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The map label for this gene is 158338835

Identifier: 158338835

GI number: 158338835

Start: 5825846

End: 5827009

Strand: Direct

Name: 158338835

Synonym: AM1_5748

Alternate gene names: NA

Gene position: 5825846-5827009 (Clockwise)

Preceding gene: 158338834

Following gene: 158338836

Centisome position: 89.58

GC content: 48.63

Gene sequence:

>1164_bases
ATGTTATCGGCATTTCAATTCAAACTTCATCGCTATCTGCCGTTCTGTACGGGATGCTTATCCCTGCTGCTGTCTTTGGT
TGCGAGTCCTGCGATCGCATTAGAGTTACGCATCGCTCTATTACAAGGGCAGGGGGATGTCGTGATCGGGAGTTCCACCT
CTGCCAACATCGTCAATGGCCAAGGAACAACGGTAGGCGCGCTACCCCCCTTAGAAGGGTTCTTTGCCAAATCCACTCCC
GGGGCCGTCACTTTTTTTGGCAAAAAGGGATGGCAGCTCTCCATTGAACCCTCGGAAGGTGGTTTTGTGTACATCCAAGA
TCGATGGTATCGAGGTCAAGTCCGCTTAGTTACCACATCCCAAGGTATCTCAGTGATTAATGAAGTGGATTTAGAGGACT
ATCTGGCAGGCGTTATTGGCAAAGAGATGCCTAGAACGTGGCCCCAGGAAGCCTTAAAGGCTCAATCTGTAGCAGCCCGA
TCCTTCGCCCTATATCGAAAGGGCAAACAGAAAAATCCGCTTTACGATTTGGTTAATACCACCAAAGATCAGGTTTATGG
GGGCATTGATGGCGAAGCCGAGAGTACAAGAGCTGCAGTCCGAGCTACAGCGGGGCAAGTGTTGACCTATCAAGGCAATA
TCGTTGAAGCCTTGTTCCATGCGAATTCTGGTGGCCATACGGAGAATTCTGAGCAAGTATTTAGTGGCGTTATTCCCTAC
TTGAGAGGTGTTCCCGATTTTGATCAAGAAGCGCCTAATTTTCAATGGTCTGTGAACTTTTCTCAAGCACAACTGCAGCA
AAAACTATCGGGACTGGGTAATATTCTTGCAATGACTCCTCAAGGGACCACAGCCCATGGTCGTGTCAAACGCATCAAAA
TTGTCGGAGAGCAAGGGACAAAAATAATGAAGGGGCGTGAATTTCGCCGAGCCCTGAAGTTAAAAAGCACCTTATTTCAA
GTTGTTCCCCAATCTGATTTAGTGGCGAGTCAAGCTCAAGCTGTGCCCAGTAAGCCCTCCGGCTTCACCATTAACGGTCG
TGGTCATGGCCATGGGTTAGGGATGAGCCAGTGGGGCGCTTTAGCCCTTGCCCAGCGAGGAAATACCTACCAGCAGATTT
TGCAACATTATTACAAAAACACTGTTCTCCAAACCTCCTATTGA

Upstream 100 bases:

>100_bases
GTATGATGTCAAACTCCTTTTAGGGCAAGGGGGACTAGACCCTCGGTTTTCAGTGCCATTCCTGGTTGCGTTGCTCAATT
TCTCAGTTCATCATTGGCTT

Downstream 100 bases:

>100_bases
CAGTAGGAACTCAATCCTTGAATCCATTTGTCAATAGGATCCGCGCCATTCATTTCTATTAGCAGCACAGTTGAATCACA
CATAGGATAAATTTCATGGC

Product: SpoIID/LytB domain-containing protein

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MLSAFQFKLHRYLPFCTGCLSLLLSLVASPAIALELRIALLQGQGDVVIGSSTSANIVNGQGTTVGALPPLEGFFAKSTP
GAVTFFGKKGWQLSIEPSEGGFVYIQDRWYRGQVRLVTTSQGISVINEVDLEDYLAGVIGKEMPRTWPQEALKAQSVAAR
SFALYRKGKQKNPLYDLVNTTKDQVYGGIDGEAESTRAAVRATAGQVLTYQGNIVEALFHANSGGHTENSEQVFSGVIPY
LRGVPDFDQEAPNFQWSVNFSQAQLQQKLSGLGNILAMTPQGTTAHGRVKRIKIVGEQGTKIMKGREFRRALKLKSTLFQ
VVPQSDLVASQAQAVPSKPSGFTINGRGHGHGLGMSQWGALALAQRGNTYQQILQHYYKNTVLQTSY

Sequences:

>Translated_387_residues
MLSAFQFKLHRYLPFCTGCLSLLLSLVASPAIALELRIALLQGQGDVVIGSSTSANIVNGQGTTVGALPPLEGFFAKSTP
GAVTFFGKKGWQLSIEPSEGGFVYIQDRWYRGQVRLVTTSQGISVINEVDLEDYLAGVIGKEMPRTWPQEALKAQSVAAR
SFALYRKGKQKNPLYDLVNTTKDQVYGGIDGEAESTRAAVRATAGQVLTYQGNIVEALFHANSGGHTENSEQVFSGVIPY
LRGVPDFDQEAPNFQWSVNFSQAQLQQKLSGLGNILAMTPQGTTAHGRVKRIKIVGEQGTKIMKGREFRRALKLKSTLFQ
VVPQSDLVASQAQAVPSKPSGFTINGRGHGHGLGMSQWGALALAQRGNTYQQILQHYYKNTVLQTSY
>Mature_387_residues
MLSAFQFKLHRYLPFCTGCLSLLLSLVASPAIALELRIALLQGQGDVVIGSSTSANIVNGQGTTVGALPPLEGFFAKSTP
GAVTFFGKKGWQLSIEPSEGGFVYIQDRWYRGQVRLVTTSQGISVINEVDLEDYLAGVIGKEMPRTWPQEALKAQSVAAR
SFALYRKGKQKNPLYDLVNTTKDQVYGGIDGEAESTRAAVRATAGQVLTYQGNIVEALFHANSGGHTENSEQVFSGVIPY
LRGVPDFDQEAPNFQWSVNFSQAQLQQKLSGLGNILAMTPQGTTAHGRVKRIKIVGEQGTKIMKGREFRRALKLKSTLFQ
VVPQSDLVASQAQAVPSKPSGFTINGRGHGHGLGMSQWGALALAQRGNTYQQILQHYYKNTVLQTSY

Specific function: Might be involved in sporulation [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 42056; Mature: 42056

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAFQFKLHRYLPFCTGCLSLLLSLVASPAIALELRIALLQGQGDVVIGSSTSANIVNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEECCCCCEEECC
QGTTVGALPPLEGFFAKSTPGAVTFFGKKGWQLSIEPSEGGFVYIQDRWYRGQVRLVTTS
CCCEEECCCCCCCHHCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECEEECEEEEEEEC
QGISVINEVDLEDYLAGVIGKEMPRTWPQEALKAQSVAARSFALYRKGKQKNPLYDLVNT
CCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC
TKDQVYGGIDGEAESTRAAVRATAGQVLTYQGNIVEALFHANSGGHTENSEQVFSGVIPY
CHHHEECCCCCCCHHHHHHHHHCCCCEEEECCCCEEHHHCCCCCCCCCCHHHHHHHHHHH
LRGVPDFDQEAPNFQWSVNFSQAQLQQKLSGLGNILAMTPQGTTAHGRVKRIKIVGEQGT
HCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCC
KIMKGREFRRALKLKSTLFQVVPQSDLVASQAQAVPSKPSGFTINGRGHGHGLGMSQWGA
HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHH
LALAQRGNTYQQILQHYYKNTVLQTSY
HHHHHCCCHHHHHHHHHHHCCEEECCC
>Mature Secondary Structure
MLSAFQFKLHRYLPFCTGCLSLLLSLVASPAIALELRIALLQGQGDVVIGSSTSANIVNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEECCCCCEEECC
QGTTVGALPPLEGFFAKSTPGAVTFFGKKGWQLSIEPSEGGFVYIQDRWYRGQVRLVTTS
CCCEEECCCCCCCHHCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECEEECEEEEEEEC
QGISVINEVDLEDYLAGVIGKEMPRTWPQEALKAQSVAARSFALYRKGKQKNPLYDLVNT
CCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC
TKDQVYGGIDGEAESTRAAVRATAGQVLTYQGNIVEALFHANSGGHTENSEQVFSGVIPY
CHHHEECCCCCCCHHHHHHHHHCCCCEEEECCCCEEHHHCCCCCCCCCCHHHHHHHHHHH
LRGVPDFDQEAPNFQWSVNFSQAQLQQKLSGLGNILAMTPQGTTAHGRVKRIKIVGEQGT
HCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCC
KIMKGREFRRALKLKSTLFQVVPQSDLVASQAQAVPSKPSGFTINGRGHGHGLGMSQWGA
HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHH
LALAQRGNTYQQILQHYYKNTVLQTSY
HHHHHCCCHHHHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA