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The map label for this gene is spsC [H]

Identifier: 158338850

GI number: 158338850

Start: 5843526

End: 5844671

Strand: Direct

Name: spsC [H]

Synonym: AM1_5763

Alternate gene names: 158338850

Gene position: 5843526-5844671 (Clockwise)

Preceding gene: 158338849

Following gene: 158338851

Centisome position: 89.85

GC content: 46.86

Gene sequence:

>1146_bases
ATGACAGAGCACCGCAATATTCCCATCTCACTACCATCAACGGGTGAAGAAGAATGGTTAGCGTTGAAAGAGCCTCTACT
GTCTGGTTGGTTAACTCAAGGCCCTAAAGTTGCCGCTTTTGAAGCAGATTTTGCGAAGCGACATGGAGTCAAACATGCGG
TCGCAACTACAAGTTGTACAACATCACTCCACTTAATCTTGACAGCCTTGGATATTGGCCCTGGTGATGAGGTAATTGTG
CCAGCGTTTACTTGGGTCTCTACTGCAAATGTGGTTTTGTATTGCGGAGCTACACCTATTTTTGCTGATGTTGACCCTAA
GACCTATAACTTAGCCATTGATCAAGTCGCCAATAAAATAACTGAACGGACAAAAGCGATTTTGCCTGTCCATTTATTCG
GACGCTGTGCCGATATGGATGCTTTAGCAGAACTCGCTCCTAATATTCCTTTGGTGGAAGATGCGGCTTGTGCAGCTGGG
GCAGCTTATAAGGGTAGAGCTGCTGGATCCCTTGGAATAGCAGGAGCCTTCTCATTCCATCCTCGCAAATCAATTACGAC
GGGTGAAGGGGGCATGGTTACTACTAATGATGATGCCTTGGCAGATCGCATGCGAATCATTCGCAACCATGGTGCCAGTA
TTTCAGAAGAACAGCGTCATTTGGGTCCTAAACCTTATATTTTGCCTGAATTTAACCTGCTAGGGTTTAACTATCGGATG
ACGGATCTCCAGGGTGCAGTTGGTTTGGTGCAGTTGCAAAAACTGGATGGTTTGTTAGAGGAACGTCGGCAGTGGGCAGA
ATATTACAGCCGTGAGTTGGCTTCAATTAAATGGTTAAGGACGCCTCAGGTTACTGAGGAGTATTCCCATGGTTGGCAGG
CCTATGTGTGCTTTGTTGATGAGACGGTTGCACCGCGGCCTCGAAATTCAATGATGGAGTTCCTTCAATCTAAAGGGGTT
AGTACTCGGCCAGGTACTCATGCGGTGCATTTATTGGGGTATTACAAAGATCGATTTGGTCTTGCTCCAGAGGATTTTCC
TGGAGCAAGAGATTGCGATCGCTTCACGCTAGCATTGCCCCTTCATAATCAAATGACTGCGTCCGACTATAGATATGTGG
TGGCAGCCCTCAAGGAGCTGGAGTAA

Upstream 100 bases:

>100_bases
CTAAAGTCCAACTTCGCGAAGGATTAGAGCGGTTAATTGTTTGGCGGAACCAGCATAAAGAGATTGTGGCCCAAAAACGA
GAACATGCAGGAGTATTGGG

Downstream 100 bases:

>100_bases
TCTATGTGCGGTATAGCAGGGCTGATCCATATTAATGGTGATCCCGTCTCTCCGGTGATTTTGCAGCACATGACTGATGC
GATTGCCCATCGTGGCCCTG

Product: DegT/DnrJ/EryC1/StrS aminotransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTEHRNIPISLPSTGEEEWLALKEPLLSGWLTQGPKVAAFEADFAKRHGVKHAVATTSCTTSLHLILTALDIGPGDEVIV
PAFTWVSTANVVLYCGATPIFADVDPKTYNLAIDQVANKITERTKAILPVHLFGRCADMDALAELAPNIPLVEDAACAAG
AAYKGRAAGSLGIAGAFSFHPRKSITTGEGGMVTTNDDALADRMRIIRNHGASISEEQRHLGPKPYILPEFNLLGFNYRM
TDLQGAVGLVQLQKLDGLLEERRQWAEYYSRELASIKWLRTPQVTEEYSHGWQAYVCFVDETVAPRPRNSMMEFLQSKGV
STRPGTHAVHLLGYYKDRFGLAPEDFPGARDCDRFTLALPLHNQMTASDYRYVVAALKELE

Sequences:

>Translated_381_residues
MTEHRNIPISLPSTGEEEWLALKEPLLSGWLTQGPKVAAFEADFAKRHGVKHAVATTSCTTSLHLILTALDIGPGDEVIV
PAFTWVSTANVVLYCGATPIFADVDPKTYNLAIDQVANKITERTKAILPVHLFGRCADMDALAELAPNIPLVEDAACAAG
AAYKGRAAGSLGIAGAFSFHPRKSITTGEGGMVTTNDDALADRMRIIRNHGASISEEQRHLGPKPYILPEFNLLGFNYRM
TDLQGAVGLVQLQKLDGLLEERRQWAEYYSRELASIKWLRTPQVTEEYSHGWQAYVCFVDETVAPRPRNSMMEFLQSKGV
STRPGTHAVHLLGYYKDRFGLAPEDFPGARDCDRFTLALPLHNQMTASDYRYVVAALKELE
>Mature_380_residues
TEHRNIPISLPSTGEEEWLALKEPLLSGWLTQGPKVAAFEADFAKRHGVKHAVATTSCTTSLHLILTALDIGPGDEVIVP
AFTWVSTANVVLYCGATPIFADVDPKTYNLAIDQVANKITERTKAILPVHLFGRCADMDALAELAPNIPLVEDAACAAGA
AYKGRAAGSLGIAGAFSFHPRKSITTGEGGMVTTNDDALADRMRIIRNHGASISEEQRHLGPKPYILPEFNLLGFNYRMT
DLQGAVGLVQLQKLDGLLEERRQWAEYYSRELASIKWLRTPQVTEEYSHGWQAYVCFVDETVAPRPRNSMMEFLQSKGVS
TRPGTHAVHLLGYYKDRFGLAPEDFPGARDCDRFTLALPLHNQMTASDYRYVVAALKELE

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=381, Percent_Identity=38.5826771653543, Blast_Score=244, Evalue=9e-66,
Organism=Escherichia coli, GI2367285, Length=383, Percent_Identity=32.8981723237598, Blast_Score=157, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41972; Mature: 41841

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHRNIPISLPSTGEEEWLALKEPLLSGWLTQGPKVAAFEADFAKRHGVKHAVATTSCT
CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCHHHHHHHHHH
TSLHLILTALDIGPGDEVIVPAFTWVSTANVVLYCGATPIFADVDPKTYNLAIDQVANKI
HHHEEEEEEEECCCCCCEEEEEEHHCCCCCEEEEECCCCEEECCCCCEEEEEHHHHHHHH
TERTKAILPVHLFGRCADMDALAELAPNIPLVEDAACAAGAAYKGRAAGSLGIAGAFSFH
HHHHHHEEEHHHHHCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCC
PRKSITTGEGGMVTTNDDALADRMRIIRNHGASISEEQRHLGPKPYILPEFNLLGFNYRM
CCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEECCCCEEEECEEEE
TDLQGAVGLVQLQKLDGLLEERRQWAEYYSRELASIKWLRTPQVTEEYSHGWQAYVCFVD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCCCEEEEEEEE
ETVAPRPRNSMMEFLQSKGVSTRPGTHAVHLLGYYKDRFGLAPEDFPGARDCDRFTLALP
CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCEEEEEE
LHNQMTASDYRYVVAALKELE
CCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEHRNIPISLPSTGEEEWLALKEPLLSGWLTQGPKVAAFEADFAKRHGVKHAVATTSCT
CCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCHHHHHHHHHH
TSLHLILTALDIGPGDEVIVPAFTWVSTANVVLYCGATPIFADVDPKTYNLAIDQVANKI
HHHEEEEEEEECCCCCCEEEEEEHHCCCCCEEEEECCCCEEECCCCCEEEEEHHHHHHHH
TERTKAILPVHLFGRCADMDALAELAPNIPLVEDAACAAGAAYKGRAAGSLGIAGAFSFH
HHHHHHEEEHHHHHCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCC
PRKSITTGEGGMVTTNDDALADRMRIIRNHGASISEEQRHLGPKPYILPEFNLLGFNYRM
CCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEECCCCEEEECEEEE
TDLQGAVGLVQLQKLDGLLEERRQWAEYYSRELASIKWLRTPQVTEEYSHGWQAYVCFVD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCCCEEEEEEEE
ETVAPRPRNSMMEFLQSKGVSTRPGTHAVHLLGYYKDRFGLAPEDFPGARDCDRFTLALP
CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCEEEEEE
LHNQMTASDYRYVVAALKELE
CCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]