| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is fur [C]
Identifier: 158421991
GI number: 158421991
Start: 423088
End: 423630
Strand: Reverse
Name: fur [C]
Synonym: AZC_0367
Alternate gene names: 158421991
Gene position: 423630-423088 (Counterclockwise)
Preceding gene: 158421993
Following gene: 158421988
Centisome position: 7.89
GC content: 65.56
Gene sequence:
>543_bases ATGAACGAGATGACTCGAATCCGTACGAGCCTGGGTTCCGGCGCCGCCCGTGTCCAGGTGGACCCTGAAGAGGCCGTGCT GCCCGTGGCGCAGCTGCGCGACGTAAACAATGCGCGCCGCACCGGCTGCCCGTTCCACGACGTGCGCGAGATGCTCCGTG AGGTCGGCCTGCGTCCCACCCGTCAGCGTCTGGCGCTGGGCTGGCTTCTATTCGCCAAGGGTGACCGCCACGTGACGGCC GAAATGCTGCACGAGGAAGCCATCCGCGCCCGCTTCCCGGTGTCGCTCGCCACGGTTTACAATACGCTGCACCAGTTCAC GGAAGTGAGCCTGCTGCGCGAGGTCGCTGTTGACGGGTCGAAGACCTATTTCGACACCAACTCCTCCGACCACCACCATT TCTATGTCGAGGGCCACAACGAGCTCGTCGACATTCCGGAGGCCTCCGTCACCGTGGACCGCCTGCCGGAAGCCCCCGAG GGCTTCGAGGTGGCGCGTGTGGACGTGGTGGTGCGCCTGCGCAAGAAGAGTGCCAAGGCCTGA
Upstream 100 bases:
>100_bases ATGAGGCGCGGGATCAGGTATAGCTGAAAAATGATCGCCGCCTCACAGTGGCTCCCCCAGCAGCAATGCGATTGCATAGA TTGAGATTGCTAGCGCGACC
Downstream 100 bases:
>100_bases GGCGCAGCCGGCCTCCCGCCGGCGCAAAAGAGAAATCAGACCCCGTGCCGGTGACGGCGCGGGGTTTTTCTTTGCCCGGC GGTCAGCAGGCCGCGCAAGA
Product: Fe2+/Zn2+ uptake regulation protein
Products: NA
Alternate protein names: Ferric Uptake Regulator Fur Family; Transcriptional Regulator Fur Family; FUR Family Transcriptional Regulator; Ferric-Uptake Regulator; Iron Response Regulator; Fe2+/Zn2+ Uptake Regulation Protein; Ferric Uptake Regulator; Fur Family Transcriptional Regulator; Fur Family Ferric Uptake Regulator; Ferric Uptake Regulator FUR Family; Transcriptional Regulator; Ferric Uptake Transcriptional Regulator; Transcriptional Regulator Fur Family Protein; Iron Response Regulator Irr; Transcription Regulator; Iron Transcriptional Regulator Protein
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MNEMTRIRTSLGSGAARVQVDPEEAVLPVAQLRDVNNARRTGCPFHDVREMLREVGLRPTRQRLALGWLLFAKGDRHVTA EMLHEEAIRARFPVSLATVYNTLHQFTEVSLLREVAVDGSKTYFDTNSSDHHHFYVEGHNELVDIPEASVTVDRLPEAPE GFEVARVDVVVRLRKKSAKA
Sequences:
>Translated_180_residues MNEMTRIRTSLGSGAARVQVDPEEAVLPVAQLRDVNNARRTGCPFHDVREMLREVGLRPTRQRLALGWLLFAKGDRHVTA EMLHEEAIRARFPVSLATVYNTLHQFTEVSLLREVAVDGSKTYFDTNSSDHHHFYVEGHNELVDIPEASVTVDRLPEAPE GFEVARVDVVVRLRKKSAKA >Mature_180_residues MNEMTRIRTSLGSGAARVQVDPEEAVLPVAQLRDVNNARRTGCPFHDVREMLREVGLRPTRQRLALGWLLFAKGDRHVTA EMLHEEAIRARFPVSLATVYNTLHQFTEVSLLREVAVDGSKTYFDTNSSDHHHFYVEGHNELVDIPEASVTVDRLPEAPE GFEVARVDVVVRLRKKSAKA
Specific function: Acts As A Global Negative Controlling Element, Employing Fe(2+) As A Cofactor To Bind The Operator Of The Repressed Genes. Regulates The Expression Of Several Outer-Membrane Proteins Including The Iron Transport Operon. [C]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20310; Mature: 20310
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEMTRIRTSLGSGAARVQVDPEEAVLPVAQLRDVNNARRTGCPFHDVREMLREVGLRPT CCHHHHHHHHHCCCCEEEEECHHHHHCCHHHHHCCCCHHHCCCCHHHHHHHHHHCCCCCC RQRLALGWLLFAKGDRHVTAEMLHEEAIRARFPVSLATVYNTLHQFTEVSLLREVAVDGS HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC KTYFDTNSSDHHHFYVEGHNELVDIPEASVTVDRLPEAPEGFEVARVDVVVRLRKKSAKA CEEEECCCCCCEEEEEECCCCEEECCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNEMTRIRTSLGSGAARVQVDPEEAVLPVAQLRDVNNARRTGCPFHDVREMLREVGLRPT CCHHHHHHHHHCCCCEEEEECHHHHHCCHHHHHCCCCHHHCCCCHHHHHHHHHHCCCCCC RQRLALGWLLFAKGDRHVTAEMLHEEAIRARFPVSLATVYNTLHQFTEVSLLREVAVDGS HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC KTYFDTNSSDHHHFYVEGHNELVDIPEASVTVDRLPEAPEGFEVARVDVVVRLRKKSAKA CEEEECCCCCCEEEEEECCCCEEECCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA