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The map label for this gene is ctrA [H]

Identifier: 158421659

GI number: 158421659

Start: 37661

End: 38899

Strand: Reverse

Name: ctrA [H]

Synonym: AZC_0035

Alternate gene names: 158421659

Gene position: 38899-37661 (Counterclockwise)

Preceding gene: 158421667

Following gene: 158421655

Centisome position: 0.72

GC content: 66.42

Gene sequence:

>1239_bases
GTGACCGGTCGGGGTTGGTCGCCACAGTGCGCCATGGTATCTGGCGTCGGGATTGGAGACGGAACGTTTATGCGGAAAGT
ATCTGGTTGGCCGCTTCTGCTTCCCGCCGTGGCCCTGTCCCTTTCCGGCTGCGAATCCCTGCCACAGGTGGGTCCGAACG
CGCAGGAAGTCGTCTCCCAGTCCGTCGAACAGAACACGCAGCGCTATGAAGTTGTCGACATCGACAATGCGGTGCTCGAC
GTGGTGCGCCTGCGCGCGCAGGACACGCTCTATACCAGCTTCGGTCATTCCGGCCCGGCGCGTTCGCCTCTCGTGGGTGT
CGGCGACTTTGTGGCCGTGAACATCTGGGAAGCCGGCGCTGGTGGCCTGTTCTCCGCGCCCGTCGTGGCCGGCAGCTTCA
CCACCGGCTCCAAGACCGCCACCATTCCCGATCAGGTCGTGAAGCCCTCCGGCACCATTTCCATTCCCTATGCGGGCGAA
GTGCAGGCCGCGGGCCGCACCACCGAGGCGATCCAGGACGAGATCGTCAAGGCGCTGACCGGCAAGGCGATCCAGCCGCA
GGTGCTGGTCACCGTGACCAAGCCCGTGAGCAGCACCGTCACCGTGACCGGCGAAGTGGTGCAGGGCGCCCGCGTCCCGC
TCACCGCCAAGGGCGACCGCCTGCTCGACGTGATCGCCACCGCAGGCGGCGTGCGCGCGCCGGTGAACGAGACCTTCATC
CAGCTCTCGCGCGGCAACCGCACGGTGCGCGTGTCGATGGAGCGTGTGGTCAGCGATCCGCGCGAGAACGTCTTTATGCA
GCCCGGCGACGTGCTCACCGTGGTGCGCGATCCGCAGGTGTTCCTCGCCTATGGCGCGACGGGCGCGAATGCGGAAGTGC
CGTTCAACTCCTCGGGCATCACGCTGGCCACCGCCCTCGTCAAGGCCGGCGGCCTGCAGGACAACCGCTCCGATCCGTCG
GGCGTGTTCGTGATTCGCTACGAGCCCGAGTTCATCGCCCGCAAGCTGCGTCCCGGCAGCCCGCTGGTGGTGCCTGGCGG
CCTGACCCCCGTGGTGTATCGCCTGAACCTGCGTGACACGAACAGCCTGTTCGTGGCCCAGCACTTCCCGATCTTCAATC
GCGACGTGATCTACGTGACCAACGCGCCGATCACCGACGTGCAGAAGGCGATGCAGATCTTCGTCCTGGTGTCCTCGCCG
GCCACCACGGGCGCCTCGCTCTACACCTCGATGAAGTGA

Upstream 100 bases:

>100_bases
AGCAGCGGGAGGGCACGACCTTCCGTTAACGATGCGCACCTTTTGCCATTGCCCAAAGGTGTGGCAATAGGGAAACAGCG
TAGACTGTATCGGCTGGGCG

Downstream 100 bases:

>100_bases
GCCCTGACGGGGCCAGACGCCGGGCAACCGGCCTCTGGCCCGCTCGGCTCAGGTCAGCGGCGTCATGACGGCCGACTGGA
ACGCCGGCCGCTCGGTGAGG

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTGRGWSPQCAMVSGVGIGDGTFMRKVSGWPLLLPAVALSLSGCESLPQVGPNAQEVVSQSVEQNTQRYEVVDIDNAVLD
VVRLRAQDTLYTSFGHSGPARSPLVGVGDFVAVNIWEAGAGGLFSAPVVAGSFTTGSKTATIPDQVVKPSGTISIPYAGE
VQAAGRTTEAIQDEIVKALTGKAIQPQVLVTVTKPVSSTVTVTGEVVQGARVPLTAKGDRLLDVIATAGGVRAPVNETFI
QLSRGNRTVRVSMERVVSDPRENVFMQPGDVLTVVRDPQVFLAYGATGANAEVPFNSSGITLATALVKAGGLQDNRSDPS
GVFVIRYEPEFIARKLRPGSPLVVPGGLTPVVYRLNLRDTNSLFVAQHFPIFNRDVIYVTNAPITDVQKAMQIFVLVSSP
ATTGASLYTSMK

Sequences:

>Translated_412_residues
MTGRGWSPQCAMVSGVGIGDGTFMRKVSGWPLLLPAVALSLSGCESLPQVGPNAQEVVSQSVEQNTQRYEVVDIDNAVLD
VVRLRAQDTLYTSFGHSGPARSPLVGVGDFVAVNIWEAGAGGLFSAPVVAGSFTTGSKTATIPDQVVKPSGTISIPYAGE
VQAAGRTTEAIQDEIVKALTGKAIQPQVLVTVTKPVSSTVTVTGEVVQGARVPLTAKGDRLLDVIATAGGVRAPVNETFI
QLSRGNRTVRVSMERVVSDPRENVFMQPGDVLTVVRDPQVFLAYGATGANAEVPFNSSGITLATALVKAGGLQDNRSDPS
GVFVIRYEPEFIARKLRPGSPLVVPGGLTPVVYRLNLRDTNSLFVAQHFPIFNRDVIYVTNAPITDVQKAMQIFVLVSSP
ATTGASLYTSMK
>Mature_411_residues
TGRGWSPQCAMVSGVGIGDGTFMRKVSGWPLLLPAVALSLSGCESLPQVGPNAQEVVSQSVEQNTQRYEVVDIDNAVLDV
VRLRAQDTLYTSFGHSGPARSPLVGVGDFVAVNIWEAGAGGLFSAPVVAGSFTTGSKTATIPDQVVKPSGTISIPYAGEV
QAAGRTTEAIQDEIVKALTGKAIQPQVLVTVTKPVSSTVTVTGEVVQGARVPLTAKGDRLLDVIATAGGVRAPVNETFIQ
LSRGNRTVRVSMERVVSDPRENVFMQPGDVLTVVRDPQVFLAYGATGANAEVPFNSSGITLATALVKAGGLQDNRSDPSG
VFVIRYEPEFIARKLRPGSPLVVPGGLTPVVYRLNLRDTNSLFVAQHFPIFNRDVIYVTNAPITDVQKAMQIFVLVSSPA
TTGASLYTSMK

Specific function: Involved in transport of capsular polysaccharides to the cell surface. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=295, Percent_Identity=28.4745762711864, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1788376, Length=371, Percent_Identity=28.3018867924528, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 43451; Mature: 43320

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRGWSPQCAMVSGVGIGDGTFMRKVSGWPLLLPAVALSLSGCESLPQVGPNAQEVVSQ
CCCCCCCCCEEEEEECCCCCCHHHHHCCCCCEEHHHHHHHHHCHHHHHCCCCCHHHHHHH
SVEQNTQRYEVVDIDNAVLDVVRLRAQDTLYTSFGHSGPARSPLVGVGDFVAVNIWEAGA
HHHCCCCEEEEEECCHHHHHHHHHHHHHHEEECCCCCCCCCCCCEECCCEEEEEEEECCC
GGLFSAPVVAGSFTTGSKTATIPDQVVKPSGTISIPYAGEVQAAGRTTEAIQDEIVKALT
CCCEECCEEEECCCCCCCCCCCCHHHCCCCCCEECCCCCCEECCCCHHHHHHHHHHHHHC
GKAIQPQVLVTVTKPVSSTVTVTGEVVQGARVPLTAKGDRLLDVIATAGGVRAPVNETFI
CCCCCCEEEEEEECCCCCEEEEEHHHHCCCCCEEEECCCHHHHHHHCCCCCCCCCCCEEE
QLSRGNRTVRVSMERVVSDPRENVFMQPGDVLTVVRDPQVFLAYGATGANAEVPFNSSGI
EEECCCEEEEEEHHHHHCCCCCCEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCC
TLATALVKAGGLQDNRSDPSGVFVIRYEPEFIARKLRPGSPLVVPGGLTPVVYRLNLRDT
HHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHCCCCCCEEECCCCCEEEEEEECCCC
NSLFVAQHFPIFNRDVIYVTNAPITDVQKAMQIFVLVSSPATTGASLYTSMK
CCEEEEECCCCCCCCEEEEECCCHHHHHHHEEEEEEEECCCCCCCCEEECCC
>Mature Secondary Structure 
TGRGWSPQCAMVSGVGIGDGTFMRKVSGWPLLLPAVALSLSGCESLPQVGPNAQEVVSQ
CCCCCCCCEEEEEECCCCCCHHHHHCCCCCEEHHHHHHHHHCHHHHHCCCCCHHHHHHH
SVEQNTQRYEVVDIDNAVLDVVRLRAQDTLYTSFGHSGPARSPLVGVGDFVAVNIWEAGA
HHHCCCCEEEEEECCHHHHHHHHHHHHHHEEECCCCCCCCCCCCEECCCEEEEEEEECCC
GGLFSAPVVAGSFTTGSKTATIPDQVVKPSGTISIPYAGEVQAAGRTTEAIQDEIVKALT
CCCEECCEEEECCCCCCCCCCCCHHHCCCCCCEECCCCCCEECCCCHHHHHHHHHHHHHC
GKAIQPQVLVTVTKPVSSTVTVTGEVVQGARVPLTAKGDRLLDVIATAGGVRAPVNETFI
CCCCCCEEEEEEECCCCCEEEEEHHHHCCCCCEEEECCCHHHHHHHCCCCCCCCCCCEEE
QLSRGNRTVRVSMERVVSDPRENVFMQPGDVLTVVRDPQVFLAYGATGANAEVPFNSSGI
EEECCCEEEEEEHHHHHCCCCCCEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCC
TLATALVKAGGLQDNRSDPSGVFVIRYEPEFIARKLRPGSPLVVPGGLTPVVYRLNLRDT
HHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHCCCCCCEEECCCCCEEEEEEECCCC
NSLFVAQHFPIFNRDVIYVTNAPITDVQKAMQIFVLVSSPATTGASLYTSMK
CCEEEEECCCCCCCCEEEEECCCHHHHHHHEEEEEEEECCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1659649; 1371768; 10710307 [H]