| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158421988
Identifier: 158421988
GI number: 158421988
Start: 417458
End: 417688
Strand: Reverse
Name: 158421988
Synonym: AZC_0364
Alternate gene names: NA
Gene position: 417688-417458 (Counterclockwise)
Preceding gene: 158421991
Following gene: 158421987
Centisome position: 7.78
GC content: 55.41
Gene sequence:
>231_bases ATGACGCCTGAACAGTGCCGTGCAGCAAGGGCTTGGATTGACTGGTCGCAAGACGATCTTGCGCGCGCGGCCAGCGTTTC CCTATCGACCGTCCGCGACTTTGAGAAGGGGCGCCGCGTTCCGATAGCAAACAATCTATCGGCAATGAGAGCTGCTCTGG AAAAACAGGGAATTTCATTTTTCGACCGCGAAGGGTCATCGGGCATAGCATCCCAGGCTCAGTGCAATTAA
Upstream 100 bases:
>100_bases CAACGATTTGCGTTGACCTCAGTGATAATGGCGTAAAGAGTTGGCGTCAACGAAAAACGTTGGGGTTGACCAAAAATGAT TTCGCGCTTAAGCGGAACGG
Downstream 100 bases:
>100_bases TTGCAACTGGACGGAATCCAGAGATTCCACTAATTTAAATAGGTCGGCGCACCGAGCTTTTGCCCAGTGCGCCGATGGTG GAGCTAGAGGGACTTGCACC
Product: transcriptional regulator
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MTPEQCRAARAWIDWSQDDLARAASVSLSTVRDFEKGRRVPIANNLSAMRAALEKQGISFFDREGSSGIASQAQCN
Sequences:
>Translated_76_residues MTPEQCRAARAWIDWSQDDLARAASVSLSTVRDFEKGRRVPIANNLSAMRAALEKQGISFFDREGSSGIASQAQCN >Mature_75_residues TPEQCRAARAWIDWSQDDLARAASVSLSTVRDFEKGRRVPIANNLSAMRAALEKQGISFFDREGSSGIASQAQCN
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8345; Mature: 8214
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEQCRAARAWIDWSQDDLARAASVSLSTVRDFEKGRRVPIANNLSAMRAALEKQGISF CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC FDREGSSGIASQAQCN CCCCCCCCCCCCCCCC >Mature Secondary Structure TPEQCRAARAWIDWSQDDLARAASVSLSTVRDFEKGRRVPIANNLSAMRAALEKQGISF CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC FDREGSSGIASQAQCN CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA