| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is tag [H]
Identifier: 158422026
GI number: 158422026
Start: 454555
End: 455142
Strand: Direct
Name: tag [H]
Synonym: AZC_0402
Alternate gene names: 158422026
Gene position: 454555-455142 (Clockwise)
Preceding gene: 158422025
Following gene: 158422029
Centisome position: 8.47
GC content: 66.67
Gene sequence:
>588_bases GTGAGCGCTGATCGTATTCTGACGCCGCATAGCGACGGCAAGTGCCGCTGCCCCTGGTGCGGCACCGATCCGCTCTATGT GGCCTATCACGACACCGAATGGGGCGTGCCCGAGCGCGACTCGCGCGCGCTGTTCGAGAAGCTGCTGCTGGACGGTTTCC AGGCCGGGCTTGCCTGGATCACCATCCTGCGCAAGCGCGACAATTTCCGCCGCGCCTTCGACGGCTTTGAGCCGGAGGTG ATCGCCGCCTATGGGCCGGAGAAGGTCGCGGCGCTGATGGCGGACGCCGGCATCGTGCGCAACCGGGCCAAGATCGAAGG CGCGGTGCTCTCCGCCCGCGCCTATCTGGATCTTCGGGAGAAGGGCATCGCCTTCTCCGATTTCATGTGGGAGGCGGTGG ACGGCACCGTGCAGGTGAACCGCCCCCGTACCCTCAAGGACATTCCCGCCGAGACGCCTGCCTCCCGCGCGCTCTCCAAG AAATTGAAGGCGGCGGGCTTCAAATTCTGCGGCCCCACCATCGTCTACGCCGCCATGCAGGCCTGCGGCCTCGTGGACGA CCATCTGGCGGAGTGCTGGCGGGCTTAG
Upstream 100 bases:
>100_bases GCGCGGCGGAGGCGAAGGCCAGCGGCCTGCCGCTGTTGGCGGGCGATGTGGAAGTGACCCTGAAGGCGCCCGACTGGGCG AGCTTCGACATGGAGGGCGT
Downstream 100 bases:
>100_bases CCCGTTGGCGTGAGCTCGGGTATTGCCCGCTGCGGCCGGAACTGCCGCAAAGCCGCGAGGGCGGCGAGCGTCACCAGAGC GCAGGCGGTGGCGAGAAGCA
Product: DNA-3-methyladenine glycosylase I
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSADRILTPHSDGKCRCPWCGTDPLYVAYHDTEWGVPERDSRALFEKLLLDGFQAGLAWITILRKRDNFRRAFDGFEPEV IAAYGPEKVAALMADAGIVRNRAKIEGAVLSARAYLDLREKGIAFSDFMWEAVDGTVQVNRPRTLKDIPAETPASRALSK KLKAAGFKFCGPTIVYAAMQACGLVDDHLAECWRA
Sequences:
>Translated_195_residues MSADRILTPHSDGKCRCPWCGTDPLYVAYHDTEWGVPERDSRALFEKLLLDGFQAGLAWITILRKRDNFRRAFDGFEPEV IAAYGPEKVAALMADAGIVRNRAKIEGAVLSARAYLDLREKGIAFSDFMWEAVDGTVQVNRPRTLKDIPAETPASRALSK KLKAAGFKFCGPTIVYAAMQACGLVDDHLAECWRA >Mature_194_residues SADRILTPHSDGKCRCPWCGTDPLYVAYHDTEWGVPERDSRALFEKLLLDGFQAGLAWITILRKRDNFRRAFDGFEPEVI AAYGPEKVAALMADAGIVRNRAKIEGAVLSARAYLDLREKGIAFSDFMWEAVDGTVQVNRPRTLKDIPAETPASRALSKK LKAAGFKFCGPTIVYAAMQACGLVDDHLAECWRA
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=177, Percent_Identity=54.2372881355932, Blast_Score=207, Evalue=5e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 21638; Mature: 21507
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADRILTPHSDGKCRCPWCGTDPLYVAYHDTEWGVPERDSRALFEKLLLDGFQAGLAWI CCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TILRKRDNFRRAFDGFEPEVIAAYGPEKVAALMADAGIVRNRAKIEGAVLSARAYLDLRE HHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGIAFSDFMWEAVDGTVQVNRPRTLKDIPAETPASRALSKKLKAAGFKFCGPTIVYAAMQ CCCCHHHHHHHHCCCEEEECCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH ACGLVDDHLAECWRA HHCCHHHHHHHHHCC >Mature Secondary Structure SADRILTPHSDGKCRCPWCGTDPLYVAYHDTEWGVPERDSRALFEKLLLDGFQAGLAWI CCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TILRKRDNFRRAFDGFEPEVIAAYGPEKVAALMADAGIVRNRAKIEGAVLSARAYLDLRE HHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGIAFSDFMWEAVDGTVQVNRPRTLKDIPAETPASRALSKKLKAAGFKFCGPTIVYAAMQ CCCCHHHHHHHHCCCEEEECCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH ACGLVDDHLAECWRA HHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3536912; 3520491; 8041620; 9278503 [H]