| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158421884
Identifier: 158421884
GI number: 158421884
Start: 305401
End: 306096
Strand: Reverse
Name: 158421884
Synonym: AZC_0260
Alternate gene names: NA
Gene position: 306096-305401 (Counterclockwise)
Preceding gene: 158421885
Following gene: 158421883
Centisome position: 5.7
GC content: 71.84
Gene sequence:
>696_bases GTGCGCCTGCTCGTGACCCGCCCGCAACCGGGCGCCGGCGACACCGCCCGGCGTCTTGCGGCGCTGGGTCACGATGCGAT CGTGGACCCCATGCTGCGGGTGGCGCAAACCCACGCGCCTTTACCCACCGGCGATTTCACTGCCATCGCCTTCACCAGCG TGAATGGCGTGAAGGCGCTTGCCGCCCACGCGGAGAAGACCCGTGTACGGCATCTGCCCGCCTTCGCCGTGGGCAGCCGC ACCGCCCAGGCCGCCCGCGCGGCCGGCTTCGCGGACGTGACCGACTGCGCCGGCGATGTGATCGCGCTCGGCACGGCACT CAAGGCCCTGCCACCGGGCAGCCGCGTGCTCCATGCGGCAGGCGCGGAGCGGGCGGGCGATCTGGAAGGCGACCTCGCGC CGGCCGGCATCAGCCTCGCCCTTGCGGTTCTCTACCGCACCCTCCCCGCCGATCAGCTCGCGCCGGAGACGCTCGCCGCC CTCAAGAGCGGCGCGGTCGCGGCCGCGCTCCATTATTCCGCCCGCACGGTGGAGAGCCTGCTGGAGGCCACCGCACGCGG GGACGTGACCGGACCCTTTCTTGCGCTGCGGCAGTTATGCCTGTCCCATGCGGTGGCGGCCCCGCTGCGGGCGCTGGGGG CGACAACAGAGGTCTCACAAACTCCCGATGAGGACGCGCTGCTGACTTTGCTATAA
Upstream 100 bases:
>100_bases GGACGAGACGGCCCCGGTCTCTGACGCCGCCCGGCTGGGCGCGGACATGGGCGCGCGGTTGCGCGCGACGGCTCCCGCCC GCGCGCTGGGGCTCTAGGGC
Downstream 100 bases:
>100_bases GGCTTCTAGGAAACGTGCCGTTCGCTCAGCGAAGGCGGATGAAACAAGGTGGTGAGCGGGCGCCGGCCGCCCCGAAGCCG CCTGAATCAGAGCGACGGAT
Product: uroporphyrinogen-III synthase
Products: uroporphyrinogen III; H2O
Alternate protein names: Uroporphyrinogen III Synthase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MRLLVTRPQPGAGDTARRLAALGHDAIVDPMLRVAQTHAPLPTGDFTAIAFTSVNGVKALAAHAEKTRVRHLPAFAVGSR TAQAARAAGFADVTDCAGDVIALGTALKALPPGSRVLHAAGAERAGDLEGDLAPAGISLALAVLYRTLPADQLAPETLAA LKSGAVAAALHYSARTVESLLEATARGDVTGPFLALRQLCLSHAVAAPLRALGATTEVSQTPDEDALLTLL
Sequences:
>Translated_231_residues MRLLVTRPQPGAGDTARRLAALGHDAIVDPMLRVAQTHAPLPTGDFTAIAFTSVNGVKALAAHAEKTRVRHLPAFAVGSR TAQAARAAGFADVTDCAGDVIALGTALKALPPGSRVLHAAGAERAGDLEGDLAPAGISLALAVLYRTLPADQLAPETLAA LKSGAVAAALHYSARTVESLLEATARGDVTGPFLALRQLCLSHAVAAPLRALGATTEVSQTPDEDALLTLL >Mature_231_residues MRLLVTRPQPGAGDTARRLAALGHDAIVDPMLRVAQTHAPLPTGDFTAIAFTSVNGVKALAAHAEKTRVRHLPAFAVGSR TAQAARAAGFADVTDCAGDVIALGTALKALPPGSRVLHAAGAERAGDLEGDLAPAGISLALAVLYRTLPADQLAPETLAA LKSGAVAAALHYSARTVESLLEATARGDVTGPFLALRQLCLSHAVAAPLRALGATTEVSQTPDEDALLTLL
Specific function: Unknown
COG id: COG1587
COG function: function code H; Uroporphyrinogen-III synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.75
Molecular weight: Translated: 23535; Mature: 23535
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLVTRPQPGAGDTARRLAALGHDAIVDPMLRVAQTHAPLPTGDFTAIAFTSVNGVKAL CEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHH AAHAEKTRVRHLPAFAVGSRTAQAARAAGFADVTDCAGDVIALGTALKALPPGSRVLHAA HHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHC GAERAGDLEGDLAPAGISLALAVLYRTLPADQLAPETLAALKSGAVAAALHYSARTVESL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH LEATARGDVTGPFLALRQLCLSHAVAAPLRALGATTEVSQTPDEDALLTLL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC >Mature Secondary Structure MRLLVTRPQPGAGDTARRLAALGHDAIVDPMLRVAQTHAPLPTGDFTAIAFTSVNGVKAL CEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHH AAHAEKTRVRHLPAFAVGSRTAQAARAAGFADVTDCAGDVIALGTALKALPPGSRVLHAA HHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHC GAERAGDLEGDLAPAGISLALAVLYRTLPADQLAPETLAALKSGAVAAALHYSARTVESL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH LEATARGDVTGPFLALRQLCLSHAVAAPLRALGATTEVSQTPDEDALLTLL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: hydroxymethylbilane
Specific reaction: hydroxymethylbilane = uroporphyrinogen III + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA