene is dedA

Identifier: 158422086

GI number: 158422086

Start: 518055

End: 518684

Strand: Reverse

Name: dedA

Synonym: AZC_0462

Alternate gene names: NA

Gene position: 518684-518055 (Counterclockwise)

Preceding gene: 158422088

Following gene: 158422083

Centisome position: 9.66

GC content: 65.71

Gene sequence:

>630_bases
ATGCCCGCACCGGCTTTCGCCGGCCTGACCTCCAGCCCTGATGTCTCCATGATCCGCAAGCTCTATGACTGGGTGCTCGC
CTATTCGGCGCGTCCGTCCGCTCCCTGGGCGCTCGCCATCGTTGCCTTTGCGGAAAGCTCCATCTTTCCCGTGCCGCCCG
ACGTGCTGCAGGTGCCCATGTCGCTGGCGCGGCCGGACAAGGCCTGGCGCTATGCGCTGATTGCCACCATCGCCTCGGTG
CTCGGCGGCCTCGTGGGCTATGCCATCGGCGCCCTGCTCTATGACAGCCTCGGCCTGTGGCTCATCAATCTCTATGGCTA
TGGCCAGAAGGTTGACGCCTTCCGCGCCGCCTATGCCCATTACGGGCACTGGGTGATCCTGCTGAAGGGCCTCACGCCCA
TTCCCTACAAGCTCGTCACCATCACGTCGGGCTTTGCGGACTACAGCCTGTTCTGGTTCGTCGTCCTCTCGGTCATCACC
CGCGGTGCCCGCTTCTTCCTGCTGGCCGCGCTGCTGCACTATTTCGGCCCCGCCGCCCGCGACTTCATCGAGCGCCGCCT
CGGCCTCGTGACGCTGGGCCTTCTGGCCATCGTGGTGCTGGGCCTCGTGGCGGCGGCCTATCTAGTCTGA

Upstream 100 bases:

>100_bases
GCATGGGAGCCTTGCCCGGGGCGCTGGACAGGGCGCACGCCCCCGTCTAGAGCCTGACCCCGGAACCCATGCGCCGGGCT
GCCGCCCGCCCGCACGTGCC

Downstream 100 bases:

>100_bases
GGAAGCGCCGCGCCGGGCCCGGAACGCACCATCGGAAATGCAAACGGCCGGGCAAACGCCCGGCCGTTTCGTTTCAGAAG
GTGCCGCAGGTCAGCGCGGC

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MPAPAFAGLTSSPDVSMIRKLYDWVLAYSARPSAPWALAIVAFAESSIFPVPPDVLQVPMSLARPDKAWRYALIATIASV
LGGLVGYAIGALLYDSLGLWLINLYGYGQKVDAFRAAYAHYGHWVILLKGLTPIPYKLVTITSGFADYSLFWFVVLSVIT
RGARFFLLAALLHYFGPAARDFIERRLGLVTLGLLAIVVLGLVAAAYLV

Sequences:

>Translated_209_residues
MPAPAFAGLTSSPDVSMIRKLYDWVLAYSARPSAPWALAIVAFAESSIFPVPPDVLQVPMSLARPDKAWRYALIATIASV
LGGLVGYAIGALLYDSLGLWLINLYGYGQKVDAFRAAYAHYGHWVILLKGLTPIPYKLVTITSGFADYSLFWFVVLSVIT
RGARFFLLAALLHYFGPAARDFIERRLGLVTLGLLAIVVLGLVAAAYLV
>Mature_208_residues
PAPAFAGLTSSPDVSMIRKLYDWVLAYSARPSAPWALAIVAFAESSIFPVPPDVLQVPMSLARPDKAWRYALIATIASVL
GGLVGYAIGALLYDSLGLWLINLYGYGQKVDAFRAAYAHYGHWVILLKGLTPIPYKLVTITSGFADYSLFWFVVLSVITR
GARFFLLAALLHYFGPAARDFIERRLGLVTLGLLAIVVLGLVAAAYLV

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22740; Mature: 22609

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPAFAGLTSSPDVSMIRKLYDWVLAYSARPSAPWALAIVAFAESSIFPVPPDVLQVPM
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH
SLARPDKAWRYALIATIASVLGGLVGYAIGALLYDSLGLWLINLYGYGQKVDAFRAAYAH
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YGHWVILLKGLTPIPYKLVTITSGFADYSLFWFVVLSVITRGARFFLLAALLHYFGPAAR
HHHHHEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHH
DFIERRLGLVTLGLLAIVVLGLVAAAYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PAPAFAGLTSSPDVSMIRKLYDWVLAYSARPSAPWALAIVAFAESSIFPVPPDVLQVPM
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH
SLARPDKAWRYALIATIASVLGGLVGYAIGALLYDSLGLWLINLYGYGQKVDAFRAAYAH
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YGHWVILLKGLTPIPYKLVTITSGFADYSLFWFVVLSVITRGARFFLLAALLHYFGPAAR
HHHHHEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHH
DFIERRLGLVTLGLLAIVVLGLVAAAYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478068 [H]