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The map label for this gene is nodV [H]

Identifier: 158421817

GI number: 158421817

Start: 235606

End: 236682

Strand: Direct

Name: nodV [H]

Synonym: AZC_0193

Alternate gene names: 158421817

Gene position: 235606-236682 (Clockwise)

Preceding gene: 158421816

Following gene: 158421818

Centisome position: 4.39

GC content: 64.35

Gene sequence:

>1077_bases
ATGCTGGGTGCGACGCTATCACGGACCGTTTCTGTTTCCCGGTCCTGGGTCGTGCTCGCAATGCTGATCGCGCTGATGAC
CGCCATCTTCGTGGTCGACACGGTGACCAATTACGCCGTCGCGGCGGCCGTCCTCTATACGGCAGTCCAACTCATCGCCA
CGCGTTTCCTTTCGGTCCGAACGGTCATTATCCTGACGGGCGCCAGCATCGTTCTGACCCTCCTCAGTTTCGAACTCACC
CGCTCCGGCGCCTATGAAGTCGGCGTCGTCAACACCGCCATCAGCGTGGTCGTCATCGGCGTGACGGCCTATCTGGGCCT
GAAGCTCAAATCCGCGCAACAGTCGGCGGACGAAACGCGGGAGCGGCTGTTGCGCATGGCGCGCCTGATGACCCTCAGCC
AGTTGACCACCTCCATCGCACATGAGGTCAGCCAGCCGCTTGCCGGGATCGCCACCAGCGCCAGCGCCTCGCGCCGCTGG
CTGACCCAGCAGCCCCCGAACGTGGAAAGAGCCCTCGCTGCGATCGAACGGGTCGCAAGCGACGCCTGCCGCGCGAACGA
TGTCCTCGCTCGCGTGCGCGGCATGGCCCGGAGGGAGGCGACGAGCAAGGCCTCGTTTGATTTCAACGAGGCTGTTCGCG
AGGTTCTGGATCTCGCTGGCGGGGATATGCTTCGCACGGGGGCGCAAGTCTCCCTGTCACTGGCCGAGAATCTGCCGGCA
GCCTTCGCGGATCGCGTCCAGATCCAGCAGGTCATCGGCAATCTGGTTCTGAACGCCATGGAGGCCGTGTCGGCGCTTCC
CAACCGGCTGCCCAGATTGACCATTTCGACCGCGCTTGAACCGGCGGGGATGATCAGCTTCTCGATCTCCGACAATGGCC
CCGGGGTGTCCCCCGACACCGCGCAGCATCTATTCGATGCCTTCTGGACGACAAAGGAGCAAGGCTTTGGCCTCGGCCTG
ACCATCTGCCAGACGATCGTGGAGGCGAACGGCGGGCGCATCTGGATGCTTCCGGCCCCGCCAGAGGCGGGCGCAACGTT
CGTCTTCAACCTTCCGACAGCGGGTTCAGCGGCGTGA

Upstream 100 bases:

>100_bases
GCGAGGAACGGCTACCATTTGGCGCAGTTCGCCGAACGTAGTGGTGAAGGTAAAGCTGGCGCGGACAGGCGTCTGGGCGG
ACGCATGAAAAGGAGGGACC

Downstream 100 bases:

>100_bases
CCTCGTCAAACGATCCAAAGCCGGTCGTCTATATCGTTGACGACGATCACTCGGTACGAGCGGCGCTACAGGATCTGTTC
GCCTCGGTGACACTCGATGC

Product: sensor nodulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MLGATLSRTVSVSRSWVVLAMLIALMTAIFVVDTVTNYAVAAAVLYTAVQLIATRFLSVRTVIILTGASIVLTLLSFELT
RSGAYEVGVVNTAISVVVIGVTAYLGLKLKSAQQSADETRERLLRMARLMTLSQLTTSIAHEVSQPLAGIATSASASRRW
LTQQPPNVERALAAIERVASDACRANDVLARVRGMARREATSKASFDFNEAVREVLDLAGGDMLRTGAQVSLSLAENLPA
AFADRVQIQQVIGNLVLNAMEAVSALPNRLPRLTISTALEPAGMISFSISDNGPGVSPDTAQHLFDAFWTTKEQGFGLGL
TICQTIVEANGGRIWMLPAPPEAGATFVFNLPTAGSAA

Sequences:

>Translated_358_residues
MLGATLSRTVSVSRSWVVLAMLIALMTAIFVVDTVTNYAVAAAVLYTAVQLIATRFLSVRTVIILTGASIVLTLLSFELT
RSGAYEVGVVNTAISVVVIGVTAYLGLKLKSAQQSADETRERLLRMARLMTLSQLTTSIAHEVSQPLAGIATSASASRRW
LTQQPPNVERALAAIERVASDACRANDVLARVRGMARREATSKASFDFNEAVREVLDLAGGDMLRTGAQVSLSLAENLPA
AFADRVQIQQVIGNLVLNAMEAVSALPNRLPRLTISTALEPAGMISFSISDNGPGVSPDTAQHLFDAFWTTKEQGFGLGL
TICQTIVEANGGRIWMLPAPPEAGATFVFNLPTAGSAA
>Mature_358_residues
MLGATLSRTVSVSRSWVVLAMLIALMTAIFVVDTVTNYAVAAAVLYTAVQLIATRFLSVRTVIILTGASIVLTLLSFELT
RSGAYEVGVVNTAISVVVIGVTAYLGLKLKSAQQSADETRERLLRMARLMTLSQLTTSIAHEVSQPLAGIATSASASRRW
LTQQPPNVERALAAIERVASDACRANDVLARVRGMARREATSKASFDFNEAVREVLDLAGGDMLRTGAQVSLSLAENLPA
AFADRVQIQQVIGNLVLNAMEAVSALPNRLPRLTISTALEPAGMISFSISDNGPGVSPDTAQHLFDAFWTTKEQGFGLGL
TICQTIVEANGGRIWMLPAPPEAGATFVFNLPTAGSAA

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=245, Percent_Identity=28.9795918367347, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788549, Length=235, Percent_Identity=30.6382978723404, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788393, Length=147, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790346, Length=218, Percent_Identity=24.7706422018349, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789149, Length=292, Percent_Identity=25, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1786912, Length=136, Percent_Identity=33.8235294117647, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 37946; Mature: 37946

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGATLSRTVSVSRSWVVLAMLIALMTAIFVVDTVTNYAVAAAVLYTAVQLIATRFLSVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIILTGASIVLTLLSFELTRSGAYEVGVVNTAISVVVIGVTAYLGLKLKSAQQSADETR
HHHEECCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ERLLRMARLMTLSQLTTSIAHEVSQPLAGIATSASASRRWLTQQPPNVERALAAIERVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHH
DACRANDVLARVRGMARREATSKASFDFNEAVREVLDLAGGDMLRTGAQVSLSLAENLPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCH
AFADRVQIQQVIGNLVLNAMEAVSALPNRLPRLTISTALEPAGMISFSISDNGPGVSPDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCEEEEEECCCCCCCCCHH
AQHLFDAFWTTKEQGFGLGLTICQTIVEANGGRIWMLPAPPEAGATFVFNLPTAGSAA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MLGATLSRTVSVSRSWVVLAMLIALMTAIFVVDTVTNYAVAAAVLYTAVQLIATRFLSVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIILTGASIVLTLLSFELTRSGAYEVGVVNTAISVVVIGVTAYLGLKLKSAQQSADETR
HHHEECCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ERLLRMARLMTLSQLTTSIAHEVSQPLAGIATSASASRRWLTQQPPNVERALAAIERVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHH
DACRANDVLARVRGMARREATSKASFDFNEAVREVLDLAGGDMLRTGAQVSLSLAENLPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCH
AFADRVQIQQVIGNLVLNAMEAVSALPNRLPRLTISTALEPAGMISFSISDNGPGVSPDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCEEEEEECCCCCCCCCHH
AQHLFDAFWTTKEQGFGLGLTICQTIVEANGGRIWMLPAPPEAGATFVFNLPTAGSAA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]