| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is wbpY
Identifier: 158421674
GI number: 158421674
Start: 60784
End: 61911
Strand: Reverse
Name: wbpY
Synonym: AZC_0050
Alternate gene names: NA
Gene position: 61911-60784 (Counterclockwise)
Preceding gene: 158421675
Following gene: 158421670
Centisome position: 1.15
GC content: 57.27
Gene sequence:
>1128_bases ATGAAGACCGTCTTTCTCGATATCACCGAACTCCGCGGCAATCCCGTCCGAACCGGTATACAGCGGATGGTGCGGCAACT TCTGAAGGCGTGGCCCACCGATGTTGAGGCTGTGCCCGTGGTCTATGACAGCGTACGGGAGGCTCTGCGTATTATATCGC AGGAGACCGTTGAATTTCTCATCGAGTCCGGCGACACGCCGAGTATGCCGCTTCGCGACGCCGTGGATCAGGTCAATTTT CTTGATGACCCGGCACGGTCTCCGACCGTTACCCTTAGAGAGGGCGACAAGGTTCATATTCCTGAACTGTTTTTCGATGA GAAGCGGACGGTTTTTCATCGAAAGGCGATCGCATCTGGCGTCGACCTGTCCGTATGGATTCCGGATTTTATACCTTGGC TTCGCCCCGAATGCTTCCCGCGCATTCCCTCGTTTCATCCCTATATGCACTACCTTTGGCTGGTCTTCGAAGCGCGGAAG AGAGCTTTCATAAGCGCTGCCGTGCGTGATGACTTCGAGTGCCGTATTTATCGGCGGCCCTCTCAGGGCACCATCGTCAC AGACCTTGGGGCGGATGCGATCAATATCGGTCAGCAGACCTTCAATGCCGACCGGAAAGATCTGATCTTTCTGGGCACAC TGGAGCCCCGTAAGGCCCAGCACGTCGTGTATAACGCTTTCATCGGACGTACCCGCCATCCTGACCTTAGGCTCACCTTC ATCGGCGCTATTCCCGAGCATGGGATTCCCGCAGACTTCATGCCGTTGGTGAAGTCAAAAAGGCCCGACGTCCGTTTATT GACGGAAGCCAATGACAGTGATGTAGCTGAAATATTCAAGGGCGCCCGTGCGACCGTTTATACCAGCCAAGTGGAGGGTT ATGGCCTCCCGCCGATGGAGAGTCTCTACGCGGGCGTGCCGGTCATTGTACGCGACAACCTACCGGCCTTGGTTGGGAAA CCGGATTTCGGTCAGCTCCGATTGGGGCGAGGGGACGAGGAAGACATTCGCTCCGCGATCGACATCATCGGCGATGACCA GCGGTGCGCAGCCCTGTGGGAAGACGCAAGGCGCTTCCCCAGCAGGACCTGGCAAGCCGTCGCCCGTCAGATTGCCGACT GGGCCTGA
Upstream 100 bases:
>100_bases AACAGGCTCGTGCCGCCCATGCAGAACGGCAGCCGAAGGAATATTGCAGGCAGTTGTTGGCAGCGCTCGGCATAGATGCC GGCGCGCTGAGTGCTAATCG
Downstream 100 bases:
>100_bases ACGACGCGCCCCCGGAAGACCAGCCTGCGTTCTGAAGCGAAAGCGGCTGATCTTCGCGTCTCTTCAATACAAGAGTGCGC CCGGTGACGCTTTAATGCAC
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKTVFLDITELRGNPVRTGIQRMVRQLLKAWPTDVEAVPVVYDSVREALRIISQETVEFLIESGDTPSMPLRDAVDQVNF LDDPARSPTVTLREGDKVHIPELFFDEKRTVFHRKAIASGVDLSVWIPDFIPWLRPECFPRIPSFHPYMHYLWLVFEARK RAFISAAVRDDFECRIYRRPSQGTIVTDLGADAINIGQQTFNADRKDLIFLGTLEPRKAQHVVYNAFIGRTRHPDLRLTF IGAIPEHGIPADFMPLVKSKRPDVRLLTEANDSDVAEIFKGARATVYTSQVEGYGLPPMESLYAGVPVIVRDNLPALVGK PDFGQLRLGRGDEEDIRSAIDIIGDDQRCAALWEDARRFPSRTWQAVARQIADWA
Sequences:
>Translated_375_residues MKTVFLDITELRGNPVRTGIQRMVRQLLKAWPTDVEAVPVVYDSVREALRIISQETVEFLIESGDTPSMPLRDAVDQVNF LDDPARSPTVTLREGDKVHIPELFFDEKRTVFHRKAIASGVDLSVWIPDFIPWLRPECFPRIPSFHPYMHYLWLVFEARK RAFISAAVRDDFECRIYRRPSQGTIVTDLGADAINIGQQTFNADRKDLIFLGTLEPRKAQHVVYNAFIGRTRHPDLRLTF IGAIPEHGIPADFMPLVKSKRPDVRLLTEANDSDVAEIFKGARATVYTSQVEGYGLPPMESLYAGVPVIVRDNLPALVGK PDFGQLRLGRGDEEDIRSAIDIIGDDQRCAALWEDARRFPSRTWQAVARQIADWA >Mature_375_residues MKTVFLDITELRGNPVRTGIQRMVRQLLKAWPTDVEAVPVVYDSVREALRIISQETVEFLIESGDTPSMPLRDAVDQVNF LDDPARSPTVTLREGDKVHIPELFFDEKRTVFHRKAIASGVDLSVWIPDFIPWLRPECFPRIPSFHPYMHYLWLVFEARK RAFISAAVRDDFECRIYRRPSQGTIVTDLGADAINIGQQTFNADRKDLIFLGTLEPRKAQHVVYNAFIGRTRHPDLRLTF IGAIPEHGIPADFMPLVKSKRPDVRLLTEANDSDVAEIFKGARATVYTSQVEGYGLPPMESLYAGVPVIVRDNLPALVGK PDFGQLRLGRGDEEDIRSAIDIIGDDQRCAALWEDARRFPSRTWQAVARQIADWA
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42579; Mature: 42579
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVFLDITELRGNPVRTGIQRMVRQLLKAWPTDVEAVPVVYDSVREALRIISQETVEFL CCEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IESGDTPSMPLRDAVDQVNFLDDPARSPTVTLREGDKVHIPELFFDEKRTVFHRKAIASG HHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCEEECCHHHHCCHHHHHHHHHHHCC VDLSVWIPDFIPWLRPECFPRIPSFHPYMHYLWLVFEARKRAFISAAVRDDFECRIYRRP CCEEEECHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC SQGTIVTDLGADAINIGQQTFNADRKDLIFLGTLEPRKAQHVVYNAFIGRTRHPDLRLTF CCCCEEEECCCCHHHHCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEE IGAIPEHGIPADFMPLVKSKRPDVRLLTEANDSDVAEIFKGARATVYTSQVEGYGLPPME EECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCHH SLYAGVPVIVRDNLPALVGKPDFGQLRLGRGDEEDIRSAIDIIGDDQRCAALWEDARRFP HHHCCCCEEEECCCCCEECCCCCCCEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC SRTWQAVARQIADWA CHHHHHHHHHHHCCC >Mature Secondary Structure MKTVFLDITELRGNPVRTGIQRMVRQLLKAWPTDVEAVPVVYDSVREALRIISQETVEFL CCEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IESGDTPSMPLRDAVDQVNFLDDPARSPTVTLREGDKVHIPELFFDEKRTVFHRKAIASG HHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCEEECCHHHHCCHHHHHHHHHHHCC VDLSVWIPDFIPWLRPECFPRIPSFHPYMHYLWLVFEARKRAFISAAVRDDFECRIYRRP CCEEEECHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC SQGTIVTDLGADAINIGQQTFNADRKDLIFLGTLEPRKAQHVVYNAFIGRTRHPDLRLTF CCCCEEEECCCCHHHHCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEE IGAIPEHGIPADFMPLVKSKRPDVRLLTEANDSDVAEIFKGARATVYTSQVEGYGLPPME EECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCHH SLYAGVPVIVRDNLPALVGKPDFGQLRLGRGDEEDIRSAIDIIGDDQRCAALWEDARRFP HHHCCCCEEEECCCCCEECCCCCCCEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC SRTWQAVARQIADWA CHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA