| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is glk [H]
Identifier: 158421811
GI number: 158421811
Start: 221684
End: 222574
Strand: Direct
Name: glk [H]
Synonym: AZC_0187
Alternate gene names: 158421811
Gene position: 221684-222574 (Clockwise)
Preceding gene: 158421810
Following gene: 158421812
Centisome position: 4.13
GC content: 68.57
Gene sequence:
>891_bases ATGTCGACGCCGTCGGGAAATCGCAAGGTGAAGGTGGACCGCCTCGGGGAGCGCCTGCGCACGCGGGGGGCCTCCCTCTC GCCCAGCCTCAAAGCGGTAGCCGACTATATTGATGAGAACCGCCGCCTCGTCCTCAGCAAGTCCGCTTTGGACATTGCCG CTGAAACCGGGACGTCGGACGCGACCGTCATCCGCGCCATTCAGGCGCTGGGGTTTTCCGGCCTGCGGGAACTGAAGCGC ACGCTCTCCGCCCATCTGGGCGGGGTGATCCCCTCGGTGGACAAGATGTCCTCCACGACGGAGCAGCTTCAGCGCAGCGT CGATACTTCCATCGATTTCGTGCGGGACGGGCACCTCGCGGGCATCGAGAAGATCACCGCGCCCGAGAACCGGGTGGCCA TGGCCGCCGCCGTCGAACTGCTGCGCGGGGCGCAGGGCATCGGACTGTTCGGCATCGGCGCCTCGGCCATTCTCGCCGAT TACGCTGCCCGTCTGCTGATCCGCAACGGCCGCCATGCTTATGCACTGAACCGCACCGGCATCGGCCTTGGCGAGCAACT CCTCGCCATGCGCCGGGGGGACGTGCTCATCATGATGGGTCAGTCGAGCGCCCACCGGGAGGGTACGGCGGCGCTGGAAG AGGCGCGGCGCCTCGGCGTGCGCATGATCCTGCTGACGGGGGCCGCCGCGCCGGCCTTCGGCAAGCAGGCGGACGTGATC ATCCGCGTGCCGCGCGGCCGCTCCGAGCTGGTGCCCCTGCACGGGCTCGTGCTGATGGCGCTGGAGATGCTGGTGATAGG CCTTGCCGCCGTGGAGCCCGAGCGCTCCACCCAGTCGCTGGAGCGTCTGCACACCCTCTATGAGGACATCCGCAAGCCGC CGCGGGGGTGA
Upstream 100 bases:
>100_bases CTGAAGTTGGAGGCCGCAAGTGCCTGTGTCAGCATAACCGCAAAGCGCGCCGGCGGCCGAGCGCCGGAACAGCCCTCCGG GGCAGGAGCAGAAGGGGCGC
Downstream 100 bases:
>100_bases CCCCGGCCGGGTATCCGGCCCAGGCTTGCGGCTCATGATGAGCTCGCTGTGTGAAGAGGTGTCTATCGCCGCGATAACAA TTGTCAGCGATATGAAATGC
Product: transcriptional regulator
Products: NA
Alternate protein names: Glucokinase; Glucose kinase; Putative HTH-type transcriptional regulator [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSTPSGNRKVKVDRLGERLRTRGASLSPSLKAVADYIDENRRLVLSKSALDIAAETGTSDATVIRAIQALGFSGLRELKR TLSAHLGGVIPSVDKMSSTTEQLQRSVDTSIDFVRDGHLAGIEKITAPENRVAMAAAVELLRGAQGIGLFGIGASAILAD YAARLLIRNGRHAYALNRTGIGLGEQLLAMRRGDVLIMMGQSSAHREGTAALEEARRLGVRMILLTGAAAPAFGKQADVI IRVPRGRSELVPLHGLVLMALEMLVIGLAAVEPERSTQSLERLHTLYEDIRKPPRG
Sequences:
>Translated_296_residues MSTPSGNRKVKVDRLGERLRTRGASLSPSLKAVADYIDENRRLVLSKSALDIAAETGTSDATVIRAIQALGFSGLRELKR TLSAHLGGVIPSVDKMSSTTEQLQRSVDTSIDFVRDGHLAGIEKITAPENRVAMAAAVELLRGAQGIGLFGIGASAILAD YAARLLIRNGRHAYALNRTGIGLGEQLLAMRRGDVLIMMGQSSAHREGTAALEEARRLGVRMILLTGAAAPAFGKQADVI IRVPRGRSELVPLHGLVLMALEMLVIGLAAVEPERSTQSLERLHTLYEDIRKPPRG >Mature_295_residues STPSGNRKVKVDRLGERLRTRGASLSPSLKAVADYIDENRRLVLSKSALDIAAETGTSDATVIRAIQALGFSGLRELKRT LSAHLGGVIPSVDKMSSTTEQLQRSVDTSIDFVRDGHLAGIEKITAPENRVAMAAAVELLRGAQGIGLFGIGASAILADY AARLLIRNGRHAYALNRTGIGLGEQLLAMRRGDVLIMMGQSSAHREGTAALEEARRLGVRMILLTGAAAPAFGKQADVII RVPRGRSELVPLHGLVLMALEMLVIGLAAVEPERSTQSLERLHTLYEDIRKPPRG
Specific function: Unknown
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003836 - InterPro: IPR000843 - InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF02685 Glucokinase; PF01418 HTH_6; PF01380 SIS [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 31722; Mature: 31591
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPSGNRKVKVDRLGERLRTRGASLSPSLKAVADYIDENRRLVLSKSALDIAAETGTSD CCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCH ATVIRAIQALGFSGLRELKRTLSAHLGGVIPSVDKMSSTTEQLQRSVDTSIDFVRDGHLA HHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH GIEKITAPENRVAMAAAVELLRGAQGIGLFGIGASAILADYAARLLIRNGRHAYALNRTG CHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCC IGLGEQLLAMRRGDVLIMMGQSSAHREGTAALEEARRLGVRMILLTGAAAPAFGKQADVI CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEE IRVPRGRSELVPLHGLVLMALEMLVIGLAAVEPERSTQSLERLHTLYEDIRKPPRG EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STPSGNRKVKVDRLGERLRTRGASLSPSLKAVADYIDENRRLVLSKSALDIAAETGTSD CCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCH ATVIRAIQALGFSGLRELKRTLSAHLGGVIPSVDKMSSTTEQLQRSVDTSIDFVRDGHLA HHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH GIEKITAPENRVAMAAAVELLRGAQGIGLFGIGASAILADYAARLLIRNGRHAYALNRTG CHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCC IGLGEQLLAMRRGDVLIMMGQSSAHREGTAALEEARRLGVRMILLTGAAAPAFGKQADVI CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEE IRVPRGRSELVPLHGLVLMALEMLVIGLAAVEPERSTQSLERLHTLYEDIRKPPRG EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA