| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is xanP [H]
Identifier: 158421763
GI number: 158421763
Start: 167488
End: 169290
Strand: Reverse
Name: xanP [H]
Synonym: AZC_0139
Alternate gene names: 158421763
Gene position: 169290-167488 (Counterclockwise)
Preceding gene: 158421764
Following gene: 158421760
Centisome position: 3.15
GC content: 69.33
Gene sequence:
>1803_bases ATGACGCCTGTTCCGGGCGCCTCGCCAGCCAAGCGACCGCAGGGGCTCCTCAACCGTCTCCGCCGCCTCGTGATGCTGGA ACACGGCACGCCCCACCGGCCGCGCCGCCGGCCGCCGGCGCTGGTGTTCGGGCTCGAGGACAAGGTTCCCGCCGGGGCGC TTATCGCCCTCTCGGGCCAGCACGCCATGCTGGCGCTCACCTTCCTGATCTATCCGCTGGTGGCGGCCAGCCAGGTCGGG CTATCGCAGCCCGAGACCAATGCAGTGCTCACCGCCTGCACGCTGTGCATCGGCATCGCCACCATGCTCCAGTGCGCGCG CTCCCGGGTCGGCAGCGGCTATCTCATCGTCCATGTGCCCTCGCCCGGCGCCTTGCCGCTGGCCATCCAGGCGCTGACCC TGGGCGGCGTCGGGCTCATGGCGGCCATGACGCTGCTGGTGGGCGTGTCGCAACTGTTCATCGCCCGCATCGTTCGCCCG CTTCGGGTGCTGCTGCCGCCGGAGGTCTGCGGCGTCGCGGTGACCACGCTCGGCATCTCGCTGGCGGAACCGGCGCTCCG GCGCGCGCTCGGGCTCGACCGGGGCAGCAGCGTGGTGGACGACAATGCGCTGATCGTCAGCCTCGTGACCGTGGCGCTCA TCGTCGGCATCGCCATTTTCACGCCCCGGCGCATCAAGATCTTCGCCGTCCTGATAGGGGCCTCCTCGGGCTGGGCGCTC GCCGCCTGGCTCGGCATCGAGCAGCCGGGCGGCGCGGCGCTGCTCGCCTCGGCGCCGCTCGTGGCACTGCCTTCGCTGCA TCTGCCCGCCTTCGAGATCGCCCCTTCCCTGCTGCCGCTGGCGGCACTGAGCGTGATGCTGAACATCGTGGACGTGCTCA GCATCACCGTCTCGCTGGAAAAGATGAACGATGCGGAATGGCGGCGGGCGGACATGCGGGCGGCGAGCCGCGCCGTCACC ACATCCGGCATCGGCAACGTGCTGAACGGCCTCGTCTCCGGCTTCCAGTCGGGCCTGTCATCCTCGGCAGTGGGCCTTGC CTTCGCCACGGGGGCCACCGCGCGCATCATCGGCTTCGTCGCCGGCGCGCTCATCTTCGCCACCGCCTTCTTCCCGAAGG CCATCGTGGCGCTCACCCTCATTCCCGCGCCCGTGGTGGGTGGCATCCTCATCTACACCACCGCTTACCTGCTGGTGGCG GGCATGGAGCTGATCCTTTCCCGCCGTCTCAGCGAGCGGCGGGTGTTTCTCGTCGGCTTGTCGATCCTCGCGGCTCTGTC CGTCGCGCTGCTGCCCATCAAGGGGCAGTTTCCGGGCTGGATCCAGCCTCTGGTCTCCACCCCCATGAGCGTCGGCGCCT TCTGCGCCATCGTGCTCAACCTCATCTTCCGGATCGGCATCTCGCAGGAGTCCGGCTTTACCGCCGGTCTCGGCACCGAT CCCTACCCGACCATGCGCGACTTCCTCGAGCGCCAAGGGGATCTCTGGGGTGCGCGGCGCGACGTGATCGCCGCCGCCAT TCCGGTGGGCGCCCAGGCGCTGGAGCTGCTTCTGGAGAACAGCATCGCCACCGGCGAGGTGGAGGTGCGCGCCCGCTTCG ACGAGACGCACCTCGACGTTTTCCTGCTTTATGACGGCGCGGTGCTGGAGCCGCCAAAGGCGCGCCCCTCGCCCGAGGCC CTTCTGGGTGATGACGCGGAGGTGGCGGCCTTCTGCGCCTATATGATCCAGAAGCTCTCCGACCACGTCACTTTCGGCCA GAGCAGCGGGCGGGCCCGCATTGCGCTCCGCTTTGACCACTGA
Upstream 100 bases:
>100_bases CCGCCCGTGGCCATCGCCCACCATCTCATCCGCGCCTTCGTGGAAGGCGCCACCGCCTGATCGGTGCGGATCAGAGCCGG CCAGTGAGGGAGCCTGTCGC
Downstream 100 bases:
>100_bases GGGCCGCAGCGCGCCTCACGCCTCCGGCTTGGGCGAGCGGGTGGTGCGGAAGGGGTGGGCGGGATAGACGCCCAGAATGC GCATCTCGCGGGAGAAGAAG
Product: xanthine/uracil permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MTPVPGASPAKRPQGLLNRLRRLVMLEHGTPHRPRRRPPALVFGLEDKVPAGALIALSGQHAMLALTFLIYPLVAASQVG LSQPETNAVLTACTLCIGIATMLQCARSRVGSGYLIVHVPSPGALPLAIQALTLGGVGLMAAMTLLVGVSQLFIARIVRP LRVLLPPEVCGVAVTTLGISLAEPALRRALGLDRGSSVVDDNALIVSLVTVALIVGIAIFTPRRIKIFAVLIGASSGWAL AAWLGIEQPGGAALLASAPLVALPSLHLPAFEIAPSLLPLAALSVMLNIVDVLSITVSLEKMNDAEWRRADMRAASRAVT TSGIGNVLNGLVSGFQSGLSSSAVGLAFATGATARIIGFVAGALIFATAFFPKAIVALTLIPAPVVGGILIYTTAYLLVA GMELILSRRLSERRVFLVGLSILAALSVALLPIKGQFPGWIQPLVSTPMSVGAFCAIVLNLIFRIGISQESGFTAGLGTD PYPTMRDFLERQGDLWGARRDVIAAAIPVGAQALELLLENSIATGEVEVRARFDETHLDVFLLYDGAVLEPPKARPSPEA LLGDDAEVAAFCAYMIQKLSDHVTFGQSSGRARIALRFDH
Sequences:
>Translated_600_residues MTPVPGASPAKRPQGLLNRLRRLVMLEHGTPHRPRRRPPALVFGLEDKVPAGALIALSGQHAMLALTFLIYPLVAASQVG LSQPETNAVLTACTLCIGIATMLQCARSRVGSGYLIVHVPSPGALPLAIQALTLGGVGLMAAMTLLVGVSQLFIARIVRP LRVLLPPEVCGVAVTTLGISLAEPALRRALGLDRGSSVVDDNALIVSLVTVALIVGIAIFTPRRIKIFAVLIGASSGWAL AAWLGIEQPGGAALLASAPLVALPSLHLPAFEIAPSLLPLAALSVMLNIVDVLSITVSLEKMNDAEWRRADMRAASRAVT TSGIGNVLNGLVSGFQSGLSSSAVGLAFATGATARIIGFVAGALIFATAFFPKAIVALTLIPAPVVGGILIYTTAYLLVA GMELILSRRLSERRVFLVGLSILAALSVALLPIKGQFPGWIQPLVSTPMSVGAFCAIVLNLIFRIGISQESGFTAGLGTD PYPTMRDFLERQGDLWGARRDVIAAAIPVGAQALELLLENSIATGEVEVRARFDETHLDVFLLYDGAVLEPPKARPSPEA LLGDDAEVAAFCAYMIQKLSDHVTFGQSSGRARIALRFDH >Mature_599_residues TPVPGASPAKRPQGLLNRLRRLVMLEHGTPHRPRRRPPALVFGLEDKVPAGALIALSGQHAMLALTFLIYPLVAASQVGL SQPETNAVLTACTLCIGIATMLQCARSRVGSGYLIVHVPSPGALPLAIQALTLGGVGLMAAMTLLVGVSQLFIARIVRPL RVLLPPEVCGVAVTTLGISLAEPALRRALGLDRGSSVVDDNALIVSLVTVALIVGIAIFTPRRIKIFAVLIGASSGWALA AWLGIEQPGGAALLASAPLVALPSLHLPAFEIAPSLLPLAALSVMLNIVDVLSITVSLEKMNDAEWRRADMRAASRAVTT SGIGNVLNGLVSGFQSGLSSSAVGLAFATGATARIIGFVAGALIFATAFFPKAIVALTLIPAPVVGGILIYTTAYLLVAG MELILSRRLSERRVFLVGLSILAALSVALLPIKGQFPGWIQPLVSTPMSVGAFCAIVLNLIFRIGISQESGFTAGLGTDP YPTMRDFLERQGDLWGARRDVIAAAIPVGAQALELLLENSIATGEVEVRARFDETHLDVFLLYDGAVLEPPKARPSPEAL LGDDAEVAAFCAYMIQKLSDHVTFGQSSGRARIALRFDH
Specific function: Specific, proton motive force-dependent high-affinity transporter for xanthine [H]
COG id: COG2233
COG function: function code F; Xanthine/uracil permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790087, Length=441, Percent_Identity=24.7165532879819, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87082181, Length=430, Percent_Identity=24.4186046511628, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006042 - InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 62923; Mature: 62792
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVPGASPAKRPQGLLNRLRRLVMLEHGTPHRPRRRPPALVFGLEDKVPAGALIALSGQ CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCC HAMLALTFLIYPLVAASQVGLSQPETNAVLTACTLCIGIATMLQCARSRVGSGYLIVHVP HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC SPGALPLAIQALTLGGVGLMAAMTLLVGVSQLFIARIVRPLRVLLPPEVCGVAVTTLGIS CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LAEPALRRALGLDRGSSVVDDNALIVSLVTVALIVGIAIFTPRRIKIFAVLIGASSGWAL HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEE AAWLGIEQPGGAALLASAPLVALPSLHLPAFEIAPSLLPLAALSVMLNIVDVLSITVSLE EEEECCCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMNDAEWRRADMRAASRAVTTSGIGNVLNGLVSGFQSGLSSSAVGLAFATGATARIIGFV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHH AGALIFATAFFPKAIVALTLIPAPVVGGILIYTTAYLLVAGMELILSRRLSERRVFLVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHH SILAALSVALLPIKGQFPGWIQPLVSTPMSVGAFCAIVLNLIFRIGISQESGFTAGLGTD HHHHHHHHHHEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PYPTMRDFLERQGDLWGARRDVIAAAIPVGAQALELLLENSIATGEVEVRARFDETHLDV CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEE FLLYDGAVLEPPKARPSPEALLGDDAEVAAFCAYMIQKLSDHVTFGQSSGRARIALRFDH EEEECCCEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure TPVPGASPAKRPQGLLNRLRRLVMLEHGTPHRPRRRPPALVFGLEDKVPAGALIALSGQ CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCC HAMLALTFLIYPLVAASQVGLSQPETNAVLTACTLCIGIATMLQCARSRVGSGYLIVHVP HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC SPGALPLAIQALTLGGVGLMAAMTLLVGVSQLFIARIVRPLRVLLPPEVCGVAVTTLGIS CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LAEPALRRALGLDRGSSVVDDNALIVSLVTVALIVGIAIFTPRRIKIFAVLIGASSGWAL HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEE AAWLGIEQPGGAALLASAPLVALPSLHLPAFEIAPSLLPLAALSVMLNIVDVLSITVSLE EEEECCCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMNDAEWRRADMRAASRAVTTSGIGNVLNGLVSGFQSGLSSSAVGLAFATGATARIIGFV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHH AGALIFATAFFPKAIVALTLIPAPVVGGILIYTTAYLLVAGMELILSRRLSERRVFLVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHH SILAALSVALLPIKGQFPGWIQPLVSTPMSVGAFCAIVLNLIFRIGISQESGFTAGLGTD HHHHHHHHHHEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PYPTMRDFLERQGDLWGARRDVIAAAIPVGAQALELLLENSIATGEVEVRARFDETHLDV CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEE FLLYDGAVLEPPKARPSPEALLGDDAEVAAFCAYMIQKLSDHVTFGQSSGRARIALRFDH EEEECCCEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]