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The map label for this gene is nudC [H]

Identifier: 158421764

GI number: 158421764

Start: 169331

End: 170269

Strand: Reverse

Name: nudC [H]

Synonym: AZC_0140

Alternate gene names: 158421764

Gene position: 170269-169331 (Counterclockwise)

Preceding gene: 158421765

Following gene: 158421763

Centisome position: 3.17

GC content: 70.5

Gene sequence:

>939_bases
ATGCTCGCGTCCTCGTCTTCCCCTCTCGGCCCGTGGCCGGCTCTCGGCTATGTGGGCAATCCCCTCGATCGTGCGGCCCA
GCGTCGGGGCGAGGCGGACGCCCTCGCCCGGCGCTCCGATGCCCAGGCCTATCTCCTGGGTGGGGAACTCGTGGCGCTGA
AAGCGGGAAAGGGAGAGGTCCACGGCCCCCTCTTTTCCCTTCCCGAGGCGCAGGACTGGGGCGGCAGCGAGCCGCTCTTC
CTCGGCCTTGAGGACGGCGCCCCCCGCTTCGGCCTCTTCTTCCCTGTCGAGAATCGCGAGCGCATGGAGGCCGCCGGCCT
CATCGTCACCGATCTGCGCAGCATCGCCGTGGGCGGCTTGGTCGAAGCCCGCCATCTCGGCCCCATCGCCTGCGCCAAGG
CGCTGGGCGCCTGGCACCAGCGTCACCGCTTCTGCTCCAATTGCGGCGCCCCCACCCGCGTGGTGGAGGCGGGCTGGCGG
CGCGACTGCCCCTCCTGCGGCGGCCAGCATTTTCCGCGCACGGACCCGGTGGCGATCATGCTCACCTATTCCGGCGACAA
GTGCCTGCTCGGCCGCCAGCCGCGCTTTGCCCCCAACATGTGGTCGTGTCTTGCCGGCTTCGTGGAGCCGGGCGAGACCT
TCGAGGAGGCGGTGCGGCGCGAGACCTTCGAGGAAGCCGGAATCACCACGGGCAAGGTCGCCTATCATTCCGCCCAGCCC
TGGCCCTTCCCCATGTCGCTCATGATCGGCTGTCTCGCAGAGGCGACGTCCACGGACATCGTGATCGATCCGCTGGAACT
GGAGGCCGCCCGCTGGTTCGACCGCGCCGAGGCTGCGGCCATGCTGACGCGCACCCACCCGGACGGCCTGTTCGCCCCGC
CGCCCGTGGCCATCGCCCACCATCTCATCCGCGCCTTCGTGGAAGGCGCCACCGCCTGA

Upstream 100 bases:

>100_bases
CGGCTCAAGGCCAGTCTCCGCCTGCCCTGAGGCGCTTGCCTCCATCGGGCCGGCGTGCCACGGTCCGGCGCAGGCCTCCC
GCCCTCAGTTCTCAGGCTCC

Downstream 100 bases:

>100_bases
TCGGTGCGGATCAGAGCCGGCCAGTGAGGGAGCCTGTCGCATGACGCCTGTTCCGGGCGCCTCGCCAGCCAAGCGACCGC
AGGGGCTCCTCAACCGTCTC

Product: MutT/NUDIX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MLASSSSPLGPWPALGYVGNPLDRAAQRRGEADALARRSDAQAYLLGGELVALKAGKGEVHGPLFSLPEAQDWGGSEPLF
LGLEDGAPRFGLFFPVENRERMEAAGLIVTDLRSIAVGGLVEARHLGPIACAKALGAWHQRHRFCSNCGAPTRVVEAGWR
RDCPSCGGQHFPRTDPVAIMLTYSGDKCLLGRQPRFAPNMWSCLAGFVEPGETFEEAVRRETFEEAGITTGKVAYHSAQP
WPFPMSLMIGCLAEATSTDIVIDPLELEAARWFDRAEAAAMLTRTHPDGLFAPPPVAIAHHLIRAFVEGATA

Sequences:

>Translated_312_residues
MLASSSSPLGPWPALGYVGNPLDRAAQRRGEADALARRSDAQAYLLGGELVALKAGKGEVHGPLFSLPEAQDWGGSEPLF
LGLEDGAPRFGLFFPVENRERMEAAGLIVTDLRSIAVGGLVEARHLGPIACAKALGAWHQRHRFCSNCGAPTRVVEAGWR
RDCPSCGGQHFPRTDPVAIMLTYSGDKCLLGRQPRFAPNMWSCLAGFVEPGETFEEAVRRETFEEAGITTGKVAYHSAQP
WPFPMSLMIGCLAEATSTDIVIDPLELEAARWFDRAEAAAMLTRTHPDGLFAPPPVAIAHHLIRAFVEGATA
>Mature_312_residues
MLASSSSPLGPWPALGYVGNPLDRAAQRRGEADALARRSDAQAYLLGGELVALKAGKGEVHGPLFSLPEAQDWGGSEPLF
LGLEDGAPRFGLFFPVENRERMEAAGLIVTDLRSIAVGGLVEARHLGPIACAKALGAWHQRHRFCSNCGAPTRVVEAGWR
RDCPSCGGQHFPRTDPVAIMLTYSGDKCLLGRQPRFAPNMWSCLAGFVEPGETFEEAVRRETFEEAGITTGKVAYHSAQP
WPFPMSLMIGCLAEATSTDIVIDPLELEAARWFDRAEAAAMLTRTHPDGLFAPPPVAIAHHLIRAFVEGATA

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=197, Percent_Identity=49.746192893401, Blast_Score=204, Evalue=7e-53,
Organism=Homo sapiens, GI50593112, Length=202, Percent_Identity=42.5742574257426, Blast_Score=155, Evalue=4e-38,
Organism=Escherichia coli, GI48994995, Length=173, Percent_Identity=36.9942196531792, Blast_Score=119, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI212645999, Length=239, Percent_Identity=31.3807531380753, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71986510, Length=239, Percent_Identity=31.3807531380753, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6321371, Length=201, Percent_Identity=34.8258706467662, Blast_Score=108, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 33596; Mature: 33596

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASSSSPLGPWPALGYVGNPLDRAAQRRGEADALARRSDAQAYLLGGELVALKAGKGEV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCEEEECCEEEEEECCCCCC
HGPLFSLPEAQDWGGSEPLFLGLEDGAPRFGLFFPVENRERMEAAGLIVTDLRSIAVGGL
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
VEARHLGPIACAKALGAWHQRHRFCSNCGAPTRVVEAGWRRDCPSCGGQHFPRTDPVAIM
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
LTYSGDKCLLGRQPRFAPNMWSCLAGFVEPGETFEEAVRRETFEEAGITTGKVAYHSAQP
EEECCCEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC
WPFPMSLMIGCLAEATSTDIVIDPLELEAARWFDRAEAAAMLTRTHPDGLFAPPPVAIAH
CCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
HLIRAFVEGATA
HHHHHHHHCCCC
>Mature Secondary Structure
MLASSSSPLGPWPALGYVGNPLDRAAQRRGEADALARRSDAQAYLLGGELVALKAGKGEV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCEEEECCEEEEEECCCCCC
HGPLFSLPEAQDWGGSEPLFLGLEDGAPRFGLFFPVENRERMEAAGLIVTDLRSIAVGGL
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
VEARHLGPIACAKALGAWHQRHRFCSNCGAPTRVVEAGWRRDCPSCGGQHFPRTDPVAIM
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
LTYSGDKCLLGRQPRFAPNMWSCLAGFVEPGETFEEAVRRETFEEAGITTGKVAYHSAQP
EEECCCEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC
WPFPMSLMIGCLAEATSTDIVIDPLELEAARWFDRAEAAAMLTRTHPDGLFAPPPVAIAH
CCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
HLIRAFVEGATA
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA