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The map label for this gene is ygfZ [C]

Identifier: 158422025

GI number: 158422025

Start: 453713

End: 454558

Strand: Direct

Name: ygfZ [C]

Synonym: AZC_0401

Alternate gene names: 158422025

Gene position: 453713-454558 (Clockwise)

Preceding gene: 158422024

Following gene: 158422026

Centisome position: 8.45

GC content: 69.98

Gene sequence:

>846_bases
ATGGCCCACGCCTTTCTGCCCGAGCGCGCCGTCCTCGCCGTCTCCGGCCCCGACGCCCGCGCCTTCCTGCACAACGTCGT
CACCTGCAACATCAACAGCCTGAAGCCCGGCGGCGCCCGCTATGGCGCGCTGCTGATGCCGCAGGGCAAGATCATCTCCG
ACTTCCTCATCTATGCCCCGGTGGCGACGCCCGAGACGCTGCTGCTGGACCTGCCGGCGGCGCGGCTGGAGGATCTGGTG
AAGCGCTTCACCATGTATCGCCTGCGCGCCAATGTCGGGTTCGAGCCACAGGCCGACAGCGCCATTGTCGCCTTCTGGGG
CGATGAGGCCGCACCGGAGGGCGTCGAGGCCTTCCCCGATCCGCGCCTTGATGAACTCGGCACCCGCGCCGTCGTGCTCC
GCGCCACTGCCGAGGGGCTGGGCGGCGATGCTTTCGCTTATGCCGCCCACCGCATTGCGCTCGGAATCCCGGAGGGCGGT
GCCGATTTCCTTTATGGCGACGCCTTCCCCCATGAGGCGGACATGGACCAGCTCGGCGGCGTGGACTTCAAGAAGGGCTG
CTACATCGGGCAGGAAGTGGTTTCGCGCACCCAGCATCGCGGCATCGCCCGCACGCGCACCGTGGCGGCCCTGCTCGCCG
GGGCGCCGGAGAGCGGCACCGAGATCAAGGCCGGCGAGAAGACCGTCGGCCGCATCGGCTCCATCGCCGGCGGGCAGGGC
ATCGCTCTCGTGCGCCTCGACCGCGCGGCGGAGGCGAAGGCCAGCGGCCTGCCGCTGTTGGCGGGCGATGTGGAAGTGAC
CCTGAAGGCGCCCGACTGGGCGAGCTTCGACATGGAGGGCGTGTGA

Upstream 100 bases:

>100_bases
TATGATGGCCTGAACGGCCCGTGCTCCGGCGCGGGTGCCTTTTCGTCACCCGGCGCCCATGCGGACTTTCGCATCGGGCC
TGCCGACCAGGGACATGGCC

Downstream 100 bases:

>100_bases
GCGCTGATCGTATTCTGACGCCGCATAGCGACGGCAAGTGCCGCTGCCCCTGGTGCGGCACCGATCCGCTCTATGTGGCC
TATCACGACACCGAATGGGG

Product: glycine cleavage T protein

Products: NA

Alternate protein names: Aminomethyltransferase; Aminomethyl Transferase Family Protein; Glycine Cleavage T-Protein; Aminomethyltransferase Protein; Glycine Cleavage System T Protein Aminomethyltransferase; Glycine Cleavage T-Protein Barrel; Aminomethyl Transferase; Aminomethyltransferase Family Protein; Glycine Cleavage T-Protein C-Terminal Barrel; TRNA-Modifying Protein YgfZ; Aminomethyltransferase Related GcvT; Glycine Cleavage System T Protein; GcvT-Like Aminomethyltransferase Protein; Glycine Cleavage T-Protein Superfamily Protein; GcvT-Like Aminomethyltransferase

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MAHAFLPERAVLAVSGPDARAFLHNVVTCNINSLKPGGARYGALLMPQGKIISDFLIYAPVATPETLLLDLPAARLEDLV
KRFTMYRLRANVGFEPQADSAIVAFWGDEAAPEGVEAFPDPRLDELGTRAVVLRATAEGLGGDAFAYAAHRIALGIPEGG
ADFLYGDAFPHEADMDQLGGVDFKKGCYIGQEVVSRTQHRGIARTRTVAALLAGAPESGTEIKAGEKTVGRIGSIAGGQG
IALVRLDRAAEAKASGLPLLAGDVEVTLKAPDWASFDMEGV

Sequences:

>Translated_281_residues
MAHAFLPERAVLAVSGPDARAFLHNVVTCNINSLKPGGARYGALLMPQGKIISDFLIYAPVATPETLLLDLPAARLEDLV
KRFTMYRLRANVGFEPQADSAIVAFWGDEAAPEGVEAFPDPRLDELGTRAVVLRATAEGLGGDAFAYAAHRIALGIPEGG
ADFLYGDAFPHEADMDQLGGVDFKKGCYIGQEVVSRTQHRGIARTRTVAALLAGAPESGTEIKAGEKTVGRIGSIAGGQG
IALVRLDRAAEAKASGLPLLAGDVEVTLKAPDWASFDMEGV
>Mature_280_residues
AHAFLPERAVLAVSGPDARAFLHNVVTCNINSLKPGGARYGALLMPQGKIISDFLIYAPVATPETLLLDLPAARLEDLVK
RFTMYRLRANVGFEPQADSAIVAFWGDEAAPEGVEAFPDPRLDELGTRAVVLRATAEGLGGDAFAYAAHRIALGIPEGGA
DFLYGDAFPHEADMDQLGGVDFKKGCYIGQEVVSRTQHRGIARTRTVAALLAGAPESGTEIKAGEKTVGRIGSIAGGQGI
ALVRLDRAAEAKASGLPLLAGDVEVTLKAPDWASFDMEGV

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58197556, Length=269, Percent_Identity=30.8550185873606, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71985951, Length=269, Percent_Identity=28.2527881040892, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24645123, Length=304, Percent_Identity=29.2763157894737, Blast_Score=105, Evalue=3e-23,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29580; Mature: 29449

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHAFLPERAVLAVSGPDARAFLHNVVTCNINSLKPGGARYGALLMPQGKIISDFLIYAP
CCCCCCCCCEEEEEECCCHHHHHHHEEEEEECCCCCCCCCCCEEECCCCCHHHHHHEEEC
VATPETLLLDLPAARLEDLVKRFTMYRLRANVGFEPQADSAIVAFWGDEAAPEGVEAFPD
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PRLDELGTRAVVLRATAEGLGGDAFAYAAHRIALGIPEGGADFLYGDAFPHEADMDQLGG
CCHHHHCCEEEEEEEECCCCCCCHHHHHHEEEEEECCCCCCCCEECCCCCCCCCHHHHCC
VDFKKGCYIGQEVVSRTQHRGIARTRTVAALLAGAPESGTEIKAGEKTVGRIGSIAGGQG
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC
IALVRLDRAAEAKASGLPLLAGDVEVTLKAPDWASFDMEGV
EEEEEECCHHHHHHCCCCEEECCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AHAFLPERAVLAVSGPDARAFLHNVVTCNINSLKPGGARYGALLMPQGKIISDFLIYAP
CCCCCCCCEEEEEECCCHHHHHHHEEEEEECCCCCCCCCCCEEECCCCCHHHHHHEEEC
VATPETLLLDLPAARLEDLVKRFTMYRLRANVGFEPQADSAIVAFWGDEAAPEGVEAFPD
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PRLDELGTRAVVLRATAEGLGGDAFAYAAHRIALGIPEGGADFLYGDAFPHEADMDQLGG
CCHHHHCCEEEEEEEECCCCCCCHHHHHHEEEEEECCCCCCCCEECCCCCCCCCHHHHCC
VDFKKGCYIGQEVVSRTQHRGIARTRTVAALLAGAPESGTEIKAGEKTVGRIGSIAGGQG
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC
IALVRLDRAAEAKASGLPLLAGDVEVTLKAPDWASFDMEGV
EEEEEECCHHHHHHCCCCEEECCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA