| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158421812
Identifier: 158421812
GI number: 158421812
Start: 223492
End: 225831
Strand: Direct
Name: 158421812
Synonym: AZC_0188
Alternate gene names: NA
Gene position: 223492-225831 (Clockwise)
Preceding gene: 158421811
Following gene: 158421813
Centisome position: 4.16
GC content: 66.84
Gene sequence:
>2340_bases ATGGCCGGCGAATCCGCAACTCCTGCTCCGCTCCAGCCCGGAACGTGGGGCCAGCCAGGACATCAGGCCGCGCCGTGGAG CGGCGTCTTCGCCGAGGCGTGGAGCCGGGCTTTCACCGGCACGGCGCCGCTGCCGCCGGGGATCGGGACGCTGCCCGCGG GGCCGCTCGTGGACTATCTCGTGGACGCTGCGCAGCGCTCGGTCCTGTTCATCGACCTGATGCGTCGGCGCGGCAATGAG CAGCAGGACATCACCTCGCGCCCCATGGCGACCGTGCTCTCCTTCGATCATGACGTGCTGGTGAGCGGGCGGGCGCTGCC GCGGCCCATCAACTATTTCCTGTCCCGCATCGTGCCGCCGCCCGGCGCGAAGGTGGATCCCGACAAGCGTCCGGTGGTGG TGGTGGATCCCCGCGCCGGCCAGGGGCCGGGTATTGGCGGGTTCAAGACCCAGAGCGAAATCGGCGAGGCGCTGGCCAAC GGCCATCCCGTCTATTTCATCGGTTTCTCGGCCCAGCCGGAGCCCGGCCAGACCTTCCTCGACGTGGTGGAGGGGCAGGT CTCCTTCTTCGAGCGCATCGTGGCCATGCACCCCGATGCCCCCCGGCCGTTTGCCATCGGCAACTGTCAGGCCGGCTACC AGACACTCATGGTGGCCATGCTGCGGCCCGACCTGTTCGGCCCCTGCATGGTGGCCGGCTCGCCCATGTCCTATTGGCAG GGCGTCCACGGCAAGAATCCCATGCGCTATTCCGGCGGCCTGCTGGGCGGCTCGTGGCTCACCGCGCTGGTGAGCGATCT TGGGCGCGGCAAGTTCGACGGCACCTGGCTGATCCTCAACTTCGACAGCCTCAATCCGGCCAACTGGCTGTGGGGTAAGC AATACGATCTCTATGCGGCGGTCGATACCGAGGCACAGCGCTATCTGGGTTTCGAAAAGTGGTGGGGCGACTTCATCACC CTCAACGGCGACGAGATCCAGTTCCTGGTGGACGAACTGTTCATCGGCGACGGGCTCACGCGCAACGAGATGCGCTCCAG CGACGGGACGGTGTTCGACCTGCGCAACATCGCCTCGCCGCTGATCGTGTTCACGTCCCTCGGCGACAATATCAGCCCGC CGCCCCAGACGCTTGGCTGGATCCTCGACCTCTACAAGGACGTGGACGCCATCCACGCGGAGGGGCGCACCATCGTTTAC TGCCTGAACCAGACGGTCGGCCATCTCGCCATCTTCGTGTCTGCCAAGGTGGGGGCGAAGGAGGACGAGGAGATGGTCCG ATTGATGGACCTCATCGACTGCCTGCCGCCGGGCCTCTATGAACTTGTCATCTCGCCTGCCTCCGAAGAGGAGGTGAAGG CTGGCGGCCATCCCTGGCACAGCCGCTTCGAAGCGCGCAGCCTTGAGGACATCCGTGCCTTCGGCCGCAACAGCGTGGAG GACGACCGGGCCTTCGCAGCGGTGCGTCGGGTCTCGGAGATCAACCTGTCCCTTTATCGCACCTTCCTCCAGCCGGCGGT GCGGGCGCTGGCCAATCCGCACATGGCCGAACTGCTGTTCGCCACCAATCCGCTGCGCCTCAGCTACAGCCTTTTTGCGG ACTCGAACCCGTTCATGAAGCCGGTTGCCAAAGCTGCGGCCGAGGTGACGGCAGCGCGCAAGCCGGTGCCGCCGGACAAT CCCTTTCTCGCCGTCCAGAAGCTGTGGTCCGACCAGATCAGTGCCGGGCTCGATGCTTTCCGGGACTTGCGCGACCGCGC GGTCGAGCAGGCCTTCTTCGGCATTTACGGCTCGCCGGTGCTTCAGGGCATGCTGGGCTTGAACCTTGACGAGAAGGTGC GCGAGCTGCCGCCGACCAGCCCGCAAAAGCGCGCCTTCCTCACGCAGAAGATGGCCGAGTTCCGCGACCGCGTGGACGAG GGCGGGTTCAACGAAGCCCTGGTGCGGTCCGTCCTGTTCGTCATCGCCGCCGACCGGCAGTTGGACGAACGCTGTGCCGC GGCGCTGAAAGAAACGTGCCTGCGGCTGACGCAGCTTTCCATCTCGGATTTCAAGAGCCTGGTGCGCCGGCAGTTCTACA TCCTGCTGCTCGAGGGCATCGCTGCGGTCGAAGCCATCGCGACCCTCGTGCCCGACGGCGCCGCGCGACAGAGCCTCCTG AACGACGCTGCCGCAGTGGCGGGGGCCAACGGCACGCTCACCATCGGCGAGCAACAGAACATCGAGAAGCTGGCCGAGGT GCTGGGCGTTGCCGCGCCACACTCCCCCGCGCCGGTGCTGCCGGCCGACACGCACCGGTCCGCCCCCTCGACGCTTCAGA TCGCGCCCGCCGGCGCCTGA
Upstream 100 bases:
>100_bases GCAGTCTGGCACGTGAGACGTGGAGTAAATCGGGTCGCTGTGTTGGTTTGGCGTAGCGCCGATGCGTCCGTGATGCCCTG CAAACATCCGGGAGTTTCCC
Downstream 100 bases:
>100_bases AACGCAGGCCCGAACCGTCTTCTCCGGAGGCGCCACCGCCCGCACCCGCCACCGGCTGTCCAGTCCCGCGCCTGATCGAG GTCGGCCTCCGCCGTCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: ORFA [H]
Number of amino acids: Translated: 779; Mature: 778
Protein sequence:
>779_residues MAGESATPAPLQPGTWGQPGHQAAPWSGVFAEAWSRAFTGTAPLPPGIGTLPAGPLVDYLVDAAQRSVLFIDLMRRRGNE QQDITSRPMATVLSFDHDVLVSGRALPRPINYFLSRIVPPPGAKVDPDKRPVVVVDPRAGQGPGIGGFKTQSEIGEALAN GHPVYFIGFSAQPEPGQTFLDVVEGQVSFFERIVAMHPDAPRPFAIGNCQAGYQTLMVAMLRPDLFGPCMVAGSPMSYWQ GVHGKNPMRYSGGLLGGSWLTALVSDLGRGKFDGTWLILNFDSLNPANWLWGKQYDLYAAVDTEAQRYLGFEKWWGDFIT LNGDEIQFLVDELFIGDGLTRNEMRSSDGTVFDLRNIASPLIVFTSLGDNISPPPQTLGWILDLYKDVDAIHAEGRTIVY CLNQTVGHLAIFVSAKVGAKEDEEMVRLMDLIDCLPPGLYELVISPASEEEVKAGGHPWHSRFEARSLEDIRAFGRNSVE DDRAFAAVRRVSEINLSLYRTFLQPAVRALANPHMAELLFATNPLRLSYSLFADSNPFMKPVAKAAAEVTAARKPVPPDN PFLAVQKLWSDQISAGLDAFRDLRDRAVEQAFFGIYGSPVLQGMLGLNLDEKVRELPPTSPQKRAFLTQKMAEFRDRVDE GGFNEALVRSVLFVIAADRQLDERCAAALKETCLRLTQLSISDFKSLVRRQFYILLLEGIAAVEAIATLVPDGAARQSLL NDAAAVAGANGTLTIGEQQNIEKLAEVLGVAAPHSPAPVLPADTHRSAPSTLQIAPAGA
Sequences:
>Translated_779_residues MAGESATPAPLQPGTWGQPGHQAAPWSGVFAEAWSRAFTGTAPLPPGIGTLPAGPLVDYLVDAAQRSVLFIDLMRRRGNE QQDITSRPMATVLSFDHDVLVSGRALPRPINYFLSRIVPPPGAKVDPDKRPVVVVDPRAGQGPGIGGFKTQSEIGEALAN GHPVYFIGFSAQPEPGQTFLDVVEGQVSFFERIVAMHPDAPRPFAIGNCQAGYQTLMVAMLRPDLFGPCMVAGSPMSYWQ GVHGKNPMRYSGGLLGGSWLTALVSDLGRGKFDGTWLILNFDSLNPANWLWGKQYDLYAAVDTEAQRYLGFEKWWGDFIT LNGDEIQFLVDELFIGDGLTRNEMRSSDGTVFDLRNIASPLIVFTSLGDNISPPPQTLGWILDLYKDVDAIHAEGRTIVY CLNQTVGHLAIFVSAKVGAKEDEEMVRLMDLIDCLPPGLYELVISPASEEEVKAGGHPWHSRFEARSLEDIRAFGRNSVE DDRAFAAVRRVSEINLSLYRTFLQPAVRALANPHMAELLFATNPLRLSYSLFADSNPFMKPVAKAAAEVTAARKPVPPDN PFLAVQKLWSDQISAGLDAFRDLRDRAVEQAFFGIYGSPVLQGMLGLNLDEKVRELPPTSPQKRAFLTQKMAEFRDRVDE GGFNEALVRSVLFVIAADRQLDERCAAALKETCLRLTQLSISDFKSLVRRQFYILLLEGIAAVEAIATLVPDGAARQSLL NDAAAVAGANGTLTIGEQQNIEKLAEVLGVAAPHSPAPVLPADTHRSAPSTLQIAPAGA >Mature_778_residues AGESATPAPLQPGTWGQPGHQAAPWSGVFAEAWSRAFTGTAPLPPGIGTLPAGPLVDYLVDAAQRSVLFIDLMRRRGNEQ QDITSRPMATVLSFDHDVLVSGRALPRPINYFLSRIVPPPGAKVDPDKRPVVVVDPRAGQGPGIGGFKTQSEIGEALANG HPVYFIGFSAQPEPGQTFLDVVEGQVSFFERIVAMHPDAPRPFAIGNCQAGYQTLMVAMLRPDLFGPCMVAGSPMSYWQG VHGKNPMRYSGGLLGGSWLTALVSDLGRGKFDGTWLILNFDSLNPANWLWGKQYDLYAAVDTEAQRYLGFEKWWGDFITL NGDEIQFLVDELFIGDGLTRNEMRSSDGTVFDLRNIASPLIVFTSLGDNISPPPQTLGWILDLYKDVDAIHAEGRTIVYC LNQTVGHLAIFVSAKVGAKEDEEMVRLMDLIDCLPPGLYELVISPASEEEVKAGGHPWHSRFEARSLEDIRAFGRNSVED DRAFAAVRRVSEINLSLYRTFLQPAVRALANPHMAELLFATNPLRLSYSLFADSNPFMKPVAKAAAEVTAARKPVPPDNP FLAVQKLWSDQISAGLDAFRDLRDRAVEQAFFGIYGSPVLQGMLGLNLDEKVRELPPTSPQKRAFLTQKMAEFRDRVDEG GFNEALVRSVLFVIAADRQLDERCAAALKETCLRLTQLSISDFKSLVRRQFYILLLEGIAAVEAIATLVPDGAARQSLLN DAAAVAGANGTLTIGEQQNIEKLAEVLGVAAPHSPAPVLPADTHRSAPSTLQIAPAGA
Specific function: Unknown
COG id: COG3243
COG function: function code I; Poly(3-hydroxyalkanoate) synthetase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84750; Mature: 84618
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGESATPAPLQPGTWGQPGHQAAPWSGVFAEAWSRAFTGTAPLPPGIGTLPAGPLVDYL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH VDAAQRSVLFIDLMRRRGNEQQDITSRPMATVLSFDHDVLVSGRALPRPINYFLSRIVPP HHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCC PGAKVDPDKRPVVVVDPRAGQGPGIGGFKTQSEIGEALANGHPVYFIGFSAQPEPGQTFL CCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHH DVVEGQVSFFERIVAMHPDAPRPFAIGNCQAGYQTLMVAMLRPDLFGPCMVAGSPMSYWQ HHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHC GVHGKNPMRYSGGLLGGSWLTALVSDLGRGKFDGTWLILNFDSLNPANWLWGKQYDLYAA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEE VDTEAQRYLGFEKWWGDFITLNGDEIQFLVDELFIGDGLTRNEMRSSDGTVFDLRNIASP ECHHHHHHCCHHHHCCCEEEECCCHHHHHHHHHHHCCCCCHHHHCCCCCCEEEHHHHCCH LIVFTSLGDNISPPPQTLGWILDLYKDVDAIHAEGRTIVYCLNQTVGHLAIFVSAKVGAK HEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHEEEEEEECCCCC EDEEMVRLMDLIDCLPPGLYELVISPASEEEVKAGGHPWHSRFEARSLEDIRAFGRNSVE CHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC DDRAFAAVRRVSEINLSLYRTFLQPAVRALANPHMAELLFATNPLRLSYSLFADSNPFMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCHHH PVAKAAAEVTAARKPVPPDNPFLAVQKLWSDQISAGLDAFRDLRDRAVEQAFFGIYGSPV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LQGMLGLNLDEKVRELPPTSPQKRAFLTQKMAEFRDRVDEGGFNEALVRSVLFVIAADRQ HHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH LDERCAAALKETCLRLTQLSISDFKSLVRRQFYILLLEGIAAVEAIATLVPDGAARQSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH NDAAAVAGANGTLTIGEQQNIEKLAEVLGVAAPHSPAPVLPADTHRSAPSTLQIAPAGA HHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure AGESATPAPLQPGTWGQPGHQAAPWSGVFAEAWSRAFTGTAPLPPGIGTLPAGPLVDYL CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH VDAAQRSVLFIDLMRRRGNEQQDITSRPMATVLSFDHDVLVSGRALPRPINYFLSRIVPP HHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCC PGAKVDPDKRPVVVVDPRAGQGPGIGGFKTQSEIGEALANGHPVYFIGFSAQPEPGQTFL CCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHH DVVEGQVSFFERIVAMHPDAPRPFAIGNCQAGYQTLMVAMLRPDLFGPCMVAGSPMSYWQ HHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHC GVHGKNPMRYSGGLLGGSWLTALVSDLGRGKFDGTWLILNFDSLNPANWLWGKQYDLYAA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEE VDTEAQRYLGFEKWWGDFITLNGDEIQFLVDELFIGDGLTRNEMRSSDGTVFDLRNIASP ECHHHHHHCCHHHHCCCEEEECCCHHHHHHHHHHHCCCCCHHHHCCCCCCEEEHHHHCCH LIVFTSLGDNISPPPQTLGWILDLYKDVDAIHAEGRTIVYCLNQTVGHLAIFVSAKVGAK HEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHEEEEEEECCCCC EDEEMVRLMDLIDCLPPGLYELVISPASEEEVKAGGHPWHSRFEARSLEDIRAFGRNSVE CHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC DDRAFAAVRRVSEINLSLYRTFLQPAVRALANPHMAELLFATNPLRLSYSLFADSNPFMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCHHH PVAKAAAEVTAARKPVPPDNPFLAVQKLWSDQISAGLDAFRDLRDRAVEQAFFGIYGSPV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LQGMLGLNLDEKVRELPPTSPQKRAFLTQKMAEFRDRVDEGGFNEALVRSVLFVIAADRQ HHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH LDERCAAALKETCLRLTQLSISDFKSLVRRQFYILLLEGIAAVEAIATLVPDGAARQSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH NDAAAVAGANGTLTIGEQQNIEKLAEVLGVAAPHSPAPVLPADTHRSAPSTLQIAPAGA HHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10094701 [H]