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The map label for this gene is rfbU [H]

Identifier: 158421670

GI number: 158421670

Start: 55673

End: 57070

Strand: Reverse

Name: rfbU [H]

Synonym: AZC_0046

Alternate gene names: 158421670

Gene position: 57070-55673 (Counterclockwise)

Preceding gene: 158421674

Following gene: 158421669

Centisome position: 1.06

GC content: 66.02

Gene sequence:

>1398_bases
ATGCGTGGTTGCCATGCAGCGCAAATCGTGGCGTGCTCCCGGCCGCTTCATCTTGCCAGAGGGTCCCGCATGTCACGTCC
CGCCCAGTCGCCCACCGTCATGATCGACGGCTACAATCTGGGGCTGGAGAAAGGGACCGGCGTTGCCACGTATGCGCGCA
ACCTGAGCTATGCCTGCCGGGACCTCGGCCTTCGGACGGAAATCCTCTATGGCGCGCCCTTCGGGCCGGGCCGCTCGGAG
CTGCTGCGCGAGATCTCATTCTTCGATCCCTTCAAGCCCAAGAGCGCGCTGGAATCCGCGCTGCGCACGGCGGGTCGGCT
GGTGCCGCGGCCCGGCGGCCCGAAGGCGTTCGAAGTGCCGGTTACCGGCGCCGTCATCCTCGGCTCGCAGCGCTCGCGCC
TGCCGCATTTCGATCGCATCTGGAATGCGCCGGACGTGTTCGAGACGGCCACGACCCAGTTCGCCGTCACCAACGGCTTC
ATGAACGTCCGGGGCCTGCCCCGCACCGACATCATGCACTGGACGTACCCGCTGCCACTGACGCTGCCGGGGGCCCGGAA
CATCTACACGCTGCATGACCTCGTGCCGCTGCGCCTGCCCTACACCACACTGGACCACAAGGGGCGCTACTTGCGCCTCA
CCCAGAAGCTGGTTCAGACGGCGGACCATATCGTCACCGTGTCGGAGACCTCGAAGCGCGACATCATCGAGCTGCTGGGC
TGCCCGCCGGAGAAGATCACCAACACCTACCAGTCCGCCGAAATCCCGCAGAAATATCTCGACCGGTCCGAGGAAGAGGT
GCGGGCGGACATCGAGGGTGCCTTCGGCCTGCCCTACAAGGGCTATTTCCTCTTCTTCGGCGCCATCGAGCCCAAAAAGA
ACGTCGGCCGCCTGATCGAAGCCTATCTCGGCACGCAGATGGACGCGCCGCTCGTCCTTCTGGGCAATGCGGCCTGGAAG
TCCCACGAGGAGCTGCGCCTGCTGAATGACAGCAGCCAGAAATATATCGAGCAGGTGGGTACGCGCACCTTCACGCGCGA
GCGGGTGCGGCGACTCGAGTATGCGCCCTTCTCCCTGCTGGTGAGCGTCATCCGCGGCGCTAAGGCGACCGTCTTCCCCT
CGCTCTATGAGGGCTTCGGCCTGCCCATCCTCGAGAGCATGCTGCTGGGCACGCCGGTCATCACCTCCGACATCGGGGCG
ACGGCCGAGATCGCCGGCGATGCCGCGTTGCTTGTGGACCCCTATGATACCGGCAGCATTGCGCGCGCGCTCCGGGCGGT
GCATGACGATGCCGATCTGCGCGCCGACCTCGCTGCCCGGGGCCGGGCGCGGGCGGAATTCTTCTCGCTCGCCCGCTATG
CGGAGCGGGTACAGGCCATGTACGAACGTCTGGTGTGA

Upstream 100 bases:

>100_bases
TAGCCTCGCGATCGGTGTGTTCATCAGGCAAGCTAAACATTAAGAAAAGCATCCACTCCGGCGGAAATCTGAAAAACGGG
GAGGATGGCGGCACCTGCGG

Downstream 100 bases:

>100_bases
TGCCGCAACGGAACAAGGGGTTTCTTGCCGTCCTGCTGTCGGACGGTGCGACAGAGCGGGCTCTGGAACGTGCCCCGCTG
GACGCCGCCCGTCGCCGGGG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MRGCHAAQIVACSRPLHLARGSRMSRPAQSPTVMIDGYNLGLEKGTGVATYARNLSYACRDLGLRTEILYGAPFGPGRSE
LLREISFFDPFKPKSALESALRTAGRLVPRPGGPKAFEVPVTGAVILGSQRSRLPHFDRIWNAPDVFETATTQFAVTNGF
MNVRGLPRTDIMHWTYPLPLTLPGARNIYTLHDLVPLRLPYTTLDHKGRYLRLTQKLVQTADHIVTVSETSKRDIIELLG
CPPEKITNTYQSAEIPQKYLDRSEEEVRADIEGAFGLPYKGYFLFFGAIEPKKNVGRLIEAYLGTQMDAPLVLLGNAAWK
SHEELRLLNDSSQKYIEQVGTRTFTRERVRRLEYAPFSLLVSVIRGAKATVFPSLYEGFGLPILESMLLGTPVITSDIGA
TAEIAGDAALLVDPYDTGSIARALRAVHDDADLRADLAARGRARAEFFSLARYAERVQAMYERLV

Sequences:

>Translated_465_residues
MRGCHAAQIVACSRPLHLARGSRMSRPAQSPTVMIDGYNLGLEKGTGVATYARNLSYACRDLGLRTEILYGAPFGPGRSE
LLREISFFDPFKPKSALESALRTAGRLVPRPGGPKAFEVPVTGAVILGSQRSRLPHFDRIWNAPDVFETATTQFAVTNGF
MNVRGLPRTDIMHWTYPLPLTLPGARNIYTLHDLVPLRLPYTTLDHKGRYLRLTQKLVQTADHIVTVSETSKRDIIELLG
CPPEKITNTYQSAEIPQKYLDRSEEEVRADIEGAFGLPYKGYFLFFGAIEPKKNVGRLIEAYLGTQMDAPLVLLGNAAWK
SHEELRLLNDSSQKYIEQVGTRTFTRERVRRLEYAPFSLLVSVIRGAKATVFPSLYEGFGLPILESMLLGTPVITSDIGA
TAEIAGDAALLVDPYDTGSIARALRAVHDDADLRADLAARGRARAEFFSLARYAERVQAMYERLV
>Mature_465_residues
MRGCHAAQIVACSRPLHLARGSRMSRPAQSPTVMIDGYNLGLEKGTGVATYARNLSYACRDLGLRTEILYGAPFGPGRSE
LLREISFFDPFKPKSALESALRTAGRLVPRPGGPKAFEVPVTGAVILGSQRSRLPHFDRIWNAPDVFETATTQFAVTNGF
MNVRGLPRTDIMHWTYPLPLTLPGARNIYTLHDLVPLRLPYTTLDHKGRYLRLTQKLVQTADHIVTVSETSKRDIIELLG
CPPEKITNTYQSAEIPQKYLDRSEEEVRADIEGAFGLPYKGYFLFFGAIEPKKNVGRLIEAYLGTQMDAPLVLLGNAAWK
SHEELRLLNDSSQKYIEQVGTRTFTRERVRRLEYAPFSLLVSVIRGAKATVFPSLYEGFGLPILESMLLGTPVITSDIGA
TAEIAGDAALLVDPYDTGSIARALRAVHDDADLRADLAARGRARAEFFSLARYAERVQAMYERLV

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 51601; Mature: 51601

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGCHAAQIVACSRPLHLARGSRMSRPAQSPTVMIDGYNLGLEKGTGVATYARNLSYACR
CCCCCHHHHEECCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
DLGLRTEILYGAPFGPGRSELLREISFFDPFKPKSALESALRTAGRLVPRPGGPKAFEVP
HCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEC
VTGAVILGSQRSRLPHFDRIWNAPDVFETATTQFAVTNGFMNVRGLPRTDIMHWTYPLPL
CCCEEEECCCCCCCCCHHHHCCCCCHHHHHCCEEEEECCCEECCCCCCCCCEEEECCCCE
TLPGARNIYTLHDLVPLRLPYTTLDHKGRYLRLTQKLVQTADHIVTVSETSKRDIIELLG
ECCCCCCEEEHHHCEECCCCCEECCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHC
CPPEKITNTYQSAEIPQKYLDRSEEEVRADIEGAFGLPYKGYFLFFGAIEPKKNVGRLIE
CCHHHHHCCHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHH
AYLGTQMDAPLVLLGNAAWKSHEELRLLNDSSQKYIEQVGTRTFTRERVRRLEYAPFSLL
HHHCCCCCCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHH
VSVIRGAKATVFPSLYEGFGLPILESMLLGTPVITSDIGATAEIAGDAALLVDPYDTGSI
HHHHCCCCHHCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEECCCCCHHH
ARALRAVHDDADLRADLAARGRARAEFFSLARYAERVQAMYERLV
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGCHAAQIVACSRPLHLARGSRMSRPAQSPTVMIDGYNLGLEKGTGVATYARNLSYACR
CCCCCHHHHEECCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
DLGLRTEILYGAPFGPGRSELLREISFFDPFKPKSALESALRTAGRLVPRPGGPKAFEVP
HCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEC
VTGAVILGSQRSRLPHFDRIWNAPDVFETATTQFAVTNGFMNVRGLPRTDIMHWTYPLPL
CCCEEEECCCCCCCCCHHHHCCCCCHHHHHCCEEEEECCCEECCCCCCCCCEEEECCCCE
TLPGARNIYTLHDLVPLRLPYTTLDHKGRYLRLTQKLVQTADHIVTVSETSKRDIIELLG
ECCCCCCEEEHHHCEECCCCCEECCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHC
CPPEKITNTYQSAEIPQKYLDRSEEEVRADIEGAFGLPYKGYFLFFGAIEPKKNVGRLIE
CCHHHHHCCHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHH
AYLGTQMDAPLVLLGNAAWKSHEELRLLNDSSQKYIEQVGTRTFTRERVRRLEYAPFSLL
HHHCCCCCCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHH
VSVIRGAKATVFPSLYEGFGLPILESMLLGTPVITSDIGATAEIAGDAALLVDPYDTGSI
HHHHCCCCHHCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEECCCCCHHH
ARALRAVHDDADLRADLAARGRARAEFFSLARYAERVQAMYERLV
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]